Factsheet for Bra020809.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra015501.1-P
Bra018126.1-P
Bra027816.1-P
Bra030653.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G35250.1	Bra015501.1-P	AT1G06460.1	21798944
AT4G35250.1	Bra030653.1-P	AT1G06460.1	21798944
AT4G35250.1	Bra027816.1-P	AT1G60080.1	21798944
AT4G35250.1	Bra018126.1-P	AT3G47620.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66582	Canola	plastid	100.0	100.0
CDY17531	Canola	plastid	99.24	99.24
AT4G35250.1	Thale cress	plastid	94.43	94.43
GSMUA_Achr10P...	Banana	cytosol	75.44	84.66
EES14101	Sorghum	plastid	77.97	80.0
PGSC0003DMT400048015	Potato	plastid	77.72	79.53
Solyc01g112060.2.1	Tomato	plastid	77.47	79.27
VIT_03s0038g03250.t01	Wine grape	plastid	79.49	79.09
Zm00001d031997_P001	Maize	plastid	76.71	78.7
KRH60638	Soybean	nucleus	78.48	78.28
Os08t0553800-03	Rice	plasma membrane, plastid	76.46	78.24
TraesCS7A01G276000.1	Wheat	plastid	76.71	78.09
TraesCS7B01G173700.1	Wheat	plastid	76.71	78.09
KRH51337	Soybean	cytosol, nucleus	68.1	77.08
TraesCS7D01G275900.1	Wheat	mitochondrion, plastid	77.47	71.5

Protein Annotations

MapMan:1.1.1.3.7.1	Gene3D:3.40.50.720	EnsemblPlantsGene:Bra020809	EnsemblPlants:Bra020809.1	EnsemblPlants:Bra020809.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003743	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006091	GO:GO:0006412	GO:GO:0006413	GO:GO:0008135
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009534	GO:GO:0009536
GO:GO:0009579	GO:GO:0009987	GO:GO:0010207	GO:GO:0015979	GO:GO:0016043	GO:GO:0019538
UniProt:M4DWB5	InterPro:NAD(P)-bd_dom_sf	InterPro:NmrA-like	PFAM:PF05368	PANTHER:PTHR14194	PANTHER:PTHR14194:SF36
SUPFAM:SSF51735	UniParc:UPI0002545FF1	SEG:seg	:	:	:

Description

AT4G35250 (E=8e-204) | vestitone reductase-related

Coordinates

chrA08:+:12001621..12003612

Molecular Weight (calculated)

43587.6 Da

IEP (calculated)

8.470

GRAVY (calculated)

-0.088

Length

395 amino acids

Sequence
(BLAST)

001: MASLRLPAQL VTRGTLNHHN SSSSAAPCVS LSWRRSLTPD NSFPNLPSSS PLNRKPSTVV PVTCSAAAVN LAPGTPVRPT SILVVGATGT LGRQIVRRAL
101: DEGYDVRCLV RPRPAPADFL RDWGATVVNA DLSKPETIPA TLVGVHTVID CATGRPEEPI KTVDWEGKVA LIQCAKAMGI QKYVFYSIHN CDKHPEVPLM
201: EIKYCTEKFL QESGLNHITI RLCGFMQGLI GQYAVPILEE KSVWGTDAPT RVAYMDTQDI ARLTLIALRN EKVNGKLLTF AGPRAWTTQE VITLCERLAG
301: QDANVTTVPV SVLRVTRQLT RFFQWTNDVA DRLAFTEVLS SDTVFSVPMT ETNSLLGVDQ KDLVTLEKYL QDYFSNILKK LKDLKAQSKQ SDIYF

Best Arabidopsis Sequence Match ( AT4G35250.1 )
(BLAST)

001: MASLRLPAQL VTRGNLIHHN SSSSSSGRLS WRRSLTPENT IPLFPSSSSS SLNRERSIVV PVTCSAAAVN LAPGTPVRPT SILVVGATGT LGRQIVRRAL
101: DEGYDVRCLV RPRPAPADFL RDWGATVVNA DLSKPETIPA TLVGIHTVID CATGRPEEPI KTVDWEGKVA LIQCAKAMGI QKYVFYSIHN CDKHPEVPLM
201: EIKYCTEKFL QESGLNHITI RLCGFMQGLI GQYAVPILEE KSVWGTDAPT RVAYMDTQDI ARLTLIALRN EKINGKLLTF AGPRAWTTQE VITLCERLAG
301: QDANVTTVPV SVLRVTRQLT RFFQWTNDVA DRLAFSEVLS SDTVFSAPMT ETNSLLGVDQ KDMVTLEKYL QDYFSNILKK LKDLKAQSKQ SDIYF

Arabidopsis Description

HCF244 [Source:UniProtKB/TrEMBL;Acc:A0A178UXV2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.