Factsheet for PGSC0003DMT400012182

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g079350.1.1	Tomato	endoplasmic reticulum, plasma membrane	92.21	92.73
PGSC0003DMT400012190	Potato	endoplasmic reticulum, golgi, plastid	87.64	88.48
PGSC0003DMT400002268	Potato	endoplasmic reticulum, extracellular	24.33	87.07
PGSC0003DMT400012187	Potato	endoplasmic reticulum, golgi	84.79	85.6
PGSC0003DMT400072104	Potato	endoplasmic reticulum, plasma membrane	83.84	84.16
PGSC0003DMT400072097	Potato	extracellular, plasma membrane	83.08	83.88
PGSC0003DMT400072105	Potato	mitochondrion	32.51	83.41
PGSC0003DMT400072098	Potato	endoplasmic reticulum, plasma membrane	82.7	83.02
PGSC0003DMT400012185	Potato	cytosol	78.14	69.9
Zm00001d032035_P001	Maize	endoplasmic reticulum	50.76	51.54
Os08t0547900-01	Rice	plasma membrane	36.5	50.66
EES14120	Sorghum	endoplasmic reticulum	50.57	50.28
Os01t0700500-01	Rice	cytosol	40.68	50.23
Zm00001d039698_P002	Maize	endoplasmic reticulum	46.39	47.66
HORVU3Hr1G013490.1	Barley	cytosol, endoplasmic reticulum, plastid	48.29	46.86
PGSC0003DMT400044122	Potato	extracellular	43.92	44.85
HORVU7Hr1G057280.2	Barley	mitochondrion	50.95	44.22
TraesCS7A01G271200.1	Wheat	mitochondrion, plastid	50.57	44.04
TraesCS7B01G169500.1	Wheat	plastid	50.38	43.87
TraesCS7D01G271600.2	Wheat	plastid	50.19	43.78
PGSC0003DMT400010109	Potato	endoplasmic reticulum	42.78	43.52
PGSC0003DMT400012193	Potato	endoplasmic reticulum	38.21	41.19
PGSC0003DMT400049084	Potato	cytosol	5.51	40.28
PGSC0003DMT400044123	Potato	cytosol, mitochondrion	13.31	36.08
PGSC0003DMT400012194	Potato	plastid	81.18	31.17
PGSC0003DMT400044120	Potato	cytosol	4.18	8.24

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0016705
GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396	UniProt:M1A0U9	PFAM:PF00067
EnsemblPlantsGene:PGSC0003DMG400004775	PGSC:PGSC0003DMG400004775	EnsemblPlants:PGSC0003DMT400012182	PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086
PANTHER:PTHR24298	PANTHER:PTHR24298:SF114	SUPFAM:SSF48264	TMHMM:TMhelix	UniParc:UPI000294A065	SEG:seg

Description

Cytochrome P450 [Source:PGSC_GENE;Acc:PGSC0003DMG400004775]

Coordinates

chr8:+:52905902..52907881

Molecular Weight (calculated)

59816.2 Da

IEP (calculated)

9.136

GRAVY (calculated)

-0.089

Length

526 amino acids

Sequence
(BLAST)

001: MLQMSLKFFK PLFDYFSWLL QQLNVEKKGV CFSCFLGFLA LLWFFISNSN KGLPPGPKPL PLIGNLYSLD PTYFASLSQT YGPICRLWLG KKVGIIITSP
101: ALAREVLKDK DTIFANRDVP AAARELSYGG NNILWSPYGP KWRMLRKVCV RDMLSSSTLD SVYALRRKEL RQSINYFYSQ KGLPVNVGEQ MFLTLLNVIT
201: SMLWGGTVKG EERASLGAEF RHIVTEMAAL VSIPNYSDFY PGLAWFDLQG VTKKMKVLAK RFDKIFESMI DQRQKLHKNA EMGNGVGQES KDFLQVLLKL
301: KDEADSKMPL TMTEIKALLM EMVLGGTATT ANTVEFAMAE IMHKPDVLRK LQQEVDTVVG KDNIVEESHI QQLPYLYAVM KEVLRMHPAT PLLVPHCPSE
401: TCTVGGYTVP KGSRVFINVW AIQRDASIWK NPTEFRPERF LDNKWDYSGN DFNYFPFGSG RRICVGIAMA ERMFMYSLAS LIHSFDWKLP EGETSDLTEM
501: FDITLRKKIP LVALPTPRLS NPTLYE

Best Arabidopsis Sequence Match ( AT4G12300.1 )
(BLAST)

001: MSPISNLFPD NTINLTPYAI VILTTVFSIL WYIFKRSPQP SLPPGPRGLP IVGNLPFLDP DLHTYFANLA QSHGPIFKLN LGSKLTIVVN SPSLAREILK
101: DQDINFSNRD VPLTGRAATY GGIDIVWTPY GAEWRQLRKI CVLKLLSRKT LDSFYELRRK EVRERTRYLY EQGRKQSPVK VGDQLFLTMM NLTMNMLWGG
201: SVKAEEMESV GTEFKGVISE ITRLLSEPNV SDFFPWLARF DLQGLVKRMG VCARELDAVL DRAIEQMKPL RGRDDDEVKD FLQYLMKLKD QEGDSEVPIT
301: INHVKALLTD MVVGGTDTST NTIEFAMAEL MSNPELIKRA QEELDEVVGK DNIVEESHIT RLPYILAIMK ETLRLHPTLP LLVPHRPAEN TVVGGYTIPK
401: DTKIFVNVWS IQRDPNVWEN PTEFRPERFL DNNSCDFTGA NYSYFPFGSG RRICAGVALA ERMVLYTLAT LLHSFDWKIP EGHVLDLKEK FGIVLKLKIP
501: LVALPIPRFS DSNLYL

Arabidopsis Description

CYP706A4Cytochrome P450, family 706, subfamily A, polypeptide 4 [Source:UniProtKB/TrEMBL;Acc:Q9STI1]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.