Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 2
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| endoplasmic reticulum:
27224218
mitochondrion: 28499913 |
msms PMID:
28499913
doi
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH17059 | Soybean | endoplasmic reticulum, nucleus | 98.01 | 98.18 |
| KRH28591 | Soybean | endoplasmic reticulum | 94.37 | 94.59 |
| KRH76885 | Soybean | endoplasmic reticulum | 94.2 | 94.42 |
| KRG97711 | Soybean | endoplasmic reticulum, nucleus | 91.38 | 91.71 |
| KRH31163 | Soybean | endoplasmic reticulum | 91.32 | 91.65 |
| KRH14933 | Soybean | nucleus | 90.68 | 91.0 |
| KRH73205 | Soybean | nucleus | 90.8 | 90.74 |
| KXG22761 | Sorghum | plastid | 89.98 | 89.77 |
| EES07849 | Sorghum | plastid | 89.86 | 89.7 |
| TraesCS5D01G158800.1 | Wheat | plastid | 88.92 | 88.82 |
| TraesCS5A01G153500.1 | Wheat | golgi, unclear | 88.86 | 88.76 |
| TraesCS5B01G152300.1 | Wheat | unclear | 88.8 | 88.7 |
| TraesCS4A01G182300.1 | Wheat | extracellular, golgi | 89.1 | 88.63 |
| TraesCS4D01G130900.1 | Wheat | golgi, unclear | 88.98 | 88.51 |
| Os11t0104900-00 | Rice | plasma membrane | 35.93 | 87.7 |
| TraesCS4B01G136100.2 | Wheat | golgi, unclear | 88.92 | 87.59 |
| HORVU4Hr1G024710.4 | Barley | plastid | 88.92 | 85.18 |
| Os12t0104766-00 | Rice | plasma membrane | 28.72 | 84.78 |
| Os11t0104866-00 | Rice | plasma membrane | 28.6 | 84.43 |
| HORVU5Hr1G048010.1 | Barley | plastid | 88.63 | 83.86 |
| KRH12961 | Soybean | cytosol | 4.34 | 77.08 |
| KRH25762 | Soybean | cytosol | 4.16 | 73.96 |
| Os12t0104800-01 | Rice | cytosol | 5.22 | 72.95 |
Protein Annotations
Description
hypothetical protein
Coordinates
chr2:-:41575448..41588933
Molecular Weight (calculated)
193166.0 Da
IEP (calculated)
5.085
GRAVY (calculated)
-0.153
Length
1706 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAANAPITMK ETLTLGSVGI NQQFITFTHV TMESDKYICV RETGPQNSVV IIDMSMPMQP LRRPITADSA LMNPNSRILA LKAQVPGTTQ DHLQVFNIET
0101: KAKMKSHQMK EQVVFWKWIT PNTLGIVTQT SVYHWSVEGD GEPMKMFDRT ANLANNQIIN YRCDPNEKWL VLIGIAPGSA ERPQLVKGNM QLFSVDQQRS
0201: QALEAHAASF ATFRVAGNDK ESTLICFASK SLNAGQVTSK MHVIELGAQP GKPSFTKKQA DLFFPPDFAD DFPVSMQISN KYGLIYVITK LGLLFVYDLE
0301: TSTAVYRNRI SSDPIFLTTE ALSVGGFYAI NRRGQVLLAT INEAAIVPFV SGQLNNLELA VNLAKRGNLP GAEELVVKRF QELFSQTKYK EAAELAAESP
0401: RGILRTPDTV AKFQSVPVQA GQTPPLLQYF GTLLTRGKLN SYESLELSRL VVNQNKKNLL ENWLAEDKLE CSEELGDLVK TVDNDLALKI FIKARATPKV
0501: VAAFAERREF DKILIYSKQV GYTPDYMFLL QTILRADAQG AVNFALMMSQ MEGGCPVDYN TITDLFLQRN LIREATAFLL DVLKSNLPEH GYLQTKVLEI
0601: NLVTFPNVAD AILANGMFSH YDRPRIAQLC EKAGLFIRAL QHYSELPDIK RVIVNTHAIE PQALVEFFGT LSKEWALECM KDLLLVNLRG NLQIIVQTAK
0701: EYCEQLGVDA CIKLFEQFKS YEGLYFFLGA YLSSSEDPDI HFKYIEAAAK TGQIKEVERV TRESNFYDAE KTKNFLMETK LPDARPLINV CDRFGFVPDL
0801: THYLYTSNML RYIEGYVQKV NPGNAPLVVG QLLDDECPED FIKGLILSVR SLLPVEPLVE ECEKRNRLRL LTQFLEHLVS EGSQDVHVHN ALGKIIIDSN
0901: NNPEHFLTTN PYYDSRVVGK YCEKRDPTLA VVAYRRGQCD DELVNVSNKN SLFKLQARYV VERMNADLWE KVLNPENEFR RQLIDQVVST ALPESQSPDQ
1001: VSAAVKAFMT ADLPHELIEL LEKIVLQNSA FSGNFNLQNL LILTAIKADP SRVMDYINRL DNFDGPAVGE VAVEANLYEE AFAIFKKFNL NVQAVNVLLD
1101: NLRTIDRAVE FAFRVEEDAV WSQVAKAQLR EGLVSDAIES FIRADDSTHF LEVIKASEDA EVYHDLVRYL LMVRQNTKEP KVDSELIYAY AKIDRLGEIE
1201: EFILMPNVAN LPNVGDRLYD EALYEAAKII FAFISNWAKL AVTLVKLKQF QGAVDAARKA NSSKTWKEVC FACVDAEEFR LAQICGLNVI IQVDDLEEVS
1301: EFYQNRGCFN ELISLMESGL GLERAHMGIF TELGVLYARY RPEKLMEHIK LFSTRLNIPK LIRACDEQQH WMELTYLYIQ YDEFDNAATT VMNHSPEAWD
1401: HMQFKDIIVK VASVELYYKA VHFYLQEHPD ILNDLLNVLA LRVDHTRVVD IMRKAGHIRL VKPYLIAVQS NNVSAVNEAL NEIYVEEEDY DRLHESIDLH
1501: DNFDQIGLAQ KIEKHELLEM RRVAAYIYKK AGRWKQSIAL SKKDNLYKDC METCSQSGDR ELSEDLLVYF IEQGKKECFA SCLFVCYDII RPDVALELAW
1601: MNNMIDFAFP YLLQFIREYT GKVDELIKDK IEAQKEEKAK EKEEKDVIAQ QNMYAQLLPL ALPAPPMPGM GGGGYAPLTT PPMGGMGMPP MPPFGMPPMG
1701: GSSGSY
0101: KAKMKSHQMK EQVVFWKWIT PNTLGIVTQT SVYHWSVEGD GEPMKMFDRT ANLANNQIIN YRCDPNEKWL VLIGIAPGSA ERPQLVKGNM QLFSVDQQRS
0201: QALEAHAASF ATFRVAGNDK ESTLICFASK SLNAGQVTSK MHVIELGAQP GKPSFTKKQA DLFFPPDFAD DFPVSMQISN KYGLIYVITK LGLLFVYDLE
0301: TSTAVYRNRI SSDPIFLTTE ALSVGGFYAI NRRGQVLLAT INEAAIVPFV SGQLNNLELA VNLAKRGNLP GAEELVVKRF QELFSQTKYK EAAELAAESP
0401: RGILRTPDTV AKFQSVPVQA GQTPPLLQYF GTLLTRGKLN SYESLELSRL VVNQNKKNLL ENWLAEDKLE CSEELGDLVK TVDNDLALKI FIKARATPKV
0501: VAAFAERREF DKILIYSKQV GYTPDYMFLL QTILRADAQG AVNFALMMSQ MEGGCPVDYN TITDLFLQRN LIREATAFLL DVLKSNLPEH GYLQTKVLEI
0601: NLVTFPNVAD AILANGMFSH YDRPRIAQLC EKAGLFIRAL QHYSELPDIK RVIVNTHAIE PQALVEFFGT LSKEWALECM KDLLLVNLRG NLQIIVQTAK
0701: EYCEQLGVDA CIKLFEQFKS YEGLYFFLGA YLSSSEDPDI HFKYIEAAAK TGQIKEVERV TRESNFYDAE KTKNFLMETK LPDARPLINV CDRFGFVPDL
0801: THYLYTSNML RYIEGYVQKV NPGNAPLVVG QLLDDECPED FIKGLILSVR SLLPVEPLVE ECEKRNRLRL LTQFLEHLVS EGSQDVHVHN ALGKIIIDSN
0901: NNPEHFLTTN PYYDSRVVGK YCEKRDPTLA VVAYRRGQCD DELVNVSNKN SLFKLQARYV VERMNADLWE KVLNPENEFR RQLIDQVVST ALPESQSPDQ
1001: VSAAVKAFMT ADLPHELIEL LEKIVLQNSA FSGNFNLQNL LILTAIKADP SRVMDYINRL DNFDGPAVGE VAVEANLYEE AFAIFKKFNL NVQAVNVLLD
1101: NLRTIDRAVE FAFRVEEDAV WSQVAKAQLR EGLVSDAIES FIRADDSTHF LEVIKASEDA EVYHDLVRYL LMVRQNTKEP KVDSELIYAY AKIDRLGEIE
1201: EFILMPNVAN LPNVGDRLYD EALYEAAKII FAFISNWAKL AVTLVKLKQF QGAVDAARKA NSSKTWKEVC FACVDAEEFR LAQICGLNVI IQVDDLEEVS
1301: EFYQNRGCFN ELISLMESGL GLERAHMGIF TELGVLYARY RPEKLMEHIK LFSTRLNIPK LIRACDEQQH WMELTYLYIQ YDEFDNAATT VMNHSPEAWD
1401: HMQFKDIIVK VASVELYYKA VHFYLQEHPD ILNDLLNVLA LRVDHTRVVD IMRKAGHIRL VKPYLIAVQS NNVSAVNEAL NEIYVEEEDY DRLHESIDLH
1501: DNFDQIGLAQ KIEKHELLEM RRVAAYIYKK AGRWKQSIAL SKKDNLYKDC METCSQSGDR ELSEDLLVYF IEQGKKECFA SCLFVCYDII RPDVALELAW
1601: MNNMIDFAFP YLLQFIREYT GKVDELIKDK IEAQKEEKAK EKEEKDVIAQ QNMYAQLLPL ALPAPPMPGM GGGGYAPLTT PPMGGMGMPP MPPFGMPPMG
1701: GSSGSY
0001: MAAANAPITM KEVLTLPSIG INQQFITFTN VTMESDKYIC VRETSPQNSV VIIDMNMPMQ PLRRPITADS ALMNPNSKIL ALKAQVPGTT QDHLQIFNIE
0101: AKAKLKSHQM PEQVVFWKWI TPKMLGLVTQ NSVYHWSIEG DSEPVKMFDR TANLANNQII NYKCSPNEKW LVLIGIAPGS PERQQLVKGN MQLFSVDQQR
0201: SQALEAHAAS FAQFKVPGNE NPSILISFAS KSFNAGQITS KLHVIELGAQ PGKPSFTKKQ ADLFFPPDFA DDFPVAMQVS HKFNLIYVIT KLGLLFVYDL
0301: ETASAIYRNR ISPDPIFLTS EASSVGGFYA INRRGQVLLA TVNEATIIPF ISGQLNNLEL AVNLAKRGNL PGAENLVVQR FQELFAQTKY KEAAELAAES
0401: PQGILRTPDT VAKFQSVPVQ AGQTPPLLQY FGTLLTRGKL NSYESLELSR LVVNQNKKNL LENWLAEDKL ECSEELGDLV KTVDNDLALK IYIKARATPK
0501: VVAAFAERRE FDKILIYSKQ VGYTPDYLFL LQTILRTDPQ GAVNFALMMS QMEGGSPVDY NTITDLFLQR NLIREATSFL LDVLKPNLPE HAFLQTKVLE
0601: INLVTFPNVA DAVLANGMFT HYDRPRIAQL CEKAGLYIQS LKHYSELPDI KRVIVNTHAI EPQALVEFFG TLSSEWAMEC MKDLLLVNLR GNLQIIVQAC
0701: KEYCEQLGVD ACIKLFEQFK SYEGLYFFLG SYLSMSEDPE IHFKYIEAAA KTGQIKEVER VTRESNFYDA EKTKNFLMEA KLPDARPLIN VCDRFSFVPD
0801: LTHYLYTNNM LRYIEGYVQK VNPGNAPLVV GQLLDDECPE DFIKGLILSV RSLLPVEPLV EECEKRNRLR LLTQFLEHLV SEGSQDVHVH NALGKIIIDS
0901: NNNPEHFLTT NPYYDSKVVG KYCEKRDPTL AVVAYRRGQC DEELINVTNK NSLFKLQARY VVERMDGDLW DKVLDENNDY RRQLIDQVVS TALPESKSPE
1001: QVSAAVKAFM TADLPHELIE LLEKIVLQNS AFSGNFNLQN LLILTAIKAD PSRVMDYINR LDNFDGPAVG EVAVEAQLYE EAFAIFKKFN LNVQAVNVLL
1101: DNVRSIERAV EFAFRVEEDS VWSQVAKAQL REGLVSDAIE SFIRADDATH FLEVIRVSED TDVYDDLVKY LLMVRQKVKE PKVDSELIYA YAKIDRLGEI
1201: EEFILMPNVA NLQHVGDRLY DEALYEAAKI IYAFISNWGK LAVTLVKLQQ FQGAVDAARK ANSAKTWKEV CFACVDAEEF RLAQICGLNI IIQVDDLEEV
1301: SEYYQNRGCF NELISLMESG LGLERAHMGI FTELGVLYAR YRYEKLMEHI KLFSTRLNIP KLIRACDEQQ HWQELTYLYI QYDEFDNAAT TVMNHSPEAW
1401: EHMQFKDIVA KVANVELYYK AVHFYLQEHP DIINDLLNVL ALRLDHTRVV DIMRKAGHLR LIKPYMIAVQ SNNVSAVNEA LNEIYVEEED YDRLRESIDL
1501: HDSFDQIGLA QKIEKHELVE MRRVAAYIYK KAGRWKQSIA LSKKDNMYKD CMETASQSGE HELAEQLLVY FIEQGKKECF ATCLFVCYDL IRPDVALELA
1601: WINNMMDFAF PYLLQFIREY SGKVDELIKD KLEAQKEVKA KEQEEKDVIS QQNMYAQMLP LALPAPPMPG MGGGGGYGPP PQMGGMPGMP PMPPYGMPPM
1701: GGY
0101: AKAKLKSHQM PEQVVFWKWI TPKMLGLVTQ NSVYHWSIEG DSEPVKMFDR TANLANNQII NYKCSPNEKW LVLIGIAPGS PERQQLVKGN MQLFSVDQQR
0201: SQALEAHAAS FAQFKVPGNE NPSILISFAS KSFNAGQITS KLHVIELGAQ PGKPSFTKKQ ADLFFPPDFA DDFPVAMQVS HKFNLIYVIT KLGLLFVYDL
0301: ETASAIYRNR ISPDPIFLTS EASSVGGFYA INRRGQVLLA TVNEATIIPF ISGQLNNLEL AVNLAKRGNL PGAENLVVQR FQELFAQTKY KEAAELAAES
0401: PQGILRTPDT VAKFQSVPVQ AGQTPPLLQY FGTLLTRGKL NSYESLELSR LVVNQNKKNL LENWLAEDKL ECSEELGDLV KTVDNDLALK IYIKARATPK
0501: VVAAFAERRE FDKILIYSKQ VGYTPDYLFL LQTILRTDPQ GAVNFALMMS QMEGGSPVDY NTITDLFLQR NLIREATSFL LDVLKPNLPE HAFLQTKVLE
0601: INLVTFPNVA DAVLANGMFT HYDRPRIAQL CEKAGLYIQS LKHYSELPDI KRVIVNTHAI EPQALVEFFG TLSSEWAMEC MKDLLLVNLR GNLQIIVQAC
0701: KEYCEQLGVD ACIKLFEQFK SYEGLYFFLG SYLSMSEDPE IHFKYIEAAA KTGQIKEVER VTRESNFYDA EKTKNFLMEA KLPDARPLIN VCDRFSFVPD
0801: LTHYLYTNNM LRYIEGYVQK VNPGNAPLVV GQLLDDECPE DFIKGLILSV RSLLPVEPLV EECEKRNRLR LLTQFLEHLV SEGSQDVHVH NALGKIIIDS
0901: NNNPEHFLTT NPYYDSKVVG KYCEKRDPTL AVVAYRRGQC DEELINVTNK NSLFKLQARY VVERMDGDLW DKVLDENNDY RRQLIDQVVS TALPESKSPE
1001: QVSAAVKAFM TADLPHELIE LLEKIVLQNS AFSGNFNLQN LLILTAIKAD PSRVMDYINR LDNFDGPAVG EVAVEAQLYE EAFAIFKKFN LNVQAVNVLL
1101: DNVRSIERAV EFAFRVEEDS VWSQVAKAQL REGLVSDAIE SFIRADDATH FLEVIRVSED TDVYDDLVKY LLMVRQKVKE PKVDSELIYA YAKIDRLGEI
1201: EEFILMPNVA NLQHVGDRLY DEALYEAAKI IYAFISNWGK LAVTLVKLQQ FQGAVDAARK ANSAKTWKEV CFACVDAEEF RLAQICGLNI IIQVDDLEEV
1301: SEYYQNRGCF NELISLMESG LGLERAHMGI FTELGVLYAR YRYEKLMEHI KLFSTRLNIP KLIRACDEQQ HWQELTYLYI QYDEFDNAAT TVMNHSPEAW
1401: EHMQFKDIVA KVANVELYYK AVHFYLQEHP DIINDLLNVL ALRLDHTRVV DIMRKAGHLR LIKPYMIAVQ SNNVSAVNEA LNEIYVEEED YDRLRESIDL
1501: HDSFDQIGLA QKIEKHELVE MRRVAAYIYK KAGRWKQSIA LSKKDNMYKD CMETASQSGE HELAEQLLVY FIEQGKKECF ATCLFVCYDL IRPDVALELA
1601: WINNMMDFAF PYLLQFIREY SGKVDELIKD KLEAQKEVKA KEQEEKDVIS QQNMYAQMLP LALPAPPMPG MGGGGGYGPP PQMGGMPGMP PMPPYGMPPM
1701: GGY
Arabidopsis Description
CHC2Clathrin heavy chain 2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WLB5]
SUBAcon: [plasma membrane,plastid,cytosol]
SUBAcon: [plasma membrane,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.