Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d029489_P002 | Maize | nucleus | 26.39 | 63.33 |
| Solyc08g062210.2.1 | Tomato | nucleus | 80.56 | 53.54 |
| Os03t0174900-01 | Rice | vacuole | 32.41 | 33.49 |
| TraesCS4B01G290400.1 | Wheat | nucleus | 33.33 | 29.51 |
| EER92762 | Sorghum | nucleus | 33.8 | 29.44 |
| TraesCS4D01G289600.1 | Wheat | nucleus | 32.87 | 29.34 |
| TraesCS6B01G366100.2 | Wheat | nucleus | 34.26 | 29.02 |
| TraesCS6D01G315300.1 | Wheat | nucleus | 33.8 | 28.74 |
| Os02t0776400-01 | Rice | nucleus | 35.65 | 28.52 |
| TraesCS6A01G335400.1 | Wheat | nucleus | 33.33 | 28.35 |
| GSMUA_Achr8P16700_001 | Banana | nucleus | 36.57 | 27.43 |
| Zm00001d018255_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 36.11 | 26.62 |
| HORVU6Hr1G081080.12 | Barley | nucleus | 34.26 | 26.33 |
| OQU85816 | Sorghum | nucleus | 37.04 | 26.32 |
| Os07t0608200-01 | Rice | nucleus | 37.04 | 26.32 |
| PGSC0003DMT400021053 | Potato | nucleus | 29.17 | 26.25 |
| HORVU2Hr1G032130.4 | Barley | nucleus | 36.11 | 26.0 |
| GSMUA_Achr2P21730_001 | Banana | nucleus | 34.72 | 25.77 |
| EER94699 | Sorghum | nucleus | 36.57 | 25.57 |
| GSMUA_Achr8P30700_001 | Banana | nucleus | 37.5 | 25.55 |
| HORVU4Hr1G075830.4 | Barley | nucleus | 34.26 | 25.52 |
| PGSC0003DMT400006358 | Potato | nucleus | 33.33 | 25.44 |
| TraesCS2A01G172500.1 | Wheat | nucleus | 35.65 | 25.41 |
| TraesCS2B01G198700.1 | Wheat | nucleus | 35.19 | 25.33 |
| PGSC0003DMT400030813 | Potato | nucleus | 23.61 | 25.25 |
| PGSC0003DMT400054416 | Potato | nucleus | 24.54 | 25.24 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.11 | 25.0 |
| Zm00001d022109_P003 | Maize | nucleus | 34.72 | 24.92 |
| Os03t0411100-01 | Rice | nucleus | 35.65 | 24.29 |
| EER99688 | Sorghum | nucleus | 33.8 | 24.25 |
| Zm00001d006835_P002 | Maize | nucleus | 33.33 | 24.0 |
| PGSC0003DMT400000740 | Potato | nucleus | 32.87 | 23.59 |
| PGSC0003DMT400072322 | Potato | nucleus | 20.83 | 22.96 |
| TraesCS2D01G179600.2 | Wheat | nucleus | 34.72 | 22.39 |
| PGSC0003DMT400017698 | Potato | nucleus | 27.78 | 19.8 |
| Zm00001d027874_P004 | Maize | nucleus | 24.07 | 19.77 |
| PGSC0003DMT400018959 | Potato | nucleus | 26.85 | 19.33 |
| PGSC0003DMT400027785 | Potato | nucleus | 27.31 | 19.03 |
| PGSC0003DMT400055061 | Potato | nucleus | 26.85 | 18.65 |
| Zm00001d026305_P002 | Maize | nucleus | 24.54 | 11.73 |
Protein Annotations
| MapMan:15.5.51.1 | InterPro:CCAAT-binding_factor_CS | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016602 |
| InterPro:IPR001289 | UniProt:M1BYT6 | InterPro:NFYA | PFAM:PF02045 | EnsemblPlantsGene:PGSC0003DMG400021747 | PGSC:PGSC0003DMG400021747 |
| EnsemblPlants:PGSC0003DMT400055982 | PRINTS:PR00616 | ScanProsite:PS00686 | PFscan:PS51152 | PANTHER:PTHR12632 | PANTHER:PTHR12632:SF8 |
| SMART:SM00521 | UniParc:UPI0002957263 | SEG:seg | : | : | : |
Description
YA2 [Source:PGSC_GENE;Acc:PGSC0003DMG400021747]
Coordinates
chr8:+:34346250..34352260
Molecular Weight (calculated)
24321.2 Da
IEP (calculated)
9.798
GRAVY (calculated)
-0.414
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MMFLMDEPLI TKMFDLYEIV VAVNPRSYSA ILDGVVELSA ILDGVVDSTQ MIYPQMVGVT STRVALPLEC TESLPIYVNA KQYSAILKRR QVRAKLEAQN
101: KLVKDRKPYL HESRHRHAMK RVRGSGGRFL NTKNMQQSKP SSPKHDRNIF KRQAGGNLSS SMVQHSESGS WGTSTQSGSD VTSIFSGDNM FQQPEFRVSG
201: FPFHMQEAED FMHVGT
101: KLVKDRKPYL HESRHRHAMK RVRGSGGRFL NTKNMQQSKP SSPKHDRNIF KRQAGGNLSS SMVQHSESGS WGTSTQSGSD VTSIFSGDNM FQQPEFRVSG
201: FPFHMQEAED FMHVGT
001: MMHQMLNKKD SATHSTLPYL NTSISWGVVP TDSVANRRGS AESLSLKVDS RPGHIQTTKQ ISFQDQDSSS TQSTGQSYTE VASSGDDNPS RQISFSAKSG
101: SEITQRKGFA SNPKQGSMTG FPNIHFAPAQ ANFSFHYADP HYGGLLAATY LPQAPTCNPQ MVSMIPGRVP LPAELTETDP VFVNAKQYHA IMRRRQQRAK
201: LEAQNKLIRA RKPYLHESRH VHALKRPRGS GGRFLNTKKL LQESEQAAAR EQEQDKLGQQ VNRKTNMSRF EAHMLQNNKD RSSTTSGSDI TSVSDGADIF
301: GHTEFQFSGF PTPINRAMLV HGQSNDMHGG GDMHHFSVHI
101: SEITQRKGFA SNPKQGSMTG FPNIHFAPAQ ANFSFHYADP HYGGLLAATY LPQAPTCNPQ MVSMIPGRVP LPAELTETDP VFVNAKQYHA IMRRRQQRAK
201: LEAQNKLIRA RKPYLHESRH VHALKRPRGS GGRFLNTKKL LQESEQAAAR EQEQDKLGQQ VNRKTNMSRF EAHMLQNNKD RSSTTSGSDI TSVSDGADIF
301: GHTEFQFSGF PTPINRAMLV HGQSNDMHGG GDMHHFSVHI
Arabidopsis Description
HAP2CNuclear factor Y, subunit A3 [Source:UniProtKB/TrEMBL;Acc:F4IEZ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.