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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 2
  • golgi 2
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
MultiLoc:golgi
Plant-mPloc:endoplasmic reticulum
Predotar:mitochondrion
PProwler:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
plastid: 22908117
msms PMID: 22908117 doi
C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech
Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc08g079280.2.1 Tomato endoplasmic reticulum, golgi, plastid 82.89 84.16
Solyc08g079310.2.1 Tomato endoplasmic reticulum 78.57 81.17
CDY72661 Canola endoplasmic reticulum, plasma membrane 21.62 46.0
Bra020678.1-P Field mustard endoplasmic reticulum, plasma membrane 21.8 42.65
Solyc08g079330.1.1 Tomato endoplasmic reticulum, golgi, plastid 40.79 41.65
Solyc08g079350.1.1 Tomato endoplasmic reticulum, plasma membrane 40.23 40.92
Solyc08g083410.1.1 Tomato endoplasmic reticulum, golgi 39.66 40.5
Solyc08g083520.1.1 Tomato endoplasmic reticulum, plasma membrane 39.29 39.96
Solyc08g083510.1.1 Tomato endoplasmic reticulum, plasma membrane 39.1 39.92
Solyc08g079370.1.1 Tomato endoplasmic reticulum, golgi 39.1 39.92
Solyc08g083500.1.1 Tomato endoplasmic reticulum, plasma membrane 37.41 38.2
PGSC0003DMT400012194 Potato plastid 90.79 35.26
VIT_00s0555g00020.t01 Wine grape golgi 33.46 33.58
KRH04015 Soybean endoplasmic reticulum, extracellular 29.89 31.12
KRH04014 Soybean endoplasmic reticulum 28.76 29.59
Bra033755.1-P Field mustard extracellular, plasma membrane 24.62 28.6
AT5G44620.1 Thale cress golgi 26.13 26.78
AT4G12320.1 Thale cress endoplasmic reticulum 25.94 26.64
CDX86715 Canola endoplasmic reticulum 25.75 26.55
Bra029445.1-P Field mustard endoplasmic reticulum 25.56 26.41
Zm00001d032035_P001 Maize endoplasmic reticulum 25.56 26.25
CDY49024 Canola cytosol, endoplasmic reticulum, nucleus 24.44 26.21
Bra000768.1-P Field mustard endoplasmic reticulum, extracellular 24.81 26.19
CDX94508 Canola endoplasmic reticulum, plasma membrane 25.38 26.16
CDY04419 Canola endoplasmic reticulum, plasma membrane 25.38 26.16
AT4G12330.1 Thale cress endoplasmic reticulum 25.38 26.06
CDY70590 Canola endoplasmic reticulum, extracellular 24.06 26.02
CDX97347 Canola endoplasmic reticulum, plasma membrane 25.19 25.97
CDX90825 Canola endoplasmic reticulum 25.19 25.97
Bra000769.1-P Field mustard endoplasmic reticulum 25.19 25.97
AT4G12300.1 Thale cress endoplasmic reticulum 25.19 25.97
Bra018471.1-P Field mustard endoplasmic reticulum, plasma membrane 25.0 25.78
CDY65737 Canola extracellular, plasma membrane 25.0 25.68
AT4G12310.1 Thale cress endoplasmic reticulum, plasma membrane 25.0 25.58
Zm00001d039698_P002 Maize endoplasmic reticulum 24.44 25.39
CDX90826 Canola endoplasmic reticulum 24.62 25.39
EES14120 Sorghum endoplasmic reticulum 25.19 25.33
CDY21266 Canola endoplasmic reticulum 24.62 24.67
HORVU3Hr1G013490.1 Barley cytosol, endoplasmic reticulum, plastid 24.81 24.35
CDX94112 Canola cytosol, endoplasmic reticulum 20.11 24.15
Solyc08g079420.2.1 Tomato endoplasmic reticulum 23.12 24.02
TraesCS7A01G271200.1 Wheat mitochondrion, plastid 26.88 23.68
HORVU7Hr1G057280.2 Barley mitochondrion 26.88 23.6
TraesCS7D01G271600.2 Wheat plastid 26.69 23.55
TraesCS7B01G169500.1 Wheat plastid 26.69 23.51
Bra019366.1-P Field mustard endoplasmic reticulum 23.12 23.43
CDX76357 Canola endoplasmic reticulum, plasma membrane, plastid 19.55 23.06
CDX82959 Canola cytosol 22.18 23.05
Bra020836.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid 21.43 23.03
Os01t0700500-01 Rice cytosol 18.42 23.0
CDY64317 Canola cytosol 22.18 23.0
VIT_05s0094g01180.t01 Wine grape cytosol 15.79 22.7
CDX79171 Canola cytosol 21.8 22.66
Bra013634.1-P Field mustard endoplasmic reticulum 21.99 22.33
AT4G22710.1 Thale cress endoplasmic reticulum 21.99 22.24
CDY42189 Canola endoplasmic reticulum 21.8 22.14
AT4G22690.1 Thale cress plastid 21.24 20.29
Os08t0547900-01 Rice plasma membrane 13.16 18.47
CDY21265 Canola cytosol 6.77 11.29
Bra020679.1-P Field mustard cytosol 2.26 5.02
CDY33945 Canola cytosol 0.56 1.61
KRH57291 Soybean cytosol 0.0 0.0
VIT_00s0555g00010.t01 Wine grape cytosol 0.0 0.0
VIT_05s0094g01170.t01 Wine grape cytosol 0.0 0.0
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sf
GO:GO:0003674GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506GO:GO:0005575
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0016020GO:GO:0016021GO:GO:0016491
GO:GO:0016705GO:GO:0016709GO:GO:0019748GO:GO:0020037GO:GO:0044550GO:GO:0046872
GO:GO:0055114InterPro:IPR036396UniProt:K4CNT7PFAM:PF00067PRINTS:PR00385PRINTS:PR00463
ScanProsite:PS00086PANTHER:PTHR24298PANTHER:PTHR24298:SF114SUPFAM:SSF48264EnsemblPlantsGene:Solyc08g079300.2EnsemblPlants:Solyc08g079300.2.1
TMHMM:TMhelixUniParc:UPI000276B0FDSEG:seg:::
Description
No Description!
Coordinates
chr8:+:62893507..62895451
Molecular Weight (calculated)
60507.7 Da
IEP (calculated)
8.705
GRAVY (calculated)
-0.162
Length
532 amino acids
Sequence
(BLAST)
001: MSLKFFKRLF DFYSCSWQES NIEQKGVFFS YILGIVALLW FLWLFINKSK KGQPQLPPGP KALPLIGNLH SLDPQLHTYF ASLSQTYGPI YTLWLGKKVG
101: IIITSPALAR EVLKDQDTIF ANRDVPAAGR EATYGGTDIV WTPYGPKWRM LRKVCVREML SGSTLDSVYA LRRRELRQTI NYFYSQEGLP VNIGEQMFLT
201: VLNVITSMLW GGTVKGEERS TLGAEFRHVV TKMTELLGTP NLSDFYPGLA RFDLQGVTKK MKVLAKRFDK IFESMIDKRQ DIDRNGGMET GVGQENKDFL
301: QVLLKLKDDE AAKMPLTMPE LKALLMDMVV GGTDTTSNTV EFAMAEIVNK PYVLRKLQEE VDTVVGKDNI VEESHIQHLP YFYAVMKEVL RLHPALPLLV
401: PHCPSETSTV GGYTVPKGSR VFINVWAIQR DPSIWENPTE FRPERFLDNK WDYSGNDLNY FPFGSGRRIC AGIGMAERMF MYSLASLVHS FDWKLPEGET
501: LDLTEKFGIV LKKKMPLVAI PTPRLSNPTL YE
Best Arabidopsis Sequence Match ( AT4G12320.1 )
(BLAST)
001: MSPISNLFAG NTINLTPYAI LILIAIFSIL WYLFKRSPQP HLPPGPRGLP IVGNLPFLDP DLHTYFTKLA ESYGPIFKLN LGSKLTVVVN TPSLAREILK
101: DQDINFSNHD VPLTARAVTY GGLDLVWLPY GAEWRMLRKV CVLKLLSHRT LNSFYELRRK EIRERTRYLY QKGQEESPVN VGEQVFLTMM NLTMNMLWGG
201: SVKAEEMESV GTEFKEVISE ITRLLGEPNV SDFFPRLARF DLQGLVKKMH VCARELDAIL DRAIEQMQLL RTRDGDDGEC KDFLQHLMKL KDQEADSEVP
301: ITVNHVKAVL VDLVVGGTDT STNTIEFAMA ELIRKPELMK RAQQELDEVV GKDNIIEESH ITRLPFISAI MKETLRLYPT IPLLVPHRPS ETALVGGYTI
401: PKNTKIFINV WSIQRDPNVW EYPTEFRPER FLDKKSCDFT GTDYSYLPFG SGRRICAGIA LAERMILYTL ATLLHSFDWK IPEGHILDLK EKFGIVLKLK
501: SPLVALPVPR LSNSNLYL
Arabidopsis Description
CYP706A6At4g12320 [Source:UniProtKB/TrEMBL;Acc:Q66GJ1]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.