Factsheet for TraesCS7B01G173700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G239300.1
TraesCS4B01G075600.1
TraesCS4D01G074300.1
TraesCS6A01G306500.1
TraesCS6B01G334900.1
TraesCS6D01G285600.1
TraesCS7B01G091900.1
TraesCS7D01G187600.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G35250.1	TraesCS4A01G239300.1	AT1G60080.1	21798944
AT4G35250.1	TraesCS4B01G075600.1	AT1G60080.1	21798944
AT4G35250.1	TraesCS4D01G074300.1	AT1G60080.1	21798944
AT4G35250.1	TraesCS6A01G306500.1	AT3G47620.1	21798944
AT4G35250.1	TraesCS6B01G334900.1	AT3G47620.1	21798944
AT4G35250.1	TraesCS6D01G285600.1	AT3G47620.1	21798944
AT4G35250.1	TraesCS7B01G091900.1	AT3G47620.1	21798944
AT4G35250.1	TraesCS7D01G187600.1	AT3G47620.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G276000.1	Wheat	plastid	99.48	99.48
Os08t0553800-03	Rice	plasma membrane, plastid	86.6	87.05
EES14101	Sorghum	plastid	84.54	85.19
GSMUA_Achr10P...	Banana	cytosol	76.55	84.38
Zm00001d031997_P001	Maize	plastid	82.99	83.64
TraesCS7D01G275900.1	Wheat	mitochondrion, plastid	89.95	81.54
PGSC0003DMT400048015	Potato	plastid	77.06	77.46
CDY17531	Canola	plastid	78.35	76.96
Solyc01g112060.2.1	Tomato	plastid	76.55	76.94
AT4G35250.1	Thale cress	plastid	78.09	76.71
Bra020809.1-P	Field mustard	plastid	78.09	76.71
CDY66582	Canola	plastid	78.09	76.71
KRH51337	Soybean	cytosol, nucleus	67.27	74.79
VIT_03s0038g03250.t01	Wine grape	plastid	76.29	74.56
KRH60638	Soybean	nucleus	75.52	73.99

Protein Annotations

MapMan:1.1.1.3.7.1	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003743
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006091
GO:GO:0006412	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507
GO:GO:0009534	GO:GO:0009536	GO:GO:0009579	GO:GO:0009987	GO:GO:0010207	GO:GO:0015979
GO:GO:0016043	GO:GO:0019538	InterPro:NAD(P)-bd_dom_sf	InterPro:NmrA-like	PFAM:PF05368	PANTHER:PTHR14194
PANTHER:PTHR14194:SF36	SUPFAM:SSF51735	EnsemblPlantsGene:TraesCS7B01G173700	EnsemblPlants:TraesCS7B01G173700.1	TIGR:cd05243	SEG:seg

Description

No Description!

Coordinates

chr7B:-:244756157..244759456

Molecular Weight (calculated)

42746.6 Da

IEP (calculated)

9.088

GRAVY (calculated)

-0.081

Length

388 amino acids

Sequence
(BLAST)

001: MATSTSLAAA LPSRVTSPGR RAALSCTTSR ARPRPHPARA VSSSGPRCRL VVTCNAQAAA PISIGQGTPV RPTSVLVVGA TGTLGRQVVR RALDEGYDVR
101: CLVRPRPAPA DFLRDWGATV VNADLSKPET IPATLVGVHT VIDCATGRPE EPIRTVDWEG KVALIQCAKA MGIQKYVFYS IHNCDKHPEV PLMEIKYCTE
201: RFIQDTGLDY TIIRLCGFMQ GLIGQYAVPI LEEKSVWGTD APTRIAYMDT QDVARLTFVA LRNEKASKKL LTFAGPRAWT TQEVITLCER LAGQDANVTT
301: VPVAVLRFTR QLTRFFQWTN DVADRLAFSE VLSSDTVFSA PMNETYQLLG VEAKDILTLE KYLQDYFSNI LKKLKGLKAQ SKQSDIYF

Best Arabidopsis Sequence Match ( AT4G35250.1 )
(BLAST)

001: MASLRLPAQL VTRGNLIHHN SSSSSSGRLS WRRSLTPENT IPLFPSSSSS SLNRERSIVV PVTCSAAAVN LAPGTPVRPT SILVVGATGT LGRQIVRRAL
101: DEGYDVRCLV RPRPAPADFL RDWGATVVNA DLSKPETIPA TLVGIHTVID CATGRPEEPI KTVDWEGKVA LIQCAKAMGI QKYVFYSIHN CDKHPEVPLM
201: EIKYCTEKFL QESGLNHITI RLCGFMQGLI GQYAVPILEE KSVWGTDAPT RVAYMDTQDI ARLTLIALRN EKINGKLLTF AGPRAWTTQE VITLCERLAG
301: QDANVTTVPV SVLRVTRQLT RFFQWTNDVA DRLAFSEVLS SDTVFSAPMT ETNSLLGVDQ KDMVTLEKYL QDYFSNILKK LKDLKAQSKQ SDIYF

Arabidopsis Description

HCF244 [Source:UniProtKB/TrEMBL;Acc:A0A178UXV2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.