Factsheet for VIT_00s1682g00020.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0094g01220.t01	Wine grape	cytosol	51.19	83.91
VIT_05s0094g01190.t01	Wine grape	cytosol	50.13	74.12
VIT_16s0022g01540.t01	Wine grape	cytosol	35.28	59.38
VIT_05s0094g01180.t01	Wine grape	cytosol	52.52	53.51
VIT_05s0094g01170.t01	Wine grape	cytosol	15.65	52.21
VIT_00s0555g00010.t01	Wine grape	cytosol	18.04	51.91
Os08t0547900-01	Rice	plasma membrane	46.15	45.91
PGSC0003DMT400044122	Potato	extracellular	55.7	40.78
Solyc08g079420.2.1	Tomato	endoplasmic reticulum	54.91	40.43
PGSC0003DMT400049084	Potato	cytosol	7.69	40.28
Os01t0700500-01	Rice	cytosol	45.09	39.91
PGSC0003DMT400010109	Potato	endoplasmic reticulum	54.38	39.65
PGSC0003DMT400044123	Potato	cytosol, mitochondrion	19.36	37.63
VIT_00s0555g00020.t01	Wine grape	golgi	52.79	37.55
VIT_16s0022g01500.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, mitochondrion	52.25	36.89
GSMUA_AchrUn_...	Banana	cytosol	20.42	36.15
Zm00001d039698_P002	Maize	endoplasmic reticulum	47.75	35.16
EES14120	Sorghum	endoplasmic reticulum	47.75	34.03
Zm00001d032035_P001	Maize	endoplasmic reticulum	46.15	33.59
KRH50374	Soybean	endoplasmic reticulum, plasma membrane	47.21	33.52
HORVU3Hr1G013490.1	Barley	cytosol, endoplasmic reticulum, plastid	46.15	32.1
VIT_16s0022g01390.t01	Wine grape	mitochondrion	47.75	31.69
HORVU7Hr1G057280.2	Barley	mitochondrion	47.21	29.37
TraesCS7A01G271200.1	Wheat	mitochondrion, plastid	46.68	29.14
TraesCS7D01G271600.2	Wheat	plastid	46.42	29.02
TraesCS7B01G169500.1	Wheat	plastid	46.42	28.97
VIT_16s0022g01510.t01	Wine grape	cytosol	51.19	20.51
VIT_05s0094g01200.t01	Wine grape	endoplasmic reticulum	1.06	2.35

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:100242139	wikigene:100242139	MapMan:50.1.13	ProteinID:CCB50226	ProteinID:CCB50226.1
InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	UniProt:F6HDD1	EMBL:FN595658
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0016705	GO:GO:0016709	GO:GO:0019748	GO:GO:0020037	GO:GO:0044550	GO:GO:0046872
GO:GO:0055114	InterPro:IPR036396	EntrezGene:LOC100242139	wikigene:LOC100242139	PFAM:PF00067	PRINTS:PR00385
PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF136	SUPFAM:SSF48264	UniParc:UPI0002107F19
ArrayExpress:VIT_00s1682g00020	EnsemblPlantsGene:VIT_00s1682g00020	EnsemblPlants:VIT_00s1682g00020.t01	unigene:Vvi.15684	RefSeq:XP_002263737	RefSeq:XP_002263737.2

Description

No Description!

Coordinates

chrUn:-:40150170..40152129

Molecular Weight (calculated)

43333.6 Da

IEP (calculated)

8.066

GRAVY (calculated)

-0.320

Length

377 amino acids

Sequence
(BLAST)

001: MLSNNILDRC HAHRRYEVRK TITNVYNKIG TPMDFGKLSF QTELNVMTWS MWGNTIEGLE DSVTGVSFRE LSNEVMRLLG KTNISDFFPV LARFDIQGVE
101: REMKKVFLSV DQILDHIIEQ RMKLDTAKEK RASNNREEKD FLQFLLDVKE QEATETPITR TQIKALLLDI LVGGTDTTAT TIEWAMAEMM SNPETMRKAQ
201: EELADVVGMT NIVEESHLPK LKYMDAVMKE TLRLRPAIAV LVPKRPSQSC TVGGYTVPKG TKVFLNVWAM HRDPKYWDNP SEFKPERFLT DSSRWDYRGN
301: NFQYLPFGSG RRVCPGIPLA ERMLIYLLAS LLHSFDWQLI TKGEDLDLSE QFGIVLKKRT PLIVIPTKRL PNSALYA

Best Arabidopsis Sequence Match ( AT4G12300.1 )
(BLAST)

001: MSPISNLFPD NTINLTPYAI VILTTVFSIL WYIFKRSPQP SLPPGPRGLP IVGNLPFLDP DLHTYFANLA QSHGPIFKLN LGSKLTIVVN SPSLAREILK
101: DQDINFSNRD VPLTGRAATY GGIDIVWTPY GAEWRQLRKI CVLKLLSRKT LDSFYELRRK EVRERTRYLY EQGRKQSPVK VGDQLFLTMM NLTMNMLWGG
201: SVKAEEMESV GTEFKGVISE ITRLLSEPNV SDFFPWLARF DLQGLVKRMG VCARELDAVL DRAIEQMKPL RGRDDDEVKD FLQYLMKLKD QEGDSEVPIT
301: INHVKALLTD MVVGGTDTST NTIEFAMAEL MSNPELIKRA QEELDEVVGK DNIVEESHIT RLPYILAIMK ETLRLHPTLP LLVPHRPAEN TVVGGYTIPK
401: DTKIFVNVWS IQRDPNVWEN PTEFRPERFL DNNSCDFTGA NYSYFPFGSG RRICAGVALA ERMVLYTLAT LLHSFDWKIP EGHVLDLKEK FGIVLKLKIP
501: LVALPIPRFS DSNLYL

Arabidopsis Description

CYP706A4Cytochrome P450, family 706, subfamily A, polypeptide 4 [Source:UniProtKB/TrEMBL;Acc:Q9STI1]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.