Factsheet for Bra037968.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51397	Canola	nucleus	98.43	88.07
CDY33084	Canola	nucleus	95.29	81.27
Bra014368.1-P	Field mustard	nucleus	66.67	73.59
Bra030899.1-P	Field mustard	nucleus	67.45	68.53
AT1G54160.1	Thale cress	nucleus	80.0	66.23
Zm00001d029489_P002	Maize	nucleus	21.18	60.0
Bra021527.1-P	Field mustard	nucleus	49.8	41.23
Bra008052.1-P	Field mustard	nucleus	41.18	36.08
Os03t0174900-01	Rice	vacuole	29.41	35.89
TraesCS4B01G290400.1	Wheat	nucleus	33.73	35.25
TraesCS4D01G289600.1	Wheat	nucleus	33.33	35.12
EER92762	Sorghum	nucleus	33.73	34.68
Bra032395.1-P	Field mustard	nucleus	24.31	33.88
GSMUA_Achr2P21730_001	Banana	nucleus	36.86	32.3
GSMUA_Achr8P16700_001	Banana	nucleus	36.47	32.29
Bra016031.1-P	Field mustard	nucleus	40.39	31.99
Os07t0608200-01	Rice	nucleus	37.65	31.58
Bra005397.1-P	Field mustard	nucleus	24.31	31.47
KRH47551	Soybean	nucleus	42.75	31.32
PGSC0003DMT400006358	Potato	nucleus	34.51	31.1
HORVU2Hr1G032130.4	Barley	nucleus	36.47	31.0
Bra030996.1-P	Field mustard	mitochondrion	25.49	30.81
EER99688	Sorghum	nucleus	36.08	30.56
Bra023913.1-P	Field mustard	nucleus	21.57	30.56
KRH06120	Soybean	nucleus	37.65	30.09
TraesCS2B01G198700.1	Wheat	nucleus	35.29	30.0
Zm00001d022109_P003	Maize	nucleus	35.29	29.9
TraesCS2A01G172500.1	Wheat	nucleus	35.29	29.7
HORVU4Hr1G075830.4	Barley	nucleus	33.73	29.66
Os02t0776400-01	Rice	nucleus	31.37	29.63
GSMUA_AchrUn_...	Banana	nucleus	36.08	29.49
Solyc03g121940.2.1	Tomato	nucleus	27.84	29.46
Zm00001d006835_P002	Maize	nucleus	34.51	29.33
TraesCS6D01G315300.1	Wheat	nucleus	29.02	29.13
TraesCS6B01G366100.2	Wheat	nucleus	29.02	29.02
Os03t0411100-01	Rice	nucleus	35.69	28.71
EER94699	Sorghum	nucleus	34.51	28.48
TraesCS6A01G335400.1	Wheat	nucleus	28.24	28.35
KRH10071	Soybean	nucleus	32.94	28.28
GSMUA_Achr8P30700_001	Banana	nucleus	34.51	27.76
Zm00001d018255_P001	Maize	endoplasmic reticulum, extracellular, golgi	31.76	27.65
OQU85816	Sorghum	nucleus	32.55	27.3
TraesCS2D01G179600.2	Wheat	nucleus	35.69	27.16
HORVU6Hr1G081080.12	Barley	nucleus	29.41	26.69
Bra023378.1-P	Field mustard	nucleus	25.1	26.67
Bra006165.1-P	Field mustard	nucleus	26.27	26.38
Zm00001d027874_P004	Maize	nucleus	27.06	26.24
Bra008878.1-P	Field mustard	nucleus	27.06	24.38
Bra031242.1-P	Field mustard	nucleus	27.84	24.07
Bra040529.1-P	Field mustard	nucleus	25.49	23.13
Bra001164.1-P	Field mustard	nucleus	25.1	22.78
Bra009200.1-P	Field mustard	nucleus	23.53	22.47
Bra001806.1-P	Field mustard	nucleus	27.06	22.4
Zm00001d026305_P002	Maize	nucleus	24.71	13.94

Protein Annotations

MapMan:15.5.51.1	EnsemblPlantsGene:Bra037968	EnsemblPlants:Bra037968.1	EnsemblPlants:Bra037968.1-P	InterPro:CCAAT-binding_factor_CS	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016602	InterPro:IPR001289	UniProt:M4FA54	InterPro:NFYA
PFAM:PF02045	PRINTS:PR00616	ScanProsite:PS00686	PFscan:PS51152	PANTHER:PTHR12632	PANTHER:PTHR12632:SF8
SMART:SM00521	UniParc:UPI000253E708	SEG:seg	:	:	:

Description

AT1G54160 (E=2e-072) NFYA5, NF-YA5 | NF-YA5 (NUCLEAR FACTOR Y, SUBUNIT A5); specific transcriptional repressor/ transcription factor

Coordinates

chrA06:+:371689..372715

Molecular Weight (calculated)

28007.9 Da

IEP (calculated)

9.917

GRAVY (calculated)

-0.725

Length

255 amino acids

Sequence
(BLAST)

001: MMMMSTTQLP SSMKHSSLQL QNQDSSSTQS TGESGGGEAA SFGEPNRYGC NSIVANTNLS GYNKSTTTSS MVSQEPVFPP TCGPPSWPLQ CAETSHFNGF
101: LAPEYASQPT ALTHLEMMGL VTSRVPLPNN IQENEPIFVN AKQYHAILRR RKHRAKLEAQ NKLIKSRKPY LHESRHLHAL KRARGSGGRF LNTKKLQESS
201: NSPLCSSQMA NGEGYSKSST TPSSSSDRNN MFQNTPFRFS GYPSTHHVSA LMSET

Best Arabidopsis Sequence Match ( AT1G54160.1 )
(BLAST)

001: MQVFQRKEDS SWGNSMPTTN SNIQGSESFS LTKDMIMSTT QLPAMKHSGL QLQNQDSTSS QSTEEESGGG EVASFGEYKR YGCSIVNNNL SGYIENLGKP
101: IENYTKSITT SSMVSQDSVF PAPTSGQISW SLQCAETSHF NGFLAPEYAS TPTALPHLEM MGLVSSRVPL PHHIQENEPI FVNAKQYHAI LRRRKHRAKL
201: EAQNKLIKCR KPYLHESRHL HALKRARGSG GRFLNTKKLQ ESSNSLCSSQ MANGQNFSMS PHGGGSGIGS SSISPSSNSN CINMFQNPQF RFSGYPSTHH
301: ASALMSGT

Arabidopsis Description

NFYA5Nuclear transcription factor Y subunit A-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYH4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.