Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21741 | Canola | nucleus | 80.2 | 74.22 |
| AT1G17590.3 | Thale cress | nucleus | 65.77 | 59.76 |
| CDX82133 | Canola | nucleus | 57.05 | 53.29 |
| CDX96435 | Canola | nucleus | 55.03 | 50.93 |
| CDY48025 | Canola | nucleus | 48.99 | 50.17 |
| Bra030996.1-P | Field mustard | mitochondrion | 33.56 | 47.39 |
| CDX72950 | Canola | nucleus | 53.36 | 46.36 |
| CDY70458 | Canola | nucleus | 54.36 | 40.0 |
| Zm00001d029489_P002 | Maize | nucleus | 10.74 | 35.56 |
| CDY69800 | Canola | nucleus | 23.83 | 30.74 |
| KRH47551 | Soybean | nucleus | 34.9 | 29.89 |
| CDY02477 | Canola | nucleus | 22.82 | 29.82 |
| CDY26138 | Canola | nucleus | 23.15 | 29.36 |
| CDY56623 | Canola | nucleus | 22.82 | 29.06 |
| KRH06120 | Soybean | nucleus | 30.54 | 28.53 |
| KRH10071 | Soybean | nucleus | 27.85 | 27.95 |
| CDY51397 | Canola | nucleus | 25.84 | 27.02 |
| CDY33084 | Canola | nucleus | 26.51 | 26.42 |
| GSMUA_Achr2P21730_001 | Banana | nucleus | 24.83 | 25.43 |
| Os07t0608200-01 | Rice | nucleus | 25.5 | 25.0 |
| CDY33253 | Canola | nucleus | 25.5 | 24.68 |
| CDX72947 | Canola | nucleus, plasma membrane, plastid | 19.8 | 24.58 |
| CDY39091 | Canola | nucleus | 25.17 | 24.35 |
| HORVU2Hr1G032130.4 | Barley | nucleus | 24.16 | 24.0 |
| EER92762 | Sorghum | nucleus | 19.8 | 23.79 |
| VIT_09s0002g01590.t01 | Wine grape | nucleus | 26.51 | 23.51 |
| Os03t0174900-01 | Rice | vacuole | 16.44 | 23.45 |
| GSMUA_Achr8P16700_001 | Banana | nucleus | 22.48 | 23.26 |
| TraesCS2B01G198700.1 | Wheat | nucleus | 22.82 | 22.67 |
| EER94699 | Sorghum | nucleus | 23.49 | 22.65 |
| EER99688 | Sorghum | nucleus | 22.82 | 22.59 |
| TraesCS4B01G290400.1 | Wheat | nucleus | 18.46 | 22.54 |
| GSMUA_AchrUn_... | Banana | nucleus | 23.49 | 22.44 |
| TraesCS4D01G289600.1 | Wheat | nucleus | 18.12 | 22.31 |
| TraesCS2A01G172500.1 | Wheat | nucleus | 22.48 | 22.11 |
| GSMUA_Achr8P30700_001 | Banana | nucleus | 23.15 | 21.77 |
| CDY02298 | Canola | nucleus | 13.09 | 21.31 |
| PGSC0003DMT400006358 | Potato | nucleus | 20.13 | 21.2 |
| TraesCS2D01G179600.2 | Wheat | nucleus | 23.83 | 21.19 |
| Zm00001d022109_P003 | Maize | nucleus | 21.14 | 20.93 |
| CDY09571 | Canola | nucleus | 12.75 | 20.77 |
| Os03t0411100-01 | Rice | nucleus | 21.81 | 20.5 |
| Zm00001d027874_P004 | Maize | nucleus | 17.79 | 20.15 |
| HORVU4Hr1G075830.4 | Barley | nucleus | 19.46 | 20.0 |
| Zm00001d006835_P002 | Maize | nucleus | 20.13 | 20.0 |
| Solyc03g121940.2.1 | Tomato | nucleus | 15.44 | 19.09 |
| CDY05192 | Canola | nucleus | 11.41 | 18.99 |
| CDX78492 | Canola | nucleus | 12.75 | 18.54 |
| Os02t0776400-01 | Rice | nucleus | 16.44 | 18.15 |
| TraesCS6A01G335400.1 | Wheat | nucleus | 15.1 | 17.72 |
| TraesCS6D01G315300.1 | Wheat | nucleus | 15.1 | 17.72 |
| TraesCS6B01G366100.2 | Wheat | nucleus | 15.1 | 17.65 |
| OQU85816 | Sorghum | nucleus | 17.79 | 17.43 |
| CDX84285 | Canola | nucleus | 11.41 | 17.35 |
| CDY31636 | Canola | nucleus | 11.41 | 17.26 |
| CDY37330 | Canola | nucleus | 10.4 | 17.22 |
| CDY18809 | Canola | nucleus | 15.77 | 17.15 |
| CDX82223 | Canola | nucleus | 16.11 | 17.14 |
| CDY32398 | Canola | nucleus | 16.78 | 16.78 |
| CDY06393 | Canola | nucleus | 16.78 | 16.78 |
| CDX74133 | Canola | nucleus | 15.77 | 16.73 |
| CDY14662 | Canola | nucleus | 15.77 | 16.73 |
| Zm00001d018255_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 16.44 | 16.72 |
| HORVU6Hr1G081080.12 | Barley | nucleus | 15.44 | 16.37 |
| CDY19591 | Canola | nucleus | 15.77 | 15.99 |
| CDX85686 | Canola | nucleus | 12.42 | 15.68 |
| CDX91161 | Canola | nucleus | 11.41 | 15.53 |
| CDY53967 | Canola | nucleus | 14.43 | 15.14 |
| CDX97206 | Canola | nucleus | 14.43 | 15.09 |
| CDX70480 | Canola | nucleus | 13.09 | 15.06 |
| CDX98930 | Canola | nucleus | 13.42 | 14.98 |
| CDX70098 | Canola | nucleus | 13.42 | 14.98 |
| CDY30854 | Canola | nucleus | 6.38 | 13.01 |
| Zm00001d026305_P002 | Maize | nucleus | 18.79 | 12.39 |
Protein Annotations
| EnsemblPlants:CDX81837 | EnsemblPlantsGene:GSBRNA2T00136782001 | GO:A0A078CYD1 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001289 |
| InterPro:NFYA | PANTHER:PTHR12632 | PANTHER:PTHR12632:SF8 | PFAM:PF02045 | PFscan:PS51152 | ProteinID:CDX81837 |
| ProteinID:CDX81837.1 | SEG:seg | UniParc:UPI0004EE3ADC | MapMan:15.5.51.1 | : | : |
Description
BnaC08g37640D
Coordinates
chrLK031826:-:1052319..1054292
Molecular Weight (calculated)
33098.4 Da
IEP (calculated)
6.571
GRAVY (calculated)
-0.679
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKKDSFTTA HSTPPYLNTS ISWGLPTESN VQSYDVTESL SLKVHARSKH VLNPTKIDFQ DKDSSSTQST DQSSTEVATS GDDDDDDNPS RQISFSAKPD
101: SFEKTQRKGF PNNIKSGSSY TTGTSDIHFA PGKSNFSCFG GYLPHATVWN PKMVGRVPLP LDFIDNEPVF VNVKQFHAIM RKEQRAKLET QNKLIKARKV
201: YHIFMNLDMF TLLNDLEDLK DTMGNMSGFV AHQLHASNDL GCSTTSGSDI TSVSDGVRRC EFQLSDCPSQ TKPTMYIHGQ SNDMHGGGRN TDHFSVHI
101: SFEKTQRKGF PNNIKSGSSY TTGTSDIHFA PGKSNFSCFG GYLPHATVWN PKMVGRVPLP LDFIDNEPVF VNVKQFHAIM RKEQRAKLET QNKLIKARKV
201: YHIFMNLDMF TLLNDLEDLK DTMGNMSGFV AHQLHASNDL GCSTTSGSDI TSVSDGVRRC EFQLSDCPSQ TKPTMYIHGQ SNDMHGGGRN TDHFSVHI
001: MDKKVSFTSS VAHSTPPYLS TSISWGLPTK SNGVTESLSL KVVDARPERL INTKNISFQD QDSSSTLSSA QSSNDVTSSG DDNPSRQISF LAHSDVCKGF
101: EETQRKRFAI KSGSSTAGIA DIHSSPSKAN FSFHYADPHF GGLMPAAYLP QATIWNPQMT RVPLPFDLIE NEPVFVNAKQ FHAIMRRRQQ RAKLEAQNKL
201: IKARKPYLHE SRHVHALKRP RGSGGRFLNT KKLQESTDPK QDMPIQQQHA TGNMSRFVLY QLQNSNDCDC STTSRSDITS ASDSVNLFGH SEFLISDCPS
301: QTNPTMYVHG QSNDMHGGRN THHFSVHI
101: EETQRKRFAI KSGSSTAGIA DIHSSPSKAN FSFHYADPHF GGLMPAAYLP QATIWNPQMT RVPLPFDLIE NEPVFVNAKQ FHAIMRRRQQ RAKLEAQNKL
201: IKARKPYLHE SRHVHALKRP RGSGGRFLNT KKLQESTDPK QDMPIQQQHA TGNMSRFVLY QLQNSNDCDC STTSRSDITS ASDSVNLFGH SEFLISDCPS
301: QTNPTMYVHG QSNDMHGGRN THHFSVHI
Arabidopsis Description
NFYA8Uncharacterized protein At1g17590 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUW0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.