Factsheet for Bra037481.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra006453.1-P
Bra009783.1-P
Bra013840.1-P
Bra018081.1-P
Bra019205.1-P
Bra020466.1-P
Bra033769.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G07440.1	Bra018081.1-P	AT3G48150.1	21798944
AT3G07440.1	Bra033769.1-P	AT3G48150.1	21798944
AT3G07440.1	Bra006453.1-P	AT4G24840.1	21798944
AT3G07440.1	Bra013840.1-P	AT4G24840.1	21798944
AT3G07440.1	Bra019205.1-P	AT4G24840.1	21798944
AT3G07440.1	Bra009783.1-P	AT5G24660.1	21798944
AT3G07440.1	Bra020466.1-P	AT5G24660.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86300	Canola	mitochondrion	99.57	99.57
AT5G48530.1	Thale cress	mitochondrion	70.51	84.62
AT3G07440.1	Thale cress	mitochondrion	78.21	77.87
KRH07362	Soybean	mitochondrion	54.27	67.91
KRH66195	Soybean	mitochondrion	64.1	65.22
Solyc09g058990.2.1	Tomato	mitochondrion	62.39	60.08
GSMUA_Achr2P06060_001	Banana	nucleus	38.89	57.23
HORVU1Hr1G058580.1	Barley	mitochondrion	54.27	57.21
TraesCS1D01G232300.1	Wheat	mitochondrion	53.42	56.31
TraesCS1A01G229700.1	Wheat	mitochondrion	54.27	56.19
TraesCS1B01G244400.2	Wheat	mitochondrion	53.85	55.75
EES05056	Sorghum	mitochondrion	56.41	44.0
Zm00001d016490_P001	Maize	mitochondrion	55.56	43.33
VIT_00s0337g00070.t01	Wine grape	mitochondrion	14.53	36.56
Os02t0478500-01	Rice	nucleus	56.41	36.36

Protein Annotations

EnsemblPlants:Bra037481.1	EnsemblPlants:Bra037481.1-P	EnsemblPlantsGene:Bra037481	PANTHER:PTHR36031	SEG:seg	UniParc:UPI000253F928
UniProt:M4F8R9	MapMan:35.2	:	:	:	:

Description

AT3G07440 (E=1e-100) | unknown protein

Coordinates

chrA06:-:21251401..21252805

Molecular Weight (calculated)

28425.1 Da

IEP (calculated)

9.789

GRAVY (calculated)

-1.459

Length

234 amino acids

Sequence
(BLAST)

001: MLSVAKRLVS ASPSLRNGAP LLQFFRTEAG QPRRRTKSHS PPLKKKEEKS EWWIVDGEMH EIGDHVPLRE RFTIPRDNIP NRRRKQLREQ FMRRTRLVLK
101: ESEHEPWCKK YMELYNELRE NWERLYWDEG YSKKIARDHA NYESAEEDDE DFNPYRNRRT FNDPTKEQGF VNRTTQQGDG NWDKVNQIRD KFEYDRERRM
201: REKAFAPMNA APDARDSNWN AQRQPFDAER YTRD

Best Arabidopsis Sequence Match ( AT3G07440.2 )
(BLAST)

001: MNFVVRRVGS ILPSIRHGGV SQIRLARTEA GQPRRRNKLP SLPLKKKEEK SEWWIVDGEM HEIGDHVPPR ERFTIPRDNI PNKRRKQLRD QFMRRTRLVL
101: KESEHEPWCK KYMELYNELR ENWERLYWDE GYSKKLASDH ANYESAEEDD EDFNPYRNRR SFSDQTKEQG FNRTTQGDNW EKVSQIRDKF EYDRERRMRD
201: KAFAPMNAAP ESQESRDLNW NAQRRPFDPD RFARD

Arabidopsis Description

F21O3.15 protein [Source:UniProtKB/TrEMBL;Acc:Q9SRS2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.