Factsheet for PGSC0003DMT400044123

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 2
cytosol 2
endoplasmic reticulum 1
nucleus 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400049084	Potato	cytosol	23.2	62.5
VIT_05s0094g01220.t01	Wine grape	cytosol	38.14	32.17
Solyc08g079420.2.1	Tomato	endoplasmic reticulum	82.47	31.25
PGSC0003DMT400010109	Potato	endoplasmic reticulum	82.99	31.14
PGSC0003DMT400044122	Potato	extracellular	74.74	28.16
VIT_00s1682g00020.t01	Wine grape	cytosol	37.63	19.36
Os08t0547900-01	Rice	plasma membrane	27.84	14.25
KRH50374	Soybean	endoplasmic reticulum, plasma membrane	38.66	14.12
Os01t0700500-01	Rice	cytosol	30.93	14.08
PGSC0003DMT400072098	Potato	endoplasmic reticulum, plasma membrane	37.11	13.74
PGSC0003DMT400012182	Potato	endoplasmic reticulum, extracellular	36.08	13.31
PGSC0003DMT400012190	Potato	endoplasmic reticulum, golgi, plastid	35.57	13.24
PGSC0003DMT400072104	Potato	endoplasmic reticulum, plasma membrane	35.05	12.98
PGSC0003DMT400012187	Potato	endoplasmic reticulum, golgi	34.54	12.86
Zm00001d039698_P002	Maize	endoplasmic reticulum	33.51	12.7
PGSC0003DMT400072097	Potato	extracellular, plasma membrane	34.02	12.67
Zm00001d032035_P001	Maize	endoplasmic reticulum	33.51	12.55
EES14120	Sorghum	endoplasmic reticulum	32.99	12.1
HORVU3Hr1G013490.1	Barley	cytosol, endoplasmic reticulum, plastid	32.47	11.62
PGSC0003DMT400012185	Potato	cytosol	34.54	11.39
TraesCS7A01G271200.1	Wheat	mitochondrion, plastid	34.54	11.09
TraesCS7B01G169500.1	Wheat	plastid	34.54	11.09
TraesCS7D01G271600.2	Wheat	plastid	34.02	10.95
HORVU7Hr1G057280.2	Barley	mitochondrion	34.02	10.89
PGSC0003DMT400012193	Potato	endoplasmic reticulum	27.32	10.86
VIT_05s0094g01190.t01	Wine grape	cytosol	9.79	7.45
VIT_05s0094g01200.t01	Wine grape	endoplasmic reticulum	5.67	6.47
PGSC0003DMT400012194	Potato	plastid	37.63	5.33
PGSC0003DMT400072105	Potato	mitochondrion	3.61	3.41
PGSC0003DMT400044120	Potato	cytosol	3.09	2.25
PGSC0003DMT400002268	Potato	endoplasmic reticulum, extracellular	1.03	1.36

Protein Annotations

EnsemblPlants:PGSC0003DMT400044123	EnsemblPlantsGene:PGSC0003DMG400017125	Gene3D:1.10.630.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005506	GO:GO:0008150	GO:GO:0008152	GO:GO:0016705	GO:GO:0020037	GO:GO:0055114
InterPro:Cyt_P450	InterPro:Cyt_P450_sf	InterPro:IPR036396	PANTHER:PTHR24298	PANTHER:PTHR24298:SF312	PFAM:PF00067
PGSC:PGSC0003DMG400017125	SUPFAM:SSF48264	UniParc:UPI000295AFCE	UniProt:M1BFM8	MapMan:50.1.13	:

Description

Cytochrome P450 [Source:PGSC_GENE;Acc:PGSC0003DMG400017125]

Coordinates

chr00:+:36405103..36407327

Molecular Weight (calculated)

22568.0 Da

IEP (calculated)

9.429

GRAVY (calculated)

-0.137

Length

194 amino acids

Sequence
(BLAST)

001: MRKLFVREML SNRNLEACYS LRRHEVRKTI RNVHTKIGSL TDIGELAFVT EMNVIMSMIF GSNFVEKMEK HKKDRTEFRE LVIKYLQILG KPNISDFFPK
101: LARFDLQGIQ KDTEALLKSV ESILDPAINE HLKMLSDRRE GEIQGNEKKN FIQILLELME QKDIGISLDL VKIKAILVVS YIVPLSFLYR CSSC

Best Arabidopsis Sequence Match ( AT4G12320.1 )
(BLAST)

001: MSPISNLFAG NTINLTPYAI LILIAIFSIL WYLFKRSPQP HLPPGPRGLP IVGNLPFLDP DLHTYFTKLA ESYGPIFKLN LGSKLTVVVN TPSLAREILK
101: DQDINFSNHD VPLTARAVTY GGLDLVWLPY GAEWRMLRKV CVLKLLSHRT LNSFYELRRK EIRERTRYLY QKGQEESPVN VGEQVFLTMM NLTMNMLWGG
201: SVKAEEMESV GTEFKEVISE ITRLLGEPNV SDFFPRLARF DLQGLVKKMH VCARELDAIL DRAIEQMQLL RTRDGDDGEC KDFLQHLMKL KDQEADSEVP
301: ITVNHVKAVL VDLVVGGTDT STNTIEFAMA ELIRKPELMK RAQQELDEVV GKDNIIEESH ITRLPFISAI MKETLRLYPT IPLLVPHRPS ETALVGGYTI
401: PKNTKIFINV WSIQRDPNVW EYPTEFRPER FLDKKSCDFT GTDYSYLPFG SGRRICAGIA LAERMILYTL ATLLHSFDWK IPEGHILDLK EKFGIVLKLK
501: SPLVALPVPR LSNSNLYL

Arabidopsis Description

CYP706A6At4g12320 [Source:UniProtKB/TrEMBL;Acc:Q66GJ1]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.