Factsheet for VIT_16s0022g01540.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0555g00010.t01	Wine grape	cytosol	31.25	53.44
VIT_05s0094g01170.t01	Wine grape	cytosol	26.79	53.1
VIT_05s0094g01190.t01	Wine grape	cytosol	59.82	52.55
VIT_16s0022g01500.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, mitochondrion	97.77	41.01
VIT_00s1682g00020.t01	Wine grape	cytosol	59.38	35.28
VIT_05s0094g01180.t01	Wine grape	cytosol	57.59	34.86
Os08t0547900-01	Rice	plasma membrane	54.46	32.19
Os01t0700500-01	Rice	cytosol	53.57	28.17
VIT_00s0555g00020.t01	Wine grape	golgi	60.27	25.47
Zm00001d032035_P001	Maize	endoplasmic reticulum	54.46	23.55
Zm00001d039698_P002	Maize	endoplasmic reticulum	53.57	23.44
EES14120	Sorghum	endoplasmic reticulum	54.91	23.25
HORVU3Hr1G013490.1	Barley	cytosol, endoplasmic reticulum, plastid	55.36	22.88
VIT_16s0022g01390.t01	Wine grape	mitochondrion	57.14	22.54
VIT_16s0022g01510.t01	Wine grape	cytosol	87.95	20.94
HORVU7Hr1G057280.2	Barley	mitochondrion	54.46	20.13
TraesCS7B01G169500.1	Wheat	plastid	53.57	19.87
TraesCS7D01G271600.2	Wheat	plastid	53.12	19.73
TraesCS7A01G271200.1	Wheat	mitochondrion, plastid	53.12	19.7
VIT_05s0094g01220.t01	Wine grape	cytosol	18.3	17.83
VIT_05s0094g01200.t01	Wine grape	endoplasmic reticulum	0.0	0.0

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	ProteinID:CBI24532	ProteinID:CBI24532.3	InterPro:Cyt_P450	InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	UniProt:D7T242	EMBL:FN595506	GO:GO:0003674	GO:GO:0003824
GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0016020	GO:GO:0016491	GO:GO:0016705	GO:GO:0016709	GO:GO:0019748
GO:GO:0020037	GO:GO:0044550	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396	PFAM:PF00067
PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF312	SUPFAM:SSF48264
UniParc:UPI0001BE2557	ArrayExpress:VIT_16s0022g01540	EnsemblPlantsGene:VIT_16s0022g01540	EnsemblPlants:VIT_16s0022g01540.t01	SEG:seg	:

Description

No Description!

Coordinates

chr16:-:13618888..13620131

Molecular Weight (calculated)

25154.4 Da

IEP (calculated)

5.313

GRAVY (calculated)

-0.096

Length

224 amino acids

Sequence
(BLAST)

001: MHQGDDKTSV SITQLKALFM DIVVGATDTS SITVEWAMAE LLQHPQTMQK AQEELEKVVG NENIVEESHL FQLPYLDAVI KETLRLHPPL PLLVPHSPST
101: SCIISGYTIP KGSRILFNAW AMQRNPEVWE HPLEFIPERF LEDAASADYK GNNFNFMPFG SGRRICAGLP LAEKMLLYVL ASLLHSFDWK LPDGRTSVDL
201: EERFGIVLKK SEPLLAIPTA RLSN

Best Arabidopsis Sequence Match ( AT4G12300.1 )
(BLAST)

001: MSPISNLFPD NTINLTPYAI VILTTVFSIL WYIFKRSPQP SLPPGPRGLP IVGNLPFLDP DLHTYFANLA QSHGPIFKLN LGSKLTIVVN SPSLAREILK
101: DQDINFSNRD VPLTGRAATY GGIDIVWTPY GAEWRQLRKI CVLKLLSRKT LDSFYELRRK EVRERTRYLY EQGRKQSPVK VGDQLFLTMM NLTMNMLWGG
201: SVKAEEMESV GTEFKGVISE ITRLLSEPNV SDFFPWLARF DLQGLVKRMG VCARELDAVL DRAIEQMKPL RGRDDDEVKD FLQYLMKLKD QEGDSEVPIT
301: INHVKALLTD MVVGGTDTST NTIEFAMAEL MSNPELIKRA QEELDEVVGK DNIVEESHIT RLPYILAIMK ETLRLHPTLP LLVPHRPAEN TVVGGYTIPK
401: DTKIFVNVWS IQRDPNVWEN PTEFRPERFL DNNSCDFTGA NYSYFPFGSG RRICAGVALA ERMVLYTLAT LLHSFDWKIP EGHVLDLKEK FGIVLKLKIP
501: LVALPIPRFS DSNLYL

Arabidopsis Description

CYP706A4Cytochrome P450, family 706, subfamily A, polypeptide 4 [Source:UniProtKB/TrEMBL;Acc:Q9STI1]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.