CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER88112
EES07255
EES15299

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G35250.1	EES15299	AT1G60080.1	21798944
AT4G35250.1	EER88112	AT3G47620.1	21798944
AT4G35250.1	EES07255	AT3G47620.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031997_P001	Maize	plastid	96.1	96.1
Os08t0553800-03	Rice	plasma membrane, plastid	89.61	89.38
GSMUA_Achr10P...	Banana	cytosol	78.96	86.36
TraesCS7A01G276000.1	Wheat	plastid	85.19	84.54
TraesCS7B01G173700.1	Wheat	plastid	85.19	84.54
PGSC0003DMT400048015	Potato	plastid	79.74	79.53
Solyc01g112060.2.1	Tomato	plastid	79.48	79.27
AT4G35250.1	Thale cress	plastid	80.78	78.73
Bra020809.1-P	Field mustard	plastid	80.0	77.97
CDY66582	Canola	plastid	80.0	77.97
CDY17531	Canola	plastid	79.74	77.72
KRH51337	Soybean	cytosol, nucleus	69.87	77.08
KRH60638	Soybean	nucleus	78.7	76.52
TraesCS7D01G275900.1	Wheat	mitochondrion, plastid	84.68	76.17
VIT_03s0038g03250.t01	Wine grape	plastid	77.66	75.31

Protein Annotations

MapMan:1.1.1.3.7.1	Gene3D:3.40.50.720	EntrezGene:8058013	UniProt:C5YNB9	EnsemblPlants:EES14101	ProteinID:EES14101
ProteinID:EES14101.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003743	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006091	GO:GO:0006412
GO:GO:0006413	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507
GO:GO:0009534	GO:GO:0009536	GO:GO:0009579	GO:GO:0009987	GO:GO:0010207	GO:GO:0015979
GO:GO:0016043	GO:GO:0019538	InterPro:NAD(P)-bd_dom_sf	InterPro:NmrA-like	PFAM:PF05368	PANTHER:PTHR14194
PANTHER:PTHR14194:SF36	EnsemblPlantsGene:SORBI_3007G173800	SUPFAM:SSF51735	UniParc:UPI0001A87C31	RefSeq:XP_002444606.1	SEG:seg

Description

hypothetical protein

Coordinates

chr7:+:60870267..60872774

Molecular Weight (calculated)

42638.6 Da

IEP (calculated)

8.915

GRAVY (calculated)

-0.072

Length

385 amino acids

Sequence
(BLAST)

001: MASTSLAALP SQLASPGRLR RRAALSSASR SNLLLHRATK GGSRCRLAVT CNAQAVAPTS IAQGTPVRPT SILVVGATGT LGRQVVRRAL DEGYDVRCLV
101: RPRPAPADFL RDWGATVVNA DLSKPETIPA TLVGIHTVID CATGRPEEPI RTVDWEGKVA LIQCAKAMGI QKYVFYSIHN CDKHPEVPLM EIKYCTEKFI
201: QDSGLDYIII RLCGFMQGLI GQYAVPILEE KSVWGTDAPT RIAYMDTQDV ARLTFIAMRN EKANRKLMTF AGPRAWTTQE VITLCERLAG QDANVTTVPV
301: AVLRFTRQLT RFFQWTNDVA DRLAFSEVLS SDTVFSAPMN ETYQLLGVDG NDILSLEKYL QDYFTNILKK LKDLKAQSKQ TDIFF

Best Arabidopsis Sequence Match ( AT4G35250.1 )
(BLAST)

001: MASLRLPAQL VTRGNLIHHN SSSSSSGRLS WRRSLTPENT IPLFPSSSSS SLNRERSIVV PVTCSAAAVN LAPGTPVRPT SILVVGATGT LGRQIVRRAL
101: DEGYDVRCLV RPRPAPADFL RDWGATVVNA DLSKPETIPA TLVGIHTVID CATGRPEEPI KTVDWEGKVA LIQCAKAMGI QKYVFYSIHN CDKHPEVPLM
201: EIKYCTEKFL QESGLNHITI RLCGFMQGLI GQYAVPILEE KSVWGTDAPT RVAYMDTQDI ARLTLIALRN EKINGKLLTF AGPRAWTTQE VITLCERLAG
301: QDANVTTVPV SVLRVTRQLT RFFQWTNDVA DRLAFSEVLS SDTVFSAPMT ETNSLLGVDQ KDMVTLEKYL QDYFSNILKK LKDLKAQSKQ SDIYF

Arabidopsis Description

HCF244 [Source:UniProtKB/TrEMBL;Acc:A0A178UXV2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.