Factsheet for PGSC0003DMT400072104

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

cytosol 1
endoplasmic reticulum 4
extracellular 2
vacuole 2
plasma membrane 3
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g079370.1.1	Tomato	endoplasmic reticulum, golgi	91.03	91.55
PGSC0003DMT400002268	Potato	endoplasmic reticulum, extracellular	24.43	87.07
PGSC0003DMT400012187	Potato	endoplasmic reticulum, golgi	86.45	86.95
PGSC0003DMT400012190	Potato	endoplasmic reticulum, golgi, plastid	86.07	86.56
PGSC0003DMT400072098	Potato	endoplasmic reticulum, plasma membrane	84.92	84.92
PGSC0003DMT400072097	Potato	extracellular, plasma membrane	84.16	84.64
PGSC0003DMT400012182	Potato	endoplasmic reticulum, extracellular	84.16	83.84
PGSC0003DMT400072105	Potato	mitochondrion	31.87	81.46
PGSC0003DMT400012185	Potato	cytosol	82.63	73.64
Os08t0547900-01	Rice	plasma membrane	37.21	51.45
Zm00001d032035_P001	Maize	endoplasmic reticulum	50.57	51.16
Os01t0700500-01	Rice	cytosol	40.65	50.0
EES14120	Sorghum	endoplasmic reticulum	50.38	49.91
Zm00001d039698_P002	Maize	endoplasmic reticulum	47.9	49.02
HORVU3Hr1G013490.1	Barley	cytosol, endoplasmic reticulum, plastid	49.62	47.97
PGSC0003DMT400044122	Potato	extracellular	44.85	45.63
PGSC0003DMT400010109	Potato	endoplasmic reticulum	44.47	45.07
HORVU7Hr1G057280.2	Barley	mitochondrion	51.91	44.88
TraesCS7D01G271600.2	Wheat	plastid	50.95	44.28
TraesCS7A01G271200.1	Wheat	mitochondrion, plastid	50.95	44.21
TraesCS7B01G169500.1	Wheat	plastid	50.76	44.04
PGSC0003DMT400012193	Potato	endoplasmic reticulum	36.64	39.34
PGSC0003DMT400049084	Potato	cytosol	4.96	36.11
PGSC0003DMT400044123	Potato	cytosol, mitochondrion	12.98	35.05
PGSC0003DMT400012194	Potato	plastid	82.25	31.46
PGSC0003DMT400044120	Potato	cytosol	4.58	8.99

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:102595462	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0016705	GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396	UniProt:M1CPQ0
PFAM:PF00067	EnsemblPlantsGene:PGSC0003DMG400028053	PGSC:PGSC0003DMG400028053	EnsemblPlants:PGSC0003DMT400072104	PRINTS:PR00385	PRINTS:PR00463
ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF114	SUPFAM:SSF48264	TMHMM:TMhelix	UniParc:UPI0002949091
RefSeq:XP_006355529.1	SEG:seg	:	:	:	:

Description

Cytochrome P450 [Source:PGSC_GENE;Acc:PGSC0003DMG400028053]

Coordinates

chr8:+:52927314..52929582

Molecular Weight (calculated)

59973.5 Da

IEP (calculated)

9.546

GRAVY (calculated)

-0.037

Length

524 amino acids

Sequence
(BLAST)

001: MSLKFFKPLF DSFPWLLQEL NVEQKGVFIS YFLGFLALLW FLLFFIRNSN KGLPPGPKAL PLIGNLLSLD PELHTYFASL SQTYGPICRL WLGKKLGIII
101: SSPALAREVL KHKDTIFANR DVSAAGREFS YGINDLLWSP YGPKWRMLRK LCVRDMLSCS SLDSVYALRR RELRQSINYF YSQKGLPVNI GEQMFLTVFN
201: VITSMLWGGT VKGGERASLG AEFRHVVTEI VELVSIPNLS DFYPGLTWFD FQGVIKKMKV VLKRFDKIFE SIIDQRQKLD RNGVVQESKD FLQVLLKLKD
301: EADPKMPLTM TEIKALLMDL VVGGTDTTSN AVEFAMTEIL NKPDVLRKLQ QEVDTVVGKD NIVEESHIQQ LPYFYAVMKE VLRLHPALPL LAPHCPSETV
401: TVGGYTVPKG SHIFVNVWAI HRDPSIWKNP TEFRPERFLH NKWDYSGNDF NYFPFGSGRR MCAGIAMAER MFMYSLASLI HSFDWKLPEG KTLDLKEKFG
501: ITLKKKMPLV AIPTPRLFNP TLYE

Best Arabidopsis Sequence Match ( AT4G12320.1 )
(BLAST)

001: MSPISNLFAG NTINLTPYAI LILIAIFSIL WYLFKRSPQP HLPPGPRGLP IVGNLPFLDP DLHTYFTKLA ESYGPIFKLN LGSKLTVVVN TPSLAREILK
101: DQDINFSNHD VPLTARAVTY GGLDLVWLPY GAEWRMLRKV CVLKLLSHRT LNSFYELRRK EIRERTRYLY QKGQEESPVN VGEQVFLTMM NLTMNMLWGG
201: SVKAEEMESV GTEFKEVISE ITRLLGEPNV SDFFPRLARF DLQGLVKKMH VCARELDAIL DRAIEQMQLL RTRDGDDGEC KDFLQHLMKL KDQEADSEVP
301: ITVNHVKAVL VDLVVGGTDT STNTIEFAMA ELIRKPELMK RAQQELDEVV GKDNIIEESH ITRLPFISAI MKETLRLYPT IPLLVPHRPS ETALVGGYTI
401: PKNTKIFINV WSIQRDPNVW EYPTEFRPER FLDKKSCDFT GTDYSYLPFG SGRRICAGIA LAERMILYTL ATLLHSFDWK IPEGHILDLK EKFGIVLKLK
501: SPLVALPVPR LSNSNLYL

Arabidopsis Description

CYP706A6At4g12320 [Source:UniProtKB/TrEMBL;Acc:Q66GJ1]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.