Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G032130.4 | Barley | nucleus | 65.13 | 66.0 |
| TraesCS2B01G198700.1 | Wheat | nucleus | 64.8 | 65.67 |
| TraesCS2A01G172500.1 | Wheat | nucleus | 64.8 | 65.02 |
| Zm00001d006835_P002 | Maize | nucleus | 59.21 | 60.0 |
| EER99688 | Sorghum | nucleus | 59.21 | 59.8 |
| Zm00001d022109_P003 | Maize | nucleus | 58.55 | 59.14 |
| TraesCS2D01G179600.2 | Wheat | nucleus | 62.83 | 57.01 |
| Os03t0411100-01 | Rice | nucleus | 56.25 | 53.94 |
| Os03t0174900-01 | Rice | vacuole | 35.53 | 51.67 |
| GSMUA_Achr8P16700_001 | Banana | nucleus | 48.03 | 50.69 |
| GSMUA_Achr2P21730_001 | Banana | nucleus | 45.39 | 47.42 |
| GSMUA_Achr8P30700_001 | Banana | nucleus | 46.38 | 44.48 |
| GSMUA_AchrUn_... | Banana | nucleus | 42.76 | 41.67 |
| CDY69800 | Canola | nucleus | 30.92 | 40.69 |
| Bra014368.1-P | Field mustard | nucleus | 30.59 | 40.26 |
| CDY26138 | Canola | nucleus | 30.92 | 40.0 |
| Os02t0776400-01 | Rice | nucleus | 34.87 | 39.26 |
| CDY48025 | Canola | nucleus | 36.18 | 37.8 |
| CDY02477 | Canola | nucleus | 28.29 | 37.72 |
| Bra037968.1-P | Field mustard | nucleus | 31.58 | 37.65 |
| KRH02649 | Soybean | nucleus | 26.32 | 37.56 |
| Bra008052.1-P | Field mustard | nucleus | 35.86 | 37.46 |
| PGSC0003DMT400055982 | Potato | nucleus | 26.32 | 37.04 |
| KRH19255 | Soybean | nucleus | 28.29 | 36.91 |
| KRH37469 | Soybean | nucleus | 27.63 | 36.84 |
| KRH12475 | Soybean | nucleus | 27.3 | 36.4 |
| CDY56623 | Canola | nucleus | 27.63 | 35.9 |
| Bra030899.1-P | Field mustard | nucleus | 29.61 | 35.86 |
| CDX96435 | Canola | nucleus | 37.5 | 35.4 |
| Bra016031.1-P | Field mustard | nucleus | 37.17 | 35.09 |
| CDX82133 | Canola | nucleus | 36.51 | 34.8 |
| CDY51397 | Canola | nucleus | 32.24 | 34.39 |
| Os08t0196700-01 | Rice | nucleus | 21.38 | 33.68 |
| AT1G72830.2 | Thale cress | nucleus | 37.17 | 33.14 |
| CDX72950 | Canola | nucleus | 37.17 | 32.94 |
| CDY33084 | Canola | nucleus | 32.24 | 32.78 |
| AT1G54160.1 | Thale cress | nucleus | 32.89 | 32.47 |
| AT1G17590.3 | Thale cress | nucleus | 34.87 | 32.32 |
| Solyc08g062210.2.1 | Tomato | nucleus | 34.54 | 32.31 |
| Bra030996.1-P | Field mustard | mitochondrion | 22.37 | 32.23 |
| AT3G14020.1 | Thale cress | nucleus | 32.24 | 31.82 |
| Os12t0613000-01 | Rice | nucleus | 22.7 | 31.8 |
| Zm00001d026305_P002 | Maize | nucleus | 47.04 | 31.64 |
| CDY21741 | Canola | nucleus | 33.22 | 31.37 |
| Os10t0397900-00 | Rice | nucleus | 17.11 | 31.33 |
| Bra021527.1-P | Field mustard | nucleus | 31.25 | 30.84 |
| CDY39091 | Canola | nucleus | 31.25 | 30.84 |
| KRH10071 | Soybean | nucleus | 29.93 | 30.64 |
| Os03t0696300-01 | Rice | nucleus | 25.99 | 30.38 |
| CDY33253 | Canola | nucleus | 30.59 | 30.19 |
| CDX72947 | Canola | nucleus, plasma membrane, plastid | 23.68 | 30.0 |
| KRH47551 | Soybean | nucleus | 34.21 | 29.89 |
| VIT_11s0016g01480.t01 | Wine grape | endoplasmic reticulum, golgi | 39.14 | 29.53 |
| VIT_09s0002g01590.t01 | Wine grape | nucleus | 32.57 | 29.46 |
| CDY70458 | Canola | nucleus | 38.82 | 29.14 |
| KRH06120 | Soybean | nucleus | 29.93 | 28.53 |
| CDX81837 | Canola | nucleus | 25.0 | 25.5 |
| Os12t0618600-01 | Rice | nucleus | 24.67 | 24.12 |
| Os03t0647600-01 | Rice | nucleus | 27.63 | 23.73 |
| CDY30854 | Canola | nucleus | 10.86 | 22.6 |
| Os07t0158500-00 | Rice | nucleus | 21.05 | 16.89 |
Protein Annotations
| MapMan:15.5.51.1 | EntrezGene:4343866 | EMBL:AB288033 | EMBL:AK101684 | ProteinID:BAF22154.1 | ProteinID:BAT02585.1 |
| InterPro:CCAAT-binding_factor_CS | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016602 | InterPro:IPR001289 |
| InterPro:NFYA | EnsemblPlantsGene:Os07g0608200 | EnsemblPlants:Os07t0608200-01 | PFAM:PF02045 | PRINTS:PR00616 | ScanProsite:PS00686 |
| PFscan:PS51152 | PANTHER:PTHR12632 | PANTHER:PTHR12632:SF27 | UniProt:Q0D4R9 | SMART:SM00521 | UniParc:UPI0000E12BE6 |
| RefSeq:XP_015646559.1 | RefSeq:XP_015646560.1 | RefSeq:XP_015646561.1 | RefSeq:XP_015646562.1 | SEG:seg | : |
Description
HAP2 SUBUNIT OF CCAAT-BOX BINDING COMPLEXSimilar to CCAAT-binding transcription factor subunit B (CBF-B) (NF-Y protein chain A) (NF-YA) (CAAT-box DNA binding protein subunit A). Splice isoform Short. (Os07t0608200-01)
Coordinates
chr7:-:24996740..25001214
Molecular Weight (calculated)
33499.8 Da
IEP (calculated)
8.637
GRAVY (calculated)
-0.929
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MLMLLRQMED HRAHTTPNYD FFSGDYQMKQ LGHKMYDQDS PSSDSGQSHQ EESAMNDSSP NERHTSTQSD NDDGHQMPDQ DKTKSVSSLG NPGALPPKLN
101: YSQSFACIPY TADAYYGGVL TGYSSHAIVH PQQNGTANSR VPLPVEPAAE EPIFVNAKQY HAILRRRQIR AKLEAQNKLV KGRKPYLHES RHRHAMKRAR
201: GSGGRFLNTK QLEEQKQQQE EEAASGGASS GNRTCLQNGT GSAPSASSPS EIASVSTSRE FLGNHEQSHF PSAGFLPTMS FRAQNGGDGK LVANAIHQRV
301: SMMR
101: YSQSFACIPY TADAYYGGVL TGYSSHAIVH PQQNGTANSR VPLPVEPAAE EPIFVNAKQY HAILRRRQIR AKLEAQNKLV KGRKPYLHES RHRHAMKRAR
201: GSGGRFLNTK QLEEQKQQQE EEAASGGASS GNRTCLQNGT GSAPSASSPS EIASVSTSRE FLGNHEQSHF PSAGFLPTMS FRAQNGGDGK LVANAIHQRV
301: SMMR
001: MMHQMLNKKD SATHSTLPYL NTSISWGVVP TDSVANRRGS AESLSLKVDS RPGHIQTTKQ ISFQDQDSSS TQSTGQSYTE VASSGDDNPS RQISFSAKSG
101: SEITQRKGFA SNPKQGSMTG FPNIHFAPAQ ANFSFHYADP HYGGLLAATY LPQAPTCNPQ MVSMIPGRVP LPAELTETDP VFVNAKQYHA IMRRRQQRAK
201: LEAQNKLIRA RKPYLHESRH VHALKRPRGS GGRFLNTKKL LQESEQAAAR EQEQDKLGQQ VNRKTNMSRF EAHMLQNNKD RSSTTSGSDI TSVSDGADIF
301: GHTEFQFSGF PTPINRAMLV HGQSNDMHGG GDMHHFSVHI
101: SEITQRKGFA SNPKQGSMTG FPNIHFAPAQ ANFSFHYADP HYGGLLAATY LPQAPTCNPQ MVSMIPGRVP LPAELTETDP VFVNAKQYHA IMRRRQQRAK
201: LEAQNKLIRA RKPYLHESRH VHALKRPRGS GGRFLNTKKL LQESEQAAAR EQEQDKLGQQ VNRKTNMSRF EAHMLQNNKD RSSTTSGSDI TSVSDGADIF
301: GHTEFQFSGF PTPINRAMLV HGQSNDMHGG GDMHHFSVHI
Arabidopsis Description
HAP2CNuclear factor Y, subunit A3 [Source:UniProtKB/TrEMBL;Acc:F4IEZ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.