Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 5
- nucleus 3
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU0Hr1G027080.4 | |
| HORVU5Hr1G121540.1 | |
| HORVU6Hr1G062870.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G07440.1 | HORVU0Hr1G027080.4 | AT3G48150.1 | 21798944 |
| AT3G07440.1 | HORVU6Hr1G062870.1 | AT3G48150.1 | 21798944 |
| AT3G07440.1 | HORVU5Hr1G121540.1 | AT4G24840.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G232300.1 | Wheat | mitochondrion | 96.85 | 96.85 |
| TraesCS1B01G244400.2 | Wheat | mitochondrion | 95.5 | 93.81 |
| TraesCS1A01G229700.1 | Wheat | mitochondrion | 95.05 | 93.36 |
| GSMUA_Achr2P06060_001 | Banana | nucleus | 45.5 | 63.52 |
| VIT_00s2171g00010.t01 | Wine grape | mitochondrion | 45.5 | 62.35 |
| EES05056 | Sorghum | mitochondrion | 83.33 | 61.67 |
| KRH07362 | Soybean | mitochondrion | 50.9 | 60.43 |
| Zm00001d016490_P001 | Maize | mitochondrion | 79.73 | 59.0 |
| AT5G48530.1 | Thale cress | mitochondrion | 50.9 | 57.95 |
| KRH66195 | Soybean | mitochondrion | 57.66 | 55.65 |
| AT3G07440.1 | Thale cress | mitochondrion | 58.56 | 55.32 |
| CDX86300 | Canola | mitochondrion | 57.21 | 54.27 |
| Bra037481.1-P | Field mustard | mitochondrion | 57.21 | 54.27 |
| CDX85344 | Canola | mitochondrion | 56.76 | 53.85 |
| Solyc09g058990.2.1 | Tomato | mitochondrion | 56.76 | 51.85 |
| Os02t0478500-01 | Rice | nucleus | 82.88 | 50.69 |
| VIT_00s0337g00070.t01 | Wine grape | mitochondrion | 14.41 | 34.41 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G058580.1 | EnsemblPlantsGene:HORVU1Hr1G058580 | PANTHER:PTHR36031 | UniParc:UPI000294A012 | UniProt:M0ZEX1 | MapMan:35.2 |
Description
No Description!
Coordinates
chrchr1H:+:427649197..427655495
Molecular Weight (calculated)
26826.3 Da
IEP (calculated)
9.834
GRAVY (calculated)
-1.382
Length
222 amino acids
Sequence
(BLAST)
(BLAST)
001: MLRCMYTQRR WAHRRGGFVT GGTGWSQKAR PAAVMGTKKS EWWAVDGELH EIGDGVPHRE RFAIPRDNLP NRRRKQMREQ FMRRTRLVLK DSEHETWCKK
101: YMELYQELRE NWERLYWDEG YSKKIAEDHA NYDSAEEDDL DFSPYSRRRS SSIEPNKDLG SGESKQGDTW ERVTQIRDKF EYDRERRMRE RAFAPMNMEN
201: NFGQQNWKRP ESRTGQVFTR QT
101: YMELYQELRE NWERLYWDEG YSKKIAEDHA NYDSAEEDDL DFSPYSRRRS SSIEPNKDLG SGESKQGDTW ERVTQIRDKF EYDRERRMRE RAFAPMNMEN
201: NFGQQNWKRP ESRTGQVFTR QT
001: MNFVVRRVGS ILPSIRHGGV SQIRLARTEA GQPRRRNKLP SLPLKKKEEK SEWWIVDGEM HEIGDHVPPR ERFTIPRDNI PNKRRKQLRD QFMRRTRLVL
101: KESEHEPWCK KYMELYNELR ENWERLYWDE GYSKKLASDH ANYESAEEDD EDFNPYRNRR SFSDQTKEQG FNRTTQGDNW EKVSQIRDKF EYDRERRMRD
201: KAFAPMNAAP ESQESRDLNW NAQRRPFDPD RFARD
101: KESEHEPWCK KYMELYNELR ENWERLYWDE GYSKKLASDH ANYESAEEDD EDFNPYRNRR SFSDQTKEQG FNRTTQGDNW EKVSQIRDKF EYDRERRMRD
201: KAFAPMNAAP ESQESRDLNW NAQRRPFDPD RFARD
Arabidopsis Description
F21O3.15 protein [Source:UniProtKB/TrEMBL;Acc:Q9SRS2]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.