Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 5
- nucleus 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G229700.1 | Wheat | mitochondrion | 98.23 | 98.23 |
| TraesCS1D01G232300.1 | Wheat | mitochondrion | 96.46 | 98.2 |
| HORVU1Hr1G058580.1 | Barley | mitochondrion | 93.81 | 95.5 |
| GSMUA_Achr2P06060_001 | Banana | nucleus | 44.69 | 63.52 |
| EES05056 | Sorghum | mitochondrion | 82.3 | 62.0 |
| VIT_00s2171g00010.t01 | Wine grape | mitochondrion | 44.25 | 61.73 |
| KRH07362 | Soybean | mitochondrion | 49.12 | 59.36 |
| Zm00001d016490_P001 | Maize | mitochondrion | 78.76 | 59.33 |
| AT5G48530.1 | Thale cress | mitochondrion | 49.12 | 56.92 |
| KRH66195 | Soybean | mitochondrion | 55.75 | 54.78 |
| AT3G07440.1 | Thale cress | mitochondrion | 56.64 | 54.47 |
| CDX86300 | Canola | mitochondrion | 55.75 | 53.85 |
| Bra037481.1-P | Field mustard | mitochondrion | 55.75 | 53.85 |
| CDX85344 | Canola | mitochondrion | 55.31 | 53.42 |
| Solyc09g058990.2.1 | Tomato | mitochondrion | 55.75 | 51.85 |
| Os02t0478500-01 | Rice | nucleus | 83.19 | 51.79 |
| VIT_00s0337g00070.t01 | Wine grape | mitochondrion | 14.16 | 34.41 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G244400.2 | EnsemblPlantsGene:TraesCS1B01G244400 | PANTHER:PTHR36031 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr1B:-:433601168..433606998
Molecular Weight (calculated)
27308.9 Da
IEP (calculated)
10.077
GRAVY (calculated)
-1.400
Length
226 amino acids
Sequence
(BLAST)
(BLAST)
001: MTQRMLRCVY TQRRWAHRRG GFVTGGTGWS QKARPAAVMG AKKSEWWAVD GELHEIGEGV PHRERFAIPR DNLPNRRRKQ MREQFMRRTR LVLKDSEHET
101: WCKKYMELYQ ELRENWERLY WDEGYSKKIA EDRANYDSAE EDDLDFSPYS RRRSSSVEPN KDLGSGESKQ GETWERVTQI RDKFEYDRER RMRERAFAPM
201: NMENNFGQQN WKRPEARTNQ GFPRQT
101: WCKKYMELYQ ELRENWERLY WDEGYSKKIA EDRANYDSAE EDDLDFSPYS RRRSSSVEPN KDLGSGESKQ GETWERVTQI RDKFEYDRER RMRERAFAPM
201: NMENNFGQQN WKRPEARTNQ GFPRQT
001: MLSVARRLGS ATPSLQNGAS LLRFMRTEAS QPRRRNKFPS LSPLKKKEEK SEWWIVDGEM HEIGDHVPLR ERFTIPRDNI PNKRRKQLRE QFMRRTRLVL
101: KESEHEPWCK KYMELYNEVR ENWERLYWDE GYSKKIARDH ANYESAEEDD EDFNPYRNRR PYNDSIKQEQ GFNRTTQGDD NWEKVSQIRD KFEYD
101: KESEHEPWCK KYMELYNEVR ENWERLYWDE GYSKKIARDH ANYESAEEDD EDFNPYRNRR PYNDSIKQEQ GFNRTTQGDD NWEKVSQIRD KFEYD
Arabidopsis Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G07440.1); Has 32 Blast hits to 32 proteins in 11 spe /.../Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). [Source:TAIR;Acc:AT5G48530]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.