Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, nucleus
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 2
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| endoplasmic reticulum:
27224218
nucleus: 28499913 |
msms PMID:
28499913
doi
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH72708 | Soybean | endoplasmic reticulum, mitochondrion | 98.18 | 98.01 |
| KRH28591 | Soybean | endoplasmic reticulum | 94.66 | 94.71 |
| KRH76885 | Soybean | endoplasmic reticulum | 94.6 | 94.65 |
| KRG97711 | Soybean | endoplasmic reticulum, nucleus | 91.43 | 91.59 |
| KRH31163 | Soybean | endoplasmic reticulum | 91.37 | 91.53 |
| KRH14933 | Soybean | nucleus | 90.49 | 90.65 |
| KRH73205 | Soybean | nucleus | 90.72 | 90.51 |
| KXG22761 | Sorghum | plastid | 89.67 | 89.3 |
| EES07849 | Sorghum | plastid | 89.55 | 89.23 |
| TraesCS5D01G158800.1 | Wheat | plastid | 88.9 | 88.64 |
| TraesCS5A01G153500.1 | Wheat | golgi, unclear | 88.84 | 88.58 |
| TraesCS5B01G152300.1 | Wheat | unclear | 88.78 | 88.52 |
| TraesCS4A01G182300.1 | Wheat | extracellular, golgi | 88.78 | 88.16 |
| TraesCS4D01G130900.1 | Wheat | golgi, unclear | 88.67 | 88.05 |
| TraesCS4B01G136100.2 | Wheat | golgi, unclear | 88.61 | 87.12 |
| Os11t0104900-00 | Rice | plasma membrane | 35.64 | 86.84 |
| Os12t0104766-00 | Rice | plasma membrane | 28.77 | 84.78 |
| HORVU4Hr1G024710.4 | Barley | plastid | 88.61 | 84.73 |
| Os11t0104866-00 | Rice | plasma membrane | 28.66 | 84.43 |
| HORVU5Hr1G048010.1 | Barley | plastid | 88.67 | 83.75 |
| KRH12961 | Soybean | cytosol | 4.29 | 76.04 |
| KRH25762 | Soybean | cytosol | 4.11 | 72.92 |
| Os12t0104800-01 | Rice | cytosol | 4.93 | 68.85 |
Protein Annotations
Description
hypothetical protein
Coordinates
chr14:-:46086313..46099584
Molecular Weight (calculated)
192817.0 Da
IEP (calculated)
5.017
GRAVY (calculated)
-0.152
Length
1703 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAANAPITMK ETFTLGSVGI NQQFITFTHV TMESDKYICV RETGPQNSVV IIDMSMPMQP LRRPITADSA LMNPNSRILA LKAQVPGTTQ DHLQVFNIET
0101: KAKMNSHQMK EQVVFWKWIT PNTLGIVTQM SVYHWSVEGN GEPMKMFDRT ANLANNQIIS YRCDPNEKWL VLIGIAPGSA ERPQLVKGNM QLFSVDQQRS
0201: QALEAHAASF ASFRVAGNDK DSTLICFASK SMNAGQVTSK MHVIELGAQP GKPSFTKKQA DLFFPPDFAD DFPVSMQISN KYGLIYVITK LGLLFVYDLE
0301: TSTAVYRNRI SPDPIFLTTE APSVGGFYAI NRRGQVLLAT INEAAIVPFV SGQLNNLELA VNLAKRGNLP GAEELVVKRF QELFAQTKYK EAAELAAESP
0401: QGILRTPDTV AKFQSVPVQA GQTPPLLQYF GTLLTRGKLN SYESLELSRL VVNQNKKNLL ENWLAEDKLE CSEELGDLVK TVDNDLALKI FIKARATPKV
0501: VAAFAERREF DKILIYSKQV GYTPDYMFLL QTILRADAQG AVNFALMMSQ MEGGCPVDYN TITDLFLQRN LIREATAFLL DVLKPNLPEH GYLQTKVLEI
0601: NLVTFPNVAD AILANGMFSH YDRPRIAQLC EKAGLFIRAL QHYSELPDIK RVIVNTHAIE PQALVEFFGT LSKEWALECM KDLLLVNLRG NLQIIVQTAK
0701: EYCEQLGVDA CIKLFEQFKS YEGLYFFLGA YLSSSEDPDI HFKYIEAAAK TGQIKEVERV TRESNFYDAE KTKNFLMETK LPDARPLINV CDRFGFVPDL
0801: THYLYTSNML RYIEGYVQKV NPGNAPLVVG QLLDDECPED FIKGLILSVR SLLPVEPLVE ECEKRNRLRL LTQFLEHLVS EGSQDVHVHN ALGKIIIDSN
0901: NNPEHFLTTN PYYDSRVVGK YCEKRDPTLA VVAYRRGQCD DELVNVTNKN SLFKLQARYV VERMDADLWE KVLNPENEFR RQLIDQVVST ALPESQSPDQ
1001: VSAAVKAFMT ADLPHELIEL LEKIVLQNSA FSGNFNLQNL LILTAIKADP SRVMDYINRL DNFDGPAVGE VAVEANLYEE AFAIFKKFNL NVQAVNVLLD
1101: NLRTIDRAVE FAFRVEEEAV WSQVAKAQLR EGLVSDAIES FIRADDSTHF LEVIKASEDA EVYHDLVRYL LMVRQNTKEP KVDSELIYAY AKIDQLGEIE
1201: EFILMPNVAN LPNVGDRLYD EALYEAAKII FAFISNWAKL AVTLVKLKQF QGAVDAARKA NSSKTWKEVC FACVDAEEFR LAQICGLNVI IQVDDLEEVS
1301: EFYQNRGCFN ELISLMESGL GLERAHMGIF TELGVLYARY RPEKLMEHIK LFSTRLNIPK LIRACDEQQH WMELTYLYIQ YDEFDNAATT VMNHSPEAWD
1401: HMQFKDIIVK VASVELYYKA VHFYLQEHPD IINDLLNVLA LRVDHTRVVD IMRKAGHIRL VKPYLVAVQS NNVSAVNEAL NEIYVEEEDY DRLHESIDLH
1501: DNFDQIGLAQ KIEKHELLEM RRVAAYIYKK AGRWKQSIAL SKKDNLYKDC METCSQSGDR ELSEDLLVYF IEQEKKECFA SCLFVCYDII RPDVALELAW
1601: MNNMIDFAFP YLLQFIREYT GKVDELIKDK IEAQKVEKAK EKEEKEVLAQ QNMYAQLLPL ALPAPPSMGG GGYAPPTPPI GGMGMPPMPP FGMPPMGGGS
1701: GSY
0101: KAKMNSHQMK EQVVFWKWIT PNTLGIVTQM SVYHWSVEGN GEPMKMFDRT ANLANNQIIS YRCDPNEKWL VLIGIAPGSA ERPQLVKGNM QLFSVDQQRS
0201: QALEAHAASF ASFRVAGNDK DSTLICFASK SMNAGQVTSK MHVIELGAQP GKPSFTKKQA DLFFPPDFAD DFPVSMQISN KYGLIYVITK LGLLFVYDLE
0301: TSTAVYRNRI SPDPIFLTTE APSVGGFYAI NRRGQVLLAT INEAAIVPFV SGQLNNLELA VNLAKRGNLP GAEELVVKRF QELFAQTKYK EAAELAAESP
0401: QGILRTPDTV AKFQSVPVQA GQTPPLLQYF GTLLTRGKLN SYESLELSRL VVNQNKKNLL ENWLAEDKLE CSEELGDLVK TVDNDLALKI FIKARATPKV
0501: VAAFAERREF DKILIYSKQV GYTPDYMFLL QTILRADAQG AVNFALMMSQ MEGGCPVDYN TITDLFLQRN LIREATAFLL DVLKPNLPEH GYLQTKVLEI
0601: NLVTFPNVAD AILANGMFSH YDRPRIAQLC EKAGLFIRAL QHYSELPDIK RVIVNTHAIE PQALVEFFGT LSKEWALECM KDLLLVNLRG NLQIIVQTAK
0701: EYCEQLGVDA CIKLFEQFKS YEGLYFFLGA YLSSSEDPDI HFKYIEAAAK TGQIKEVERV TRESNFYDAE KTKNFLMETK LPDARPLINV CDRFGFVPDL
0801: THYLYTSNML RYIEGYVQKV NPGNAPLVVG QLLDDECPED FIKGLILSVR SLLPVEPLVE ECEKRNRLRL LTQFLEHLVS EGSQDVHVHN ALGKIIIDSN
0901: NNPEHFLTTN PYYDSRVVGK YCEKRDPTLA VVAYRRGQCD DELVNVTNKN SLFKLQARYV VERMDADLWE KVLNPENEFR RQLIDQVVST ALPESQSPDQ
1001: VSAAVKAFMT ADLPHELIEL LEKIVLQNSA FSGNFNLQNL LILTAIKADP SRVMDYINRL DNFDGPAVGE VAVEANLYEE AFAIFKKFNL NVQAVNVLLD
1101: NLRTIDRAVE FAFRVEEEAV WSQVAKAQLR EGLVSDAIES FIRADDSTHF LEVIKASEDA EVYHDLVRYL LMVRQNTKEP KVDSELIYAY AKIDQLGEIE
1201: EFILMPNVAN LPNVGDRLYD EALYEAAKII FAFISNWAKL AVTLVKLKQF QGAVDAARKA NSSKTWKEVC FACVDAEEFR LAQICGLNVI IQVDDLEEVS
1301: EFYQNRGCFN ELISLMESGL GLERAHMGIF TELGVLYARY RPEKLMEHIK LFSTRLNIPK LIRACDEQQH WMELTYLYIQ YDEFDNAATT VMNHSPEAWD
1401: HMQFKDIIVK VASVELYYKA VHFYLQEHPD IINDLLNVLA LRVDHTRVVD IMRKAGHIRL VKPYLVAVQS NNVSAVNEAL NEIYVEEEDY DRLHESIDLH
1501: DNFDQIGLAQ KIEKHELLEM RRVAAYIYKK AGRWKQSIAL SKKDNLYKDC METCSQSGDR ELSEDLLVYF IEQEKKECFA SCLFVCYDII RPDVALELAW
1601: MNNMIDFAFP YLLQFIREYT GKVDELIKDK IEAQKVEKAK EKEEKEVLAQ QNMYAQLLPL ALPAPPSMGG GGYAPPTPPI GGMGMPPMPP FGMPPMGGGS
1701: GSY
0001: MAAANAPIIM KEVLTLPSVG IGQQFITFTN VTMESDKYIC VRETAPQNSV VIIDMNMPMQ PLRRPITADS ALMNPNSRIL ALKAQVPGTT QDHLQIFNIE
0101: AKAKLKSHQM PEQVAFWKWI TPKMLGLVTQ TSVYHWSIEG DSEPVKMFDR TANLANNQII NYKCSPNEKW LVLIGIAPGS PERPQLVKGN MQLFSVDQQR
0201: SQALEAHAAS FAQFKVPGNE NPSILISFAS KSFNAGQITS KLHVIELGAQ PGKPSFTKKQ ADLFFPPDFA DDFPVAMQVS HKFNLIYVIT KLGLLFVYDL
0301: ETASAIYRNR ISPDPIFLTS EASSVGGFYA INRRGQVLLA TVNEATIIPF ISGQLNNLEL AVNLAKRGNL PGAENLVVQR FQELFAQTKY KEAAELAAES
0401: PQGILRTPDT VAKFQSVPVQ AGQTPPLLQY FGTLLTRGKL NSYESLELSR LVVNQNKKNL LENWLAEDKL ECSEELGDLV KTVDNDLALK IYIKARATPK
0501: VVAAFAERRE FDKILIYSKQ VGYTPDYMFL LQTILRTDPQ GAVNFALMMS QMEGGCPVDY NTITDLFLQR NLIREATAFL LDVLKPNLPE HAFLQTKVLE
0601: INLVTFPNVA DAILANGMFS HYDRPRVAQL CEKAGLYIQS LKHYSELPDI KRVIVNTHAI EPQALVEFFG TLSSEWAMEC MKDLLLVNLR GNLQIIVQAC
0701: KEYCEQLGVD ACIKLFEQFK SYEGLYFFLG SYLSMSEDPE IHFKYIEAAA KTGQIKEVER VTRESNFYDA EKTKNFLMEA KLPDARPLIN VCDRFGFVPD
0801: LTHYLYTNNM LRYIEGYVQK VNPGNAPLVV GQLLDDECPE DFIKGLILSV RSLLPVEPLV AECEKRNRLR LLTQFLEHLV SEGSQDVHVH NALGKIIIDS
0901: NNNPEHFLTT NPYYDSKVVG KYCEKRDPTL AVVAYRRGQC DEELINVTNK NSLFKLQARY VVERMDGDLW EKVLTEENEY RRQLIDQVVS TALPESKSPE
1001: QVSAAVKAFM TADLPHELIE LLEKIVLQNS AFSGNFNLQN LLILTAIKAD PSRVMDYINR LDNFDGPAVG EVAVDAQLYE EAFAIFKKFN LNVQAVNVLL
1101: DNVRSIERAV EFAFRVEEDA VWSQVAKAQL REGLVSDAIE SFIRADDTTQ FLEVIRASED TNVYDDLVRY LLMVRQKVKE PKVDSELIYA YAKIERLGEI
1201: EEFILMPNVA NLQHVGDRLY DEALYEAAKI IYAFISNWAK LAVTLVKLQQ FQGAVDAARK ANSAKTWKEV CFACVDAEEF RLAQICGLNI IIQVDDLEEV
1301: SEYYQNRGCF NELISLMESG LGLERAHMGI FTELGVLYAR YRYEKLMEHI KLFSTRLNIP KLIRACDEQQ HWQELTYLYI QYDEFDNAAT TVMNHSPEAW
1401: EHMQFKDIVA KVANVELYYK AVHFYLQEHP DIINDLLNVL ALRLDHTRVV DIMRKAGHLR LIKPYMVAVQ SNNVSAVNEA LNEIYAEEED YDRLRESIDL
1501: HDSFDQIGLA QKIEKHELVE MRRVAAYIYK KAGRWKQSIA LSKKDNMYKD CMETASQSGD HDLAEQLLVY FIEQGKKECF ATCLFVCYDL IRPDVALELA
1601: WINNMIDFAF PYLLQFIREY SGKVDELIKD KLEAQKEVKA KEQEEKDVMS QQNMYAQLLP LALPAPPMPG MGGGGYGPPP QMGGMPGMSG MPPMPPYGMP
1701: PMGGY
0101: AKAKLKSHQM PEQVAFWKWI TPKMLGLVTQ TSVYHWSIEG DSEPVKMFDR TANLANNQII NYKCSPNEKW LVLIGIAPGS PERPQLVKGN MQLFSVDQQR
0201: SQALEAHAAS FAQFKVPGNE NPSILISFAS KSFNAGQITS KLHVIELGAQ PGKPSFTKKQ ADLFFPPDFA DDFPVAMQVS HKFNLIYVIT KLGLLFVYDL
0301: ETASAIYRNR ISPDPIFLTS EASSVGGFYA INRRGQVLLA TVNEATIIPF ISGQLNNLEL AVNLAKRGNL PGAENLVVQR FQELFAQTKY KEAAELAAES
0401: PQGILRTPDT VAKFQSVPVQ AGQTPPLLQY FGTLLTRGKL NSYESLELSR LVVNQNKKNL LENWLAEDKL ECSEELGDLV KTVDNDLALK IYIKARATPK
0501: VVAAFAERRE FDKILIYSKQ VGYTPDYMFL LQTILRTDPQ GAVNFALMMS QMEGGCPVDY NTITDLFLQR NLIREATAFL LDVLKPNLPE HAFLQTKVLE
0601: INLVTFPNVA DAILANGMFS HYDRPRVAQL CEKAGLYIQS LKHYSELPDI KRVIVNTHAI EPQALVEFFG TLSSEWAMEC MKDLLLVNLR GNLQIIVQAC
0701: KEYCEQLGVD ACIKLFEQFK SYEGLYFFLG SYLSMSEDPE IHFKYIEAAA KTGQIKEVER VTRESNFYDA EKTKNFLMEA KLPDARPLIN VCDRFGFVPD
0801: LTHYLYTNNM LRYIEGYVQK VNPGNAPLVV GQLLDDECPE DFIKGLILSV RSLLPVEPLV AECEKRNRLR LLTQFLEHLV SEGSQDVHVH NALGKIIIDS
0901: NNNPEHFLTT NPYYDSKVVG KYCEKRDPTL AVVAYRRGQC DEELINVTNK NSLFKLQARY VVERMDGDLW EKVLTEENEY RRQLIDQVVS TALPESKSPE
1001: QVSAAVKAFM TADLPHELIE LLEKIVLQNS AFSGNFNLQN LLILTAIKAD PSRVMDYINR LDNFDGPAVG EVAVDAQLYE EAFAIFKKFN LNVQAVNVLL
1101: DNVRSIERAV EFAFRVEEDA VWSQVAKAQL REGLVSDAIE SFIRADDTTQ FLEVIRASED TNVYDDLVRY LLMVRQKVKE PKVDSELIYA YAKIERLGEI
1201: EEFILMPNVA NLQHVGDRLY DEALYEAAKI IYAFISNWAK LAVTLVKLQQ FQGAVDAARK ANSAKTWKEV CFACVDAEEF RLAQICGLNI IIQVDDLEEV
1301: SEYYQNRGCF NELISLMESG LGLERAHMGI FTELGVLYAR YRYEKLMEHI KLFSTRLNIP KLIRACDEQQ HWQELTYLYI QYDEFDNAAT TVMNHSPEAW
1401: EHMQFKDIVA KVANVELYYK AVHFYLQEHP DIINDLLNVL ALRLDHTRVV DIMRKAGHLR LIKPYMVAVQ SNNVSAVNEA LNEIYAEEED YDRLRESIDL
1501: HDSFDQIGLA QKIEKHELVE MRRVAAYIYK KAGRWKQSIA LSKKDNMYKD CMETASQSGD HDLAEQLLVY FIEQGKKECF ATCLFVCYDL IRPDVALELA
1601: WINNMIDFAF PYLLQFIREY SGKVDELIKD KLEAQKEVKA KEQEEKDVMS QQNMYAQLLP LALPAPPMPG MGGGGYGPPP QMGGMPGMSG MPPMPPYGMP
1701: PMGGY
Arabidopsis Description
CHC1Clathrin heavy chain 1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WNJ6]
SUBAcon: [plasma membrane,cytosol]
SUBAcon: [plasma membrane,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.