Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 3
- golgi 3
- plasma membrane 3
- endoplasmic reticulum 5
- vacuole 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G12310.1 | Thale cress | endoplasmic reticulum, plasma membrane | 86.49 | 86.15 |
| AT4G12300.1 | Thale cress | endoplasmic reticulum | 84.17 | 84.5 |
| Bra018471.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 82.24 | 82.56 |
| CDX97347 | Canola | endoplasmic reticulum, plasma membrane | 81.85 | 82.17 |
| CDY04419 | Canola | endoplasmic reticulum, plasma membrane | 81.47 | 81.78 |
| CDX94508 | Canola | endoplasmic reticulum, plasma membrane | 80.12 | 80.43 |
| Bra029445.1-P | Field mustard | endoplasmic reticulum | 79.92 | 80.39 |
| CDX90826 | Canola | endoplasmic reticulum | 78.76 | 79.07 |
| Bra000768.1-P | Field mustard | endoplasmic reticulum, extracellular | 76.45 | 78.57 |
| CDX86715 | Canola | endoplasmic reticulum | 78.19 | 78.49 |
| Bra000769.1-P | Field mustard | endoplasmic reticulum | 77.61 | 77.91 |
| CDX90825 | Canola | endoplasmic reticulum | 77.61 | 77.91 |
| CDY21265 | Canola | cytosol | 47.1 | 76.49 |
| CDY21266 | Canola | endoplasmic reticulum | 76.45 | 74.58 |
| KRH57291 | Soybean | cytosol | 22.97 | 62.3 |
| VIT_00s0555g00010.t01 | Wine grape | cytosol | 15.64 | 61.83 |
| VIT_05s0094g01170.t01 | Wine grape | cytosol | 13.32 | 61.06 |
| VIT_05s0094g01180.t01 | Wine grape | cytosol | 41.31 | 57.84 |
| KRH04015 | Soybean | endoplasmic reticulum, extracellular | 56.76 | 57.53 |
| AT4G12330.1 | Thale cress | endoplasmic reticulum | 55.98 | 55.98 |
| KRH04014 | Soybean | endoplasmic reticulum | 55.02 | 55.13 |
| AT5G44620.1 | Thale cress | golgi | 54.63 | 54.53 |
| VIT_00s0555g00020.t01 | Wine grape | golgi | 55.6 | 54.34 |
| Solyc08g083410.1.1 | Tomato | endoplasmic reticulum, golgi | 52.51 | 52.21 |
| Solyc08g079330.1.1 | Tomato | endoplasmic reticulum, golgi, plastid | 52.32 | 52.02 |
| Solyc08g083510.1.1 | Tomato | endoplasmic reticulum, plasma membrane | 51.93 | 51.63 |
| Solyc08g083500.1.1 | Tomato | endoplasmic reticulum, plasma membrane | 51.54 | 51.25 |
| Solyc08g079370.1.1 | Tomato | endoplasmic reticulum, golgi | 50.97 | 50.67 |
| Solyc08g083520.1.1 | Tomato | endoplasmic reticulum, plasma membrane | 50.97 | 50.48 |
| Solyc08g079350.1.1 | Tomato | endoplasmic reticulum, plasma membrane | 50.77 | 50.29 |
| AT4G22710.1 | Thale cress | endoplasmic reticulum | 50.77 | 50.0 |
| Zm00001d032035_P001 | Maize | endoplasmic reticulum | 48.26 | 48.26 |
| EES14120 | Sorghum | endoplasmic reticulum | 48.84 | 47.83 |
| AT4G22690.1 | Thale cress | plastid | 50.39 | 46.86 |
| Os08t0547900-01 | Rice | plasma membrane | 34.17 | 46.7 |
| Os01t0700500-01 | Rice | cytosol | 37.64 | 45.77 |
| Zm00001d039698_P002 | Maize | endoplasmic reticulum | 44.02 | 44.53 |
| HORVU3Hr1G013490.1 | Barley | cytosol, endoplasmic reticulum, plastid | 46.53 | 44.46 |
| HORVU7Hr1G057280.2 | Barley | mitochondrion | 46.91 | 40.1 |
| TraesCS7B01G169500.1 | Wheat | plastid | 46.53 | 39.9 |
| TraesCS7A01G271200.1 | Wheat | mitochondrion, plastid | 46.33 | 39.74 |
| TraesCS7D01G271600.2 | Wheat | plastid | 46.14 | 39.64 |
| Solyc08g079310.2.1 | Tomato | endoplasmic reticulum | 25.87 | 26.02 |
| Solyc08g079300.2.1 | Tomato | plastid | 26.64 | 25.94 |
| Solyc08g079280.2.1 | Tomato | endoplasmic reticulum, golgi, plastid | 25.87 | 25.57 |
| PGSC0003DMT400044120 | Potato | cytosol | 2.51 | 4.87 |
Protein Annotations
| Gene3D:1.10.630.10 | MapMan:50.1.13 | EntrezGene:826841 | ProteinID:AEE83114.1 | ArrayExpress:AT4G12320 | EnsemblPlantsGene:AT4G12320 |
| RefSeq:AT4G12320 | TAIR:AT4G12320 | RefSeq:AT4G12320-TAIR-G | EnsemblPlants:AT4G12320.1 | TAIR:AT4G12320.1 | EMBL:BT015411 |
| Symbol:CYP706A6 | ncoils:Coil | InterPro:Cyt_P450 | InterPro:Cyt_P450_CS | InterPro:Cyt_P450_E_grp-I | InterPro:Cyt_P450_sf |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004497 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0016705 | GO:GO:0016709 |
| GO:GO:0019748 | GO:GO:0020037 | GO:GO:0044550 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPR036396 |
| RefSeq:NP_192969.4 | PFAM:PF00067 | PO:PO:0000293 | PRINTS:PR00385 | PRINTS:PR00463 | ScanProsite:PS00086 |
| PANTHER:PTHR24298 | PANTHER:PTHR24298:SF114 | UniProt:Q66GJ1 | SUPFAM:SSF48264 | TMHMM:TMhelix | UniParc:UPI00004267D5 |
| SEG:seg | : | : | : | : | : |
Description
CYP706A6At4g12320 [Source:UniProtKB/TrEMBL;Acc:Q66GJ1]
Coordinates
chr4:-:7313779..7316871
Molecular Weight (calculated)
59032.1 Da
IEP (calculated)
7.341
GRAVY (calculated)
-0.094
Length
518 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPISNLFAG NTINLTPYAI LILIAIFSIL WYLFKRSPQP HLPPGPRGLP IVGNLPFLDP DLHTYFTKLA ESYGPIFKLN LGSKLTVVVN TPSLAREILK
101: DQDINFSNHD VPLTARAVTY GGLDLVWLPY GAEWRMLRKV CVLKLLSHRT LNSFYELRRK EIRERTRYLY QKGQEESPVN VGEQVFLTMM NLTMNMLWGG
201: SVKAEEMESV GTEFKEVISE ITRLLGEPNV SDFFPRLARF DLQGLVKKMH VCARELDAIL DRAIEQMQLL RTRDGDDGEC KDFLQHLMKL KDQEADSEVP
301: ITVNHVKAVL VDLVVGGTDT STNTIEFAMA ELIRKPELMK RAQQELDEVV GKDNIIEESH ITRLPFISAI MKETLRLYPT IPLLVPHRPS ETALVGGYTI
401: PKNTKIFINV WSIQRDPNVW EYPTEFRPER FLDKKSCDFT GTDYSYLPFG SGRRICAGIA LAERMILYTL ATLLHSFDWK IPEGHILDLK EKFGIVLKLK
501: SPLVALPVPR LSNSNLYL
101: DQDINFSNHD VPLTARAVTY GGLDLVWLPY GAEWRMLRKV CVLKLLSHRT LNSFYELRRK EIRERTRYLY QKGQEESPVN VGEQVFLTMM NLTMNMLWGG
201: SVKAEEMESV GTEFKEVISE ITRLLGEPNV SDFFPRLARF DLQGLVKKMH VCARELDAIL DRAIEQMQLL RTRDGDDGEC KDFLQHLMKL KDQEADSEVP
301: ITVNHVKAVL VDLVVGGTDT STNTIEFAMA ELIRKPELMK RAQQELDEVV GKDNIIEESH ITRLPFISAI MKETLRLYPT IPLLVPHRPS ETALVGGYTI
401: PKNTKIFINV WSIQRDPNVW EYPTEFRPER FLDKKSCDFT GTDYSYLPFG SGRRICAGIA LAERMILYTL ATLLHSFDWK IPEGHILDLK EKFGIVLKLK
501: SPLVALPVPR LSNSNLYL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.