Factsheet for Solyc08g079420.2.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 1
extracellular 4
endoplasmic reticulum 7
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400010109	Potato	endoplasmic reticulum	87.89	87.04
PGSC0003DMT400044123	Potato	cytosol, mitochondrion	31.25	82.47
VIT_05s0094g01190.t01	Wine grape	cytosol	31.45	63.14
VIT_00s1682g00020.t01	Wine grape	cytosol	40.43	54.91
VIT_05s0094g01200.t01	Wine grape	endoplasmic reticulum	16.99	51.18
KRH50374	Soybean	endoplasmic reticulum, plasma membrane	50.78	48.96
VIT_05s0094g01220.t01	Wine grape	cytosol	20.9	46.52
Os01t0700500-01	Rice	cytosol	38.28	46.01
Solyc08g079330.1.1	Tomato	endoplasmic reticulum, golgi, plastid	46.09	45.3
Solyc08g083500.1.1	Tomato	endoplasmic reticulum, plasma membrane	46.09	45.3
Solyc08g083510.1.1	Tomato	endoplasmic reticulum, plasma membrane	45.9	45.11
Solyc08g083410.1.1	Tomato	endoplasmic reticulum, golgi	45.7	44.91
Zm00001d039698_P002	Maize	endoplasmic reticulum	44.73	44.73
Os08t0547900-01	Rice	plasma membrane	33.01	44.59
Solyc08g079370.1.1	Tomato	endoplasmic reticulum, golgi	44.92	44.15
Solyc08g083520.1.1	Tomato	endoplasmic reticulum, plasma membrane	44.92	43.98
EES14120	Sorghum	endoplasmic reticulum	45.31	43.86
Zm00001d032035_P001	Maize	endoplasmic reticulum	44.34	43.82
Solyc08g079350.1.1	Tomato	endoplasmic reticulum, plasma membrane	43.75	42.83
HORVU3Hr1G013490.1	Barley	cytosol, endoplasmic reticulum, plastid	45.12	42.62
HORVU7Hr1G057280.2	Barley	mitochondrion	44.14	37.29
TraesCS7A01G271200.1	Wheat	mitochondrion, plastid	43.75	37.09
TraesCS7B01G169500.1	Wheat	plastid	43.75	37.09
TraesCS7D01G271600.2	Wheat	plastid	43.55	36.98
Solyc08g079300.2.1	Tomato	plastid	24.02	23.12
Solyc08g079280.2.1	Tomato	endoplasmic reticulum, golgi, plastid	23.05	22.52
Solyc08g079310.2.1	Tomato	endoplasmic reticulum	21.48	21.36

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0016705	GO:GO:0016709	GO:GO:0019748	GO:GO:0020037	GO:GO:0044550	GO:GO:0046872
GO:GO:0055114	InterPro:IPR036396	UniProt:K4CNU2	PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00463
ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF312	SUPFAM:SSF48264	EnsemblPlantsGene:Solyc08g079420.2	EnsemblPlants:Solyc08g079420.2.1
TMHMM:TMhelix	UniParc:UPI000276B106	:	:	:	:

Description

No Description!

Coordinates

chr8:+:62952494..62954898

Molecular Weight (calculated)

58002.0 Da

IEP (calculated)

6.658

GRAVY (calculated)

-0.058

Length

512 amino acids

Sequence
(BLAST)

001: MASAPLNDLW IAALTVSIVF LTILWYKLNK VESNLPPGPR GLPIVGFLPF LRANLHHQLT ELSQQYGPIY KFWLGGKLCV VLNSPSLAKE VVRDQDSIFA
101: NRDPPIAGLV ATYGGLDIGF SPYGSYWRDM RKLFVREMLS NRNLESCYSL RRQEVRKTIK NVHTKIGSLT DIGELAFVTE MNVIMSMIFG SNFVEEMEKH
201: GTEFRELVIK YPQILGRPNI SDFFPMLARF DLQGIQKDAE ALLKSVESIL DPAINEHLKM LSDRREGEIQ GNEKKDFIQI LLELMEQKDI GISLDLVKIK
301: AILVDIVIGG TDSTITTIEW VMTELLNNPE TMSKVQQELK HVVGMNNIVE ESHLPELHYL DAVIKETLRL HPALPLLIPK RPSQSAIVGG YTIPEGTKVF
401: LNVYAIHRDP HAWESPLEFQ PERFLNRSTN LDYAGNNMKY LPFGSGRRIC AGLPLAEKMI MFMLASLLHS FDWKLPEGEN VDLSEGFGLV IKKSKRLFAI
501: PTPKLPNLDL YQ

Best Arabidopsis Sequence Match ( AT4G12300.1 )
(BLAST)

001: MSPISNLFPD NTINLTPYAI VILTTVFSIL WYIFKRSPQP SLPPGPRGLP IVGNLPFLDP DLHTYFANLA QSHGPIFKLN LGSKLTIVVN SPSLAREILK
101: DQDINFSNRD VPLTGRAATY GGIDIVWTPY GAEWRQLRKI CVLKLLSRKT LDSFYELRRK EVRERTRYLY EQGRKQSPVK VGDQLFLTMM NLTMNMLWGG
201: SVKAEEMESV GTEFKGVISE ITRLLSEPNV SDFFPWLARF DLQGLVKRMG VCARELDAVL DRAIEQMKPL RGRDDDEVKD FLQYLMKLKD QEGDSEVPIT
301: INHVKALLTD MVVGGTDTST NTIEFAMAEL MSNPELIKRA QEELDEVVGK DNIVEESHIT RLPYILAIMK ETLRLHPTLP LLVPHRPAEN TVVGGYTIPK
401: DTKIFVNVWS IQRDPNVWEN PTEFRPERFL DNNSCDFTGA NYSYFPFGSG RRICAGVALA ERMVLYTLAT LLHSFDWKIP EGHVLDLKEK FGIVLKLKIP
501: LVALPIPRFS DSNLYL

Arabidopsis Description

CYP706A4Cytochrome P450, family 706, subfamily A, polypeptide 4 [Source:UniProtKB/TrEMBL;Acc:Q9STI1]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.