Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| EER91098 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G34720.1 | EER91098 | AT4G19700.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU0Hr1G010230.1 | Barley | nucleus | 59.15 | 79.25 |
| Os12t0613000-01 | Rice | nucleus | 79.81 | 78.34 |
| TraesCS5A01G043300.2 | Wheat | nucleus | 72.3 | 73.33 |
| TraesCS5D01G052200.2 | Wheat | nucleus | 71.83 | 72.51 |
| HORVU5Hr1G010600.10 | Barley | nucleus | 72.3 | 71.96 |
| TraesCS5B01G047100.2 | Wheat | nucleus | 69.48 | 71.5 |
| Zm00001d041491_P001 | Maize | nucleus | 92.02 | 67.82 |
| VIT_10s0003g04650.t01 | Wine grape | nucleus | 44.13 | 45.19 |
| PGSC0003DMT400054416 | Potato | nucleus | 44.13 | 44.76 |
| Solyc02g069860.2.1 | Tomato | nucleus | 43.66 | 44.71 |
| PGSC0003DMT400030813 | Potato | nucleus | 41.78 | 44.06 |
| KRH42997 | Soybean | nucleus | 41.31 | 42.72 |
| CDY02298 | Canola | nucleus | 36.62 | 42.62 |
| Bra032395.1-P | Field mustard | nucleus | 36.62 | 42.62 |
| KRH11777 | Soybean | nucleus | 40.85 | 42.44 |
| CDY09571 | Canola | nucleus | 36.15 | 42.08 |
| GSMUA_Achr4P31650_001 | Banana | nucleus | 44.13 | 41.23 |
| GSMUA_Achr7P01070_001 | Banana | nucleus | 45.07 | 41.03 |
| KRH59113 | Soybean | nucleus | 40.85 | 40.09 |
| AT1G30500.2 | Thale cress | nucleus | 35.68 | 40.0 |
| GSMUA_Achr9P10300_001 | Banana | nucleus | 42.25 | 38.46 |
| AT2G34720.1 | Thale cress | nucleus | 35.68 | 38.38 |
| CDX84285 | Canola | nucleus | 35.21 | 38.27 |
| CDY31636 | Canola | nucleus | 35.21 | 38.07 |
| Bra005397.1-P | Field mustard | nucleus | 35.21 | 38.07 |
| KRH36784 | Soybean | nucleus | 38.97 | 37.9 |
| EER92762 | Sorghum | nucleus | 38.03 | 32.66 |
| KXG37797 | Sorghum | nucleus | 36.15 | 28.84 |
| EER94699 | Sorghum | nucleus | 34.27 | 23.62 |
| OQU85816 | Sorghum | nucleus | 30.52 | 21.38 |
| EER99688 | Sorghum | nucleus | 29.58 | 20.93 |
| KXG37939 | Sorghum | nucleus | 27.7 | 17.1 |
| OQU88458 | Sorghum | nucleus | 25.35 | 16.72 |
| OQU79642 | Sorghum | plastid | 28.17 | 14.32 |
Protein Annotations
| MapMan:15.5.51.1 | EntrezGene:8070158 | UniProt:C5YRY5 | InterPro:CCAAT-binding_factor_CS | EnsemblPlants:EES17387 | ProteinID:EES17387 |
| ProteinID:EES17387.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016602 | InterPro:IPR001289 |
| InterPro:NFYA | PFAM:PF02045 | PRINTS:PR00616 | ScanProsite:PS00686 | PFscan:PS51152 | PANTHER:PTHR12632 |
| PANTHER:PTHR12632:SF18 | SMART:SM00521 | EnsemblPlantsGene:SORBI_3008G168300 | unigene:Sbi.3363 | UniParc:UPI0001A8823B | RefSeq:XP_002443549.1 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:-:60228019..60232876
Molecular Weight (calculated)
23174.6 Da
IEP (calculated)
8.697
GRAVY (calculated)
-1.087
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSVVQSVSG DHRAEDQHHQ KKQAEPGDQQ EAPVTSSDSQ PTVGTPSTDY VAPYAPHDMS HAMGQYAYPN IDPYYGSLYA AYGGQPLMHP PLVGMHPAGL
101: PLPTDAIEEP VYVNAKQYNA ILRRRQSRAK AESERKLVKG RKPYLHESRH QHALKRARGA GGRFLNSKSD DKEENSDSSH KEKQNGVAPN NGQPSTPPSP
201: NGASSANQAG SRE
101: PLPTDAIEEP VYVNAKQYNA ILRRRQSRAK AESERKLVKG RKPYLHESRH QHALKRARGA GGRFLNSKSD DKEENSDSSH KEKQNGVAPN NGQPSTPPSP
201: NGASSANQAG SRE
001: MTSSIHELSD NIGSHEKQEQ RDSHFQPPIP SARNYESIVT SLVYSDPGTT NSMAPGQYPY PDPYYRSIFA PPPQPYTGVH LQLMGVQQQG VPLPSDAVEE
101: PVFVNAKQYH GILRRRQSRA RLESQNKVIK SRKPYLHESR HLHAIRRPRG CGGRFLNAKK EDEHHEDSSH EEKSNLSAGK SAMAASSGTS
101: PVFVNAKQYH GILRRRQSRA RLESQNKVIK SRKPYLHESR HLHAIRRPRG CGGRFLNAKK EDEHHEDSSH EEKSNLSAGK SAMAASSGTS
Arabidopsis Description
NFYA7Nuclear transcription factor Y subunit A-7 [Source:UniProtKB/Swiss-Prot;Acc:Q84JP1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.