CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 4
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES07517
OQU90613

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G07440.1	EES07517	AT3G48150.1	21798944
AT3G07440.1	OQU90613	AT4G24840.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d016490_P001	Maize	mitochondrion	90.33	90.33
TraesCS1D01G232300.1	Wheat	mitochondrion	61.67	83.33
HORVU1Hr1G058580.1	Barley	mitochondrion	61.67	83.33
TraesCS1B01G244400.2	Wheat	mitochondrion	62.0	82.3
TraesCS1A01G229700.1	Wheat	mitochondrion	62.0	82.3
GSMUA_Achr2P06060_001	Banana	nucleus	35.0	66.04
VIT_00s2171g00010.t01	Wine grape	mitochondrion	34.0	62.96
KRH07362	Soybean	mitochondrion	38.33	61.5
Os02t0478500-01	Rice	nucleus	74.0	61.16
AT5G48530.1	Thale cress	mitochondrion	38.33	58.97
KRH66195	Soybean	mitochondrion	43.33	56.52
CDX86300	Canola	mitochondrion	44.0	56.41
Bra037481.1-P	Field mustard	mitochondrion	44.0	56.41
AT3G07440.1	Thale cress	mitochondrion	44.0	56.17
CDX85344	Canola	mitochondrion	43.67	55.98
Solyc09g058990.2.1	Tomato	mitochondrion	42.33	52.26
VIT_00s0337g00070.t01	Wine grape	mitochondrion	10.33	33.33

Protein Annotations

EnsemblPlants:EES05056	EnsemblPlantsGene:SORBI_3004G145600	EntrezGene:8084519	PANTHER:PTHR36031	ProteinID:EES05056	ProteinID:EES05056.1
RefSeq:XP_002452080.1	SEG:seg	UniParc:UPI0001A85507	UniProt:C5XRQ2	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr4:+:44929561..44935360

Molecular Weight (calculated)

35915.4 Da

IEP (calculated)

9.603

GRAVY (calculated)

-1.422

Length

300 amino acids

Sequence
(BLAST)

001: MLRCLYTQRR WAHRRGGFVT GGTGWSKPPP PGLGPAAGVG MKKSEWWAVD GEMHEIGDGV PHRERFAIPR DNLPNRRRKQ MREQFMRRTR LVLKDSEHET
101: WCKKYMELYQ ELRENWERLY WDEGYSKKIA ESHANYDSAE EDDLDFSPYS RRRQSNVEPN KDLGFGVSKQ GETWERVTQI RDKFEYDRER RMRERAFAPM
201: NMENNFARRD PRFRSQDDSS FAHTNLSDDF GLHGQTFGSR PDRSYQNESN FRNQRDSSFQ NEPNIRNQRN LNFQNKPSFR NRQYPDFQNQ GDTRSQAFDE

Best Arabidopsis Sequence Match ( AT3G07440.2 )
(BLAST)

001: MNFVVRRVGS ILPSIRHGGV SQIRLARTEA GQPRRRNKLP SLPLKKKEEK SEWWIVDGEM HEIGDHVPPR ERFTIPRDNI PNKRRKQLRD QFMRRTRLVL
101: KESEHEPWCK KYMELYNELR ENWERLYWDE GYSKKLASDH ANYESAEEDD EDFNPYRNRR SFSDQTKEQG FNRTTQGDNW EKVSQIRDKF EYDRERRMRD
201: KAFAPMNAAP ESQESRDLNW NAQRRPFDPD RFARD

Arabidopsis Description

F21O3.15 protein [Source:UniProtKB/TrEMBL;Acc:Q9SRS2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.