Factsheet for VIT_16s0022g01510.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0022g01500.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, mitochondrion	50.27	88.58
VIT_16s0022g01540.t01	Wine grape	cytosol	20.94	87.95
VIT_05s0094g01190.t01	Wine grape	cytosol	15.3	56.47
VIT_05s0094g01180.t01	Wine grape	cytosol	22.0	55.95
VIT_00s0555g00010.t01	Wine grape	cytosol	7.55	54.2
VIT_05s0094g01170.t01	Wine grape	cytosol	6.48	53.98
VIT_00s0555g00020.t01	Wine grape	golgi	29.65	52.64
VIT_00s1682g00020.t01	Wine grape	cytosol	20.51	51.19
Os08t0547900-01	Rice	plasma membrane	19.13	47.49
Os01t0700500-01	Rice	cytosol	21.15	46.71
Zm00001d032035_P001	Maize	endoplasmic reticulum	25.29	45.95
EES14120	Sorghum	endoplasmic reticulum	25.08	44.61
VIT_16s0022g01390.t01	Wine grape	mitochondrion	26.89	44.54
VIT_05s0094g01220.t01	Wine grape	cytosol	10.73	43.91
Zm00001d039698_P002	Maize	endoplasmic reticulum	23.8	43.75
HORVU3Hr1G013490.1	Barley	cytosol, endoplasmic reticulum, plastid	24.23	42.07
VIT_05s0094g01200.t01	Wine grape	endoplasmic reticulum	7.55	41.76
TraesCS7B01G169500.1	Wheat	plastid	26.35	41.06
HORVU7Hr1G057280.2	Barley	mitochondrion	26.35	40.92
TraesCS7D01G271600.2	Wheat	plastid	26.14	40.8
TraesCS7A01G271200.1	Wheat	mitochondrion, plastid	25.93	40.4

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:100853257	wikigene:100853257	MapMan:50.1.13	ProteinID:CCB49279	ProteinID:CCB49279.1
InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	UniProt:F6HAM2	EMBL:FN595506
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003723	GO:GO:0003824	GO:GO:0005488
GO:GO:0005506	GO:GO:0005515	GO:GO:0005575	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0008270	GO:GO:0008289	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016705	GO:GO:0016709	GO:GO:0019748	GO:GO:0020037	GO:GO:0035091	GO:GO:0044550
GO:GO:0046983	GO:GO:0055114	InterPro:IPR036396	EntrezGene:LOC100853257	wikigene:LOC100853257	PFAM:PF00067
PFAM:PF13966	PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF312
InterPro:RVT-Znf	SUPFAM:SSF48264	UniParc:UPI000210875E	ArrayExpress:VIT_16s0022g01510	EnsemblPlantsGene:VIT_16s0022g01510	EnsemblPlants:VIT_16s0022g01510.t01
RefSeq:XP_003634054	RefSeq:XP_003634054.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr16:-:13549389..13582228

Molecular Weight (calculated)

107513.0 Da

IEP (calculated)

6.174

GRAVY (calculated)

-0.076

Length

941 amino acids

Sequence
(BLAST)

001: MGCKWEAWVA DIWDPLAEGG WGGWNPCFLR AFNDWEVEEA ERFMERLQSK KVIEDVEDIV SWIETKSGKF SVKSLYVALE AGGSSLFPLS FIWNVNVQPK
101: ISFFAWEATW GKALTLDMVQ KRGWALANRC FMCLEKEENI NHLLFHCSRT RALWDLLFAL FGVSWVLSSS VRETLLSWNG FFLGKNRKKA WRAAPLHISW
201: TVWKERNRLA FKDESLSFQK LKHSFILTFW AEAKLFIDDC PLTIANFIDW TWSLLQQTTS TTVEWAMAEL LQHPQTMQKF QEELEQVVGI ENIVEESHLF
301: QLPYLDAVIK EALRLHPPLP LLIPHSPSTS CIISGYTIPK GSRILVNAWA MQRDPEAWGH PLEFKPERFL EDAASADYQG NNFNFLPFGS GRRICAGLPL
401: AERMLPYAAI WEDKGWSWWW DGLTENTIFR VVAALLTAAI AISWYAWLIK KANRGLPPLP PGPRGLPLLG NLLFIEPDLH RYFSKLSQLY GPIFKLQLGS
501: KTCIVINSSS VAKEILKDHD VIFANRDVPI SVLAFTYGGQ DIVWSHYSPE WRKLRKVFVQ EMMSSASLDA CSALRRREVQ EMVRDVYGKV GTTINMGDQM
601: FLTVLNVVTS MLWGGTLHGE DRSRIGMEFR RVIVETVELV GKPNISDLFP ALAWFDLQGI ESRAKKLVLW FDRIFESLIA QRTQVDGADG EGKNKSKESK
701: DFLQFMLELM HQGDDKTSVS ITQLKALFMD MVVAATDTTS TTVEWAMAEL LQHPQTMQKV QEELEQVVGI ENIVEESHLF QLPYLDAVIK EALRLHPPLP
801: LLIPHSPSTS CIISGYTIPK GSRILVNAWA MQRDPEAWGH PLEFKPERFL EDAASADYQG NNFNFLPFGS GRRICAGLPL LERMLPYVLA FLLHSFDWKL
901: LDGRTRVDFE ERLAIVSKKN EPLLAIPTAR LSNLCHYDPI E

Best Arabidopsis Sequence Match ( AT4G12320.1 )
(BLAST)

001: MSPISNLFAG NTINLTPYAI LILIAIFSIL WYLFKRSPQP HLPPGPRGLP IVGNLPFLDP DLHTYFTKLA ESYGPIFKLN LGSKLTVVVN TPSLAREILK
101: DQDINFSNHD VPLTARAVTY GGLDLVWLPY GAEWRMLRKV CVLKLLSHRT LNSFYELRRK EIRERTRYLY QKGQEESPVN VGEQVFLTMM NLTMNMLWGG
201: SVKAEEMESV GTEFKEVISE ITRLLGEPNV SDFFPRLARF DLQGLVKKMH VCARELDAIL DRAIEQMQLL RTRDGDDGEC KDFLQHLMKL KDQEADSEVP
301: ITVNHVKAVL VDLVVGGTDT STNTIEFAMA ELIRKPELMK RAQQELDEVV GKDNIIEESH ITRLPFISAI MKETLRLYPT IPLLVPHRPS ETALVGGYTI
401: PKNTKIFINV WSIQRDPNVW EYPTEFRPER FLDKKSCDFT GTDYSYLPFG SGRRICAGIA LAERMILYTL ATLLHSFDWK IPEGHILDLK EKFGIVLKLK
501: SPLVALPVPR LSNSNLYL

Arabidopsis Description

CYP706A6At4g12320 [Source:UniProtKB/TrEMBL;Acc:Q66GJ1]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.