Factsheet for Os03t0174900-01

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
nucleus 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G289600.1	Wheat	nucleus	70.81	61.16
EER92762	Sorghum	nucleus	72.25	60.89
TraesCS4B01G290400.1	Wheat	nucleus	70.81	60.66
HORVU4Hr1G075830.4	Barley	nucleus	71.29	51.38
Zm00001d027874_P004	Maize	nucleus	58.37	46.39
GSMUA_Achr8P16700_001	Banana	nucleus	53.11	38.54
Os07t0608200-01	Rice	nucleus	51.67	35.53
Os02t0776400-01	Rice	nucleus	45.45	35.19
KRH37469	Soybean	nucleus	38.28	35.09
KRH19255	Soybean	nucleus	38.76	34.76
KRH02649	Soybean	nucleus	35.41	34.74
KRH12475	Soybean	nucleus	37.8	34.65
Os12t0613000-01	Rice	nucleus	35.89	34.56
GSMUA_Achr2P21730_001	Banana	nucleus	46.89	33.68
GSMUA_AchrUn_...	Banana	nucleus	49.76	33.33
Os08t0196700-01	Rice	nucleus	30.62	33.16
GSMUA_Achr8P30700_001	Banana	nucleus	49.28	32.49
PGSC0003DMT400055982	Potato	nucleus	33.49	32.41
Os03t0411100-01	Rice	nucleus	48.33	31.86
Os03t0696300-01	Rice	nucleus	37.8	30.38
CDY56623	Canola	nucleus	33.49	29.91
CDY02477	Canola	nucleus	32.54	29.82
CDY69800	Canola	nucleus	32.54	29.44
Bra037968.1-P	Field mustard	nucleus	35.89	29.41
CDY26138	Canola	nucleus	33.01	29.36
Bra014368.1-P	Field mustard	nucleus	32.06	29.0
Bra030996.1-P	Field mustard	mitochondrion	29.19	28.91
Os10t0397900-00	Rice	nucleus	22.49	28.31
Bra030899.1-P	Field mustard	nucleus	33.01	27.49
CDY48025	Canola	nucleus	37.8	27.15
Bra008052.1-P	Field mustard	nucleus	37.8	27.15
CDY51397	Canola	nucleus	35.89	26.32
Solyc08g062210.2.1	Tomato	nucleus	40.67	26.15
CDX72947	Canola	nucleus, plasma membrane, plastid	29.67	25.83
CDX82133	Canola	nucleus	39.23	25.71
KRH10071	Soybean	nucleus	36.36	25.59
Bra016031.1-P	Field mustard	nucleus	38.76	25.16
CDX96435	Canola	nucleus	38.76	25.16
AT1G54160.1	Thale cress	nucleus	36.84	25.0
CDY33084	Canola	nucleus	35.41	24.75
KRH06120	Soybean	nucleus	36.84	24.14
Bra021527.1-P	Field mustard	nucleus	35.41	24.03
CDY39091	Canola	nucleus	35.41	24.03
AT3G14020.1	Thale cress	nucleus	34.93	23.7
CDY33253	Canola	nucleus	34.45	23.38
AT1G17590.3	Thale cress	nucleus	36.36	23.17
AT1G72830.2	Thale cress	nucleus	37.8	23.17
CDX72950	Canola	nucleus	37.8	23.03
KRH47551	Soybean	nucleus	38.28	22.99
CDY21741	Canola	nucleus	34.93	22.67
VIT_11s0016g01480.t01	Wine grape	endoplasmic reticulum, golgi	42.58	22.08
Os12t0618600-01	Rice	nucleus	32.54	21.86
VIT_09s0002g01590.t01	Wine grape	nucleus	33.97	21.13
CDY70458	Canola	nucleus	40.67	20.99
Os03t0647600-01	Rice	nucleus	32.54	19.21
CDY30854	Canola	nucleus	12.44	17.81
CDX81837	Canola	nucleus	23.45	16.44
Os07t0158500-00	Rice	nucleus	26.32	14.51

Protein Annotations

MapMan:15.5.51.1	EMBL:AB288029	ProteinID:ABF94256.1	EMBL:AK069348	ProteinID:BAS82569.1	InterPro:CCAAT-binding_factor_CS
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016602	InterPro:IPR001289	InterPro:NFYA
EnsemblPlantsGene:Os03g0174900	EnsemblPlants:Os03t0174900-01	PFAM:PF02045	PRINTS:PR00616	ScanProsite:PS00686	PFscan:PS51152
PANTHER:PTHR12632	PANTHER:PTHR12632:SF16	UniProt:Q10R12	SMART:SM00521	SignalP:SignalP-noTM	UniParc:UPI0000DB4C5D
SEG:seg	:	:	:	:	:

Description

HAP2 SUBUNIT OF CCAAT-BOX BINDING COMPLEXSimilar to RAPB protein. (Os03t0174900-01)

Coordinates

chr3:-:4002089..4005420

Molecular Weight (calculated)

23163.7 Da

IEP (calculated)

10.030

GRAVY (calculated)

-0.486

Length

209 amino acids

Sequence
(BLAST)

001: MQSLFASTLL KLCDISFLLV LMLGNLDGYT KSDEGKMMSA LSLGKSETVY AHSEPDRSQP FGISYPYADS FYGGAVATYG THAIMHPQIV GVMSSSRVPL
101: PIEPATEEPI YVNAKQYHAI LRRRQLRAKL EAENKLVKNR KPYLHESRHQ HAMKRARGTG GRFLNTKQQP EASDGGTPRL VSANGVVFSK HEHSLSSSDL
201: HHRRAKEGA

Best Arabidopsis Sequence Match ( AT1G17590.3 )
(BLAST)

001: MDKKVSFTSS VAHSTPPYLS TSISWGLPTK SNGVTESLSL KVVDARPERL INTKNISFQD QDSSSTLSSA QSSNDVTSSG DDNPSRQISF LAHSDVCKGF
101: EETQRKRFAI KSGSSTAGIA DIHSSPSKAN FSFHYADPHF GGLMPAAYLP QATIWNPQMT RVPLPFDLIE NEPVFVNAKQ FHAIMRRRQQ RAKLEAQNKL
201: IKARKPYLHE SRHVHALKRP RGSGGRFLNT KKLQESTDPK QDMPIQQQHA TGNMSRFVLY QLQNSNDCDC STTSRSDITS ASDSVNLFGH SEFLISDCPS
301: QTNPTMYVHG QSNDMHGGRN THHFSVHI

Arabidopsis Description

NFYA8Uncharacterized protein At1g17590 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUW0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.