Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 5
- nucleus 3
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G07440.1 | Solyc03g113740.2.1 | AT3G48150.1 | 21798944 |
| AT3G07440.1 | Solyc08g006660.1.1 | AT4G24840.1 | 21798944 |
| AT3G07440.1 | Solyc03g096760.1.1 | AT5G24660.1 | 21798944 |
| AT3G07440.1 | Solyc03g096770.1.1 | AT5G24660.1 | 21798944 |
| AT3G07440.1 | Solyc03g096780.1.1 | AT5G24660.1 | 21798944 |
| AT3G07440.1 | Solyc06g072990.1.1 | AT5G24660.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G48530.1 | Thale cress | mitochondrion | 55.56 | 69.23 |
| KRH07362 | Soybean | mitochondrion | 53.09 | 68.98 |
| AT3G07440.1 | Thale cress | mitochondrion | 61.32 | 63.4 |
| KRH66195 | Soybean | mitochondrion | 59.67 | 63.04 |
| CDX86300 | Canola | mitochondrion | 60.49 | 62.82 |
| Bra037481.1-P | Field mustard | mitochondrion | 60.08 | 62.39 |
| CDX85344 | Canola | mitochondrion | 60.08 | 62.39 |
| GSMUA_Achr2P06060_001 | Banana | nucleus | 38.27 | 58.49 |
| HORVU1Hr1G058580.1 | Barley | mitochondrion | 51.85 | 56.76 |
| TraesCS1D01G232300.1 | Wheat | mitochondrion | 51.44 | 56.31 |
| TraesCS1A01G229700.1 | Wheat | mitochondrion | 52.26 | 56.19 |
| TraesCS1B01G244400.2 | Wheat | mitochondrion | 51.85 | 55.75 |
| VIT_00s0337g00070.t01 | Wine grape | mitochondrion | 16.87 | 44.09 |
| Zm00001d016490_P001 | Maize | mitochondrion | 52.67 | 42.67 |
| EES05056 | Sorghum | mitochondrion | 52.26 | 42.33 |
| Os02t0478500-01 | Rice | nucleus | 53.5 | 35.81 |
Protein Annotations
| EnsemblPlants:Solyc09g058990.2.1 | EnsemblPlantsGene:Solyc09g058990.2 | PANTHER:PTHR36031 | SEG:seg | UniParc:UPI000276B560 | UniProt:K4CTI9 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr9:-:52757085..52764935
Molecular Weight (calculated)
28983.8 Da
IEP (calculated)
9.162
GRAVY (calculated)
-1.266
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSIARRVHS SLPSLQFIGL QFQSAHAAGS SSPHRRQRSK FSPSAMLKKV DDKSDWWVVD GEMHEIGENV PPRERFVISR QNIPNKRRKQ LREQFMRRTR
101: LVLKESEHEP WCKRYMELYK EMRENWERLY WDEGYSKKLA QDHANYDSAE DDDEDFSPYR RSRPNADQMK EQGGVTGRNR QGDNWEKVSL IRDKFEYDRE
201: RRMREKAFAP MSEANNIGMD YSTPKYQASD TRRYISDSDS DID
101: LVLKESEHEP WCKRYMELYK EMRENWERLY WDEGYSKKLA QDHANYDSAE DDDEDFSPYR RSRPNADQMK EQGGVTGRNR QGDNWEKVSL IRDKFEYDRE
201: RRMREKAFAP MSEANNIGMD YSTPKYQASD TRRYISDSDS DID
001: MNFVVRRVGS ILPSIRHGGV SQIRLARTEA GQPRRRNKLP SLPLKKKEEK SEWWIVDGEM HEIGDHVPPR ERFTIPRDNI PNKRRKQLRD QFMRRTRLVL
101: KESEHEPWCK KYMELYNELR ENWERLYWDE GYSKKLASDH ANYESAEEDD EDFNPYRNRR SFSDQTKEQG FNRTTQGDNW EKVSQIRDKF EYDRERRMRD
201: KAFAPMNAAP ESQESRDLNW NAQRRPFDPD RFARD
101: KESEHEPWCK KYMELYNELR ENWERLYWDE GYSKKLASDH ANYESAEEDD EDFNPYRNRR SFSDQTKEQG FNRTTQGDNW EKVSQIRDKF EYDRERRMRD
201: KAFAPMNAAP ESQESRDLNW NAQRRPFDPD RFARD
Arabidopsis Description
F21O3.15 protein [Source:UniProtKB/TrEMBL;Acc:Q9SRS2]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.