Factsheet for Bra032395.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	mitochondrion
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02298	Canola	nucleus	99.45	99.45
CDY09571	Canola	nucleus	98.36	98.36
AT1G30500.2	Thale cress	nucleus	78.69	75.79
Bra005397.1-P	Field mustard	nucleus	64.48	59.9
VIT_10s0003g04650.t01	Wine grape	nucleus	62.84	55.29
KRH42997	Soybean	nucleus	57.92	51.46
PGSC0003DMT400030813	Potato	nucleus	54.64	49.51
KRH11777	Soybean	nucleus	55.19	49.27
Solyc02g069860.2.1	Tomato	nucleus	54.64	48.08
PGSC0003DMT400054416	Potato	nucleus	54.1	47.14
KRH36784	Soybean	nucleus	56.28	47.03
KRH59113	Soybean	nucleus	54.1	45.62
HORVU0Hr1G010230.1	Barley	nucleus	35.52	40.88
GSMUA_Achr7P01070_001	Banana	nucleus	50.27	39.32
GSMUA_Achr4P31650_001	Banana	nucleus	48.63	39.04
Os08t0196700-01	Rice	nucleus	39.89	37.82
EES17387	Sorghum	nucleus	42.62	36.62
TraesCS5A01G043300.2	Wheat	nucleus	39.89	34.76
TraesCS5D01G052200.2	Wheat	nucleus	39.89	34.6
HORVU5Hr1G010600.10	Barley	nucleus	40.44	34.58
Os12t0613000-01	Rice	nucleus	40.44	34.1
TraesCS5B01G047100.2	Wheat	nucleus	38.25	33.82
GSMUA_Achr9P10300_001	Banana	nucleus	43.17	33.76
Bra023913.1-P	Field mustard	nucleus	27.32	27.78
Bra014368.1-P	Field mustard	nucleus	32.79	25.97
Zm00001d041491_P001	Maize	nucleus	39.89	25.26
Bra030996.1-P	Field mustard	mitochondrion	28.42	24.64
Bra037968.1-P	Field mustard	nucleus	33.88	24.31
Bra006165.1-P	Field mustard	nucleus	33.33	24.02
Bra030899.1-P	Field mustard	nucleus	32.79	23.9
Bra023378.1-P	Field mustard	nucleus	31.15	23.75
Bra008052.1-P	Field mustard	nucleus	36.61	23.02
Bra008878.1-P	Field mustard	nucleus	33.88	21.91
Bra016031.1-P	Field mustard	nucleus	36.07	20.5
Bra031242.1-P	Field mustard	nucleus	32.79	20.34
Bra001164.1-P	Field mustard	nucleus	30.6	19.93
Bra021527.1-P	Field mustard	nucleus	32.79	19.48
Bra040529.1-P	Field mustard	nucleus	29.51	19.22
Bra009200.1-P	Field mustard	nucleus	27.87	19.1
Bra001806.1-P	Field mustard	nucleus	31.15	18.51

Protein Annotations

MapMan:15.5.51.1	EnsemblPlantsGene:Bra032395	EnsemblPlants:Bra032395.1	EnsemblPlants:Bra032395.1-P	InterPro:CCAAT-binding_factor_CS	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016602	GO:GO:0045892	InterPro:IPR001289	UniProt:M4EUB3
InterPro:NFYA	PFAM:PF02045	PRINTS:PR00616	ScanProsite:PS00686	PFscan:PS51152	PANTHER:PTHR12632
PANTHER:PTHR12632:SF29	SMART:SM00521	UniParc:UPI0002542557	SEG:seg	:	:

Description

AT1G30500 (E=2e-064) NF-YA7 | NF-YA7 (NUCLEAR FACTOR Y, SUBUNIT A7); specific transcriptional repressor/ transcription factor

Coordinates

chrA09:+:21760151..21761497

Molecular Weight (calculated)

20783.4 Da

IEP (calculated)

9.272

GRAVY (calculated)

-1.019

Length

183 amino acids

Sequence
(BLAST)

001: MASSVHDLSD KIETHDKQEH KDSQFQIQPP IPPGRNSAVY SEQLPHSMAP GHYPYPDPYY RSIFAPNPQA YPPRPYETGV HAHLMGVQQQ CVPLPSDAVE
101: EPVFVNAKQY HGILRRRQSR AKLESQNKVV KSRKPYLHES RHLHAIRRPR GCGGRFLNAK KEEEHHEGNH LEEKSMAASG GTS

Best Arabidopsis Sequence Match ( AT1G30500.2 )
(BLAST)

001: MTSSIHELSD NIGSHEKQEQ RDSHFQPPIP SARNYESIVT SLVYSDPGTT NSMAPGQYPY PDPYYRSIFA PPPQPYTGVH LQLMGVQQQG VPLPSDAVEE
101: PVFVNAKQYH GILRRRQSRA RLESQNKVIK SRKPYLHESR HLHAIRRPRG CGGRFLNAKK EDEHHEDSSH EEKSNLSAGK SAMAASSGTS

Arabidopsis Description

NFYA7Nuclear transcription factor Y subunit A-7 [Source:UniProtKB/Swiss-Prot;Acc:Q84JP1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.