Factsheet for PGSC0003DMT400010109

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 1
extracellular 4
endoplasmic reticulum 7
vacuole 4
plasma membrane 5
golgi 4
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
PTS1:	peroxisome
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g079420.2.1	Tomato	endoplasmic reticulum	87.04	87.89
PGSC0003DMT400044122	Potato	extracellular	85.11	85.44
PGSC0003DMT400044123	Potato	cytosol, mitochondrion	31.14	82.99
PGSC0003DMT400049084	Potato	cytosol	9.28	66.67
VIT_05s0094g01190.t01	Wine grape	cytosol	30.75	62.35
PGSC0003DMT400072105	Potato	mitochondrion	22.24	56.1
VIT_00s1682g00020.t01	Wine grape	cytosol	39.65	54.38
PGSC0003DMT400002268	Potato	endoplasmic reticulum, extracellular	15.28	53.74
KRH50374	Soybean	endoplasmic reticulum, plasma membrane	49.71	48.4
VIT_05s0094g01200.t01	Wine grape	endoplasmic reticulum	15.67	47.65
VIT_05s0094g01220.t01	Wine grape	cytosol	21.08	47.39
Os01t0700500-01	Rice	cytosol	37.52	45.54
PGSC0003DMT400072104	Potato	endoplasmic reticulum, plasma membrane	45.07	44.47
PGSC0003DMT400072098	Potato	endoplasmic reticulum, plasma membrane	45.07	44.47
Os08t0547900-01	Rice	plasma membrane	32.11	43.8
PGSC0003DMT400072097	Potato	extracellular, plasma membrane	43.91	43.57
PGSC0003DMT400012187	Potato	endoplasmic reticulum, golgi	43.91	43.57
Zm00001d039698_P002	Maize	endoplasmic reticulum	43.13	43.55
EES14120	Sorghum	endoplasmic reticulum	44.29	43.29
Zm00001d032035_P001	Maize	endoplasmic reticulum	43.33	43.24
PGSC0003DMT400012182	Potato	endoplasmic reticulum, extracellular	43.52	42.78
PGSC0003DMT400012190	Potato	endoplasmic reticulum, golgi, plastid	42.94	42.61
HORVU3Hr1G013490.1	Barley	cytosol, endoplasmic reticulum, plastid	43.71	41.7
PGSC0003DMT400012185	Potato	cytosol	42.94	37.76
HORVU7Hr1G057280.2	Barley	mitochondrion	43.52	37.13
TraesCS7B01G169500.1	Wheat	plastid	43.13	36.92
TraesCS7D01G271600.2	Wheat	plastid	42.94	36.82
TraesCS7A01G271200.1	Wheat	mitochondrion, plastid	42.75	36.59
PGSC0003DMT400012193	Potato	endoplasmic reticulum	19.15	20.29
PGSC0003DMT400012194	Potato	plastid	47.78	18.03
PGSC0003DMT400044120	Potato	cytosol	1.55	3.0

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114
InterPro:IPR036396	UniProt:M0ZXH9	PFAM:PF00067	EnsemblPlantsGene:PGSC0003DMG400003961	PGSC:PGSC0003DMG400003961	EnsemblPlants:PGSC0003DMT400010109
PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF312	SUPFAM:SSF48264
UniParc:UPI0002955EAB	SEG:seg	:	:	:	:

Description

Cytochrome P450 [Source:PGSC_GENE;Acc:PGSC0003DMG400003961]

Coordinates

chr8:+:53117931..53120914

Molecular Weight (calculated)

58850.0 Da

IEP (calculated)

6.895

GRAVY (calculated)

-0.119

Length

517 amino acids

Sequence
(BLAST)

001: MASEPLNDLQ IVALTLSIVF LTILWYKLTS HKEESRLPPG PRGLPIVGFL PFLHTNLHHQ LTELSQQYGP IYKFWLGGKL CVVLNSPSLA KEVVRDQDSV
101: FANRDPPIAG LVATYGGLDI GFSPYGSYWR DMRKLFVREM LSNRNLEACY SLRRHEVRKT IRNVHTKIGS LTDIGELAFV TEINVIMSMI FGSNFVEEME
201: KHKKDGTEFR ELVIKYLQLL GKPNISDFFP MLARFDLQGI QKDAEALLKS VESILDPAIN EHLKMLSDRR EGEIQQNEKK DFIQILLELM EQKDIGISLD
301: LVKIKAILVD IIIGGTDSTI TTVEWVMTEL LNNPEKMSKV QQELKHVVGM NNVVEESHLP ELHYLDAILK ETLRLHPALP LLLPKRPSQS AIVGGYKIPE
401: GTKVFLNVYA IHRDPQVWES PLEFQPERFL SRSTNLDYAG NNMKYLPFGS GRRICAGLPL AEKMVMFMLA SLLHSFNWKL PEGEKVDLSE GFGLVIKKSE
501: RPFAIPTPRL PNFDLYQ

Best Arabidopsis Sequence Match ( AT4G12300.1 )
(BLAST)

001: MSPISNLFPD NTINLTPYAI VILTTVFSIL WYIFKRSPQP SLPPGPRGLP IVGNLPFLDP DLHTYFANLA QSHGPIFKLN LGSKLTIVVN SPSLAREILK
101: DQDINFSNRD VPLTGRAATY GGIDIVWTPY GAEWRQLRKI CVLKLLSRKT LDSFYELRRK EVRERTRYLY EQGRKQSPVK VGDQLFLTMM NLTMNMLWGG
201: SVKAEEMESV GTEFKGVISE ITRLLSEPNV SDFFPWLARF DLQGLVKRMG VCARELDAVL DRAIEQMKPL RGRDDDEVKD FLQYLMKLKD QEGDSEVPIT
301: INHVKALLTD MVVGGTDTST NTIEFAMAEL MSNPELIKRA QEELDEVVGK DNIVEESHIT RLPYILAIMK ETLRLHPTLP LLVPHRPAEN TVVGGYTIPK
401: DTKIFVNVWS IQRDPNVWEN PTEFRPERFL DNNSCDFTGA NYSYFPFGSG RRICAGVALA ERMVLYTLAT LLHSFDWKIP EGHVLDLKEK FGIVLKLKIP
501: LVALPIPRFS DSNLYL

Arabidopsis Description

CYP706A4Cytochrome P450, family 706, subfamily A, polypeptide 4 [Source:UniProtKB/TrEMBL;Acc:Q9STI1]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.