Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400055982 | Potato | nucleus | 53.54 | 80.56 |
| Zm00001d029489_P002 | Maize | nucleus | 17.23 | 62.22 |
| Os03t0174900-01 | Rice | vacuole | 26.15 | 40.67 |
| EER92762 | Sorghum | nucleus | 29.23 | 38.31 |
| TraesCS4B01G290400.1 | Wheat | nucleus | 28.31 | 37.7 |
| TraesCS4D01G289600.1 | Wheat | nucleus | 28.0 | 37.6 |
| GSMUA_Achr8P16700_001 | Banana | nucleus | 32.62 | 36.81 |
| GSMUA_Achr2P21730_001 | Banana | nucleus | 31.08 | 34.71 |
| Os07t0608200-01 | Rice | nucleus | 32.31 | 34.54 |
| Solyc12g009050.1.1 | Tomato | nucleus | 26.77 | 34.39 |
| Os02t0776400-01 | Rice | nucleus | 28.31 | 34.07 |
| Solyc03g121940.2.1 | Tomato | nucleus | 25.23 | 34.02 |
| TraesCS6B01G366100.2 | Wheat | nucleus | 26.46 | 33.73 |
| TraesCS6A01G335400.1 | Wheat | nucleus | 26.15 | 33.46 |
| TraesCS6D01G315300.1 | Wheat | nucleus | 25.85 | 33.07 |
| HORVU2Hr1G032130.4 | Barley | nucleus | 30.46 | 33.0 |
| Solyc10g079150.1.1 | Tomato | nucleus | 22.15 | 32.88 |
| HORVU4Hr1G075830.4 | Barley | nucleus | 29.23 | 32.76 |
| TraesCS2B01G198700.1 | Wheat | nucleus | 29.85 | 32.33 |
| Os03t0411100-01 | Rice | nucleus | 31.38 | 32.18 |
| TraesCS2A01G172500.1 | Wheat | nucleus | 29.85 | 32.01 |
| Zm00001d022109_P003 | Maize | nucleus | 29.54 | 31.89 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.46 | 31.73 |
| HORVU6Hr1G081080.12 | Barley | nucleus | 27.38 | 31.67 |
| EER99688 | Sorghum | nucleus | 29.23 | 31.56 |
| Solyc02g069860.2.1 | Tomato | nucleus | 20.0 | 31.25 |
| Zm00001d006835_P002 | Maize | nucleus | 28.62 | 31.0 |
| GSMUA_Achr8P30700_001 | Banana | nucleus | 30.15 | 30.91 |
| EER94699 | Sorghum | nucleus | 29.23 | 30.74 |
| Zm00001d018255_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 26.77 | 29.69 |
| TraesCS2D01G179600.2 | Wheat | nucleus | 30.46 | 29.55 |
| OQU85816 | Sorghum | nucleus | 27.38 | 29.28 |
| Solyc10g081840.1.1 | Tomato | nucleus | 13.85 | 29.22 |
| Zm00001d027874_P004 | Maize | nucleus | 23.08 | 28.52 |
| Solyc11g065700.1.1 | Tomato | nucleus | 24.0 | 26.0 |
| Solyc01g008490.2.1 | Tomato | nucleus | 24.31 | 25.32 |
| Solyc01g087240.2.1 | Tomato | nucleus | 21.54 | 23.1 |
| Solyc01g006930.2.1 | Tomato | nucleus | 20.62 | 21.54 |
| Zm00001d026305_P002 | Maize | nucleus | 22.46 | 16.15 |
Protein Annotations
| MapMan:15.5.51.1 | InterPro:CCAAT-binding_factor_CS | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016602 |
| InterPro:IPR001289 | UniProt:K4CL10 | InterPro:NFYA | PFAM:PF02045 | PRINTS:PR00616 | ScanProsite:PS00686 |
| PFscan:PS51152 | PFscan:PS51257 | PANTHER:PTHR12632 | PANTHER:PTHR12632:SF8 | SMART:SM00521 | EnsemblPlantsGene:Solyc08g062210.2 |
| EnsemblPlants:Solyc08g062210.2.1 | UniParc:UPI000276B0B4 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr8:+:50754991..50764134
Molecular Weight (calculated)
35661.7 Da
IEP (calculated)
9.073
GRAVY (calculated)
-0.641
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSFSKKGGP GKEGQSFAPL FVSCSSMWNS SDKAEYAPSK KVLTGVESAL EHHSDIKKSE CQFQDQDSTS TLSTGQSNHV EAAMGKSNTV LQNVAVHPGW
101: GGTYEVQAES GTNASRSGES DTNTLPQPQV NHNHPMACVS YPFADTYFGR LVTAYGSNAI IYPQMVGVTS TRVALPLECT ESLPIYVNAK QYSAILKRRQ
201: VRAKLEAQNK LVKDRKPYLH ESRHRHAMKR ARGSGGRFLN TKNMQESKPS SPMHDRNIFK RQAGGNLSSS MVQHSESGSW GTSTQSGSDV TSIFSGDNMF
301: QQPEFRVSGF PFHIQEAEDF LHVGT
101: GGTYEVQAES GTNASRSGES DTNTLPQPQV NHNHPMACVS YPFADTYFGR LVTAYGSNAI IYPQMVGVTS TRVALPLECT ESLPIYVNAK QYSAILKRRQ
201: VRAKLEAQNK LVKDRKPYLH ESRHRHAMKR ARGSGGRFLN TKNMQESKPS SPMHDRNIFK RQAGGNLSSS MVQHSESGSW GTSTQSGSDV TSIFSGDNMF
301: QQPEFRVSGF PFHIQEAEDF LHVGT
001: MDKKVSFTSS VAHSTPPYLS TSISWGLPTK SNGVTESLSL KVVDARPERL INTKNISFQD QDSSSTLSSA QSSNDVTSSG DDNPSRQISF LAHSDVCKGF
101: EETQRKRFAI KSGSSTAGIA DIHSSPSKAN FSFHYADPHF GGLMPAAYLP QATIWNPQMT RVPLPFDLIE NEPVFVNAKQ FHAIMRRRQQ RAKLEAQNKL
201: IKARKPYLHE SRHVHALKRP RGSGGRFLNT KKLQESTDPK QDMPIQQQHA TGNMSRFVLY QLQNSNDCDC STTSRSDITS ASDSVNLFGH SEFLISDCPS
301: QTNPTMYVHG QSNDMHGGRN THHFSVHI
101: EETQRKRFAI KSGSSTAGIA DIHSSPSKAN FSFHYADPHF GGLMPAAYLP QATIWNPQMT RVPLPFDLIE NEPVFVNAKQ FHAIMRRRQQ RAKLEAQNKL
201: IKARKPYLHE SRHVHALKRP RGSGGRFLNT KKLQESTDPK QDMPIQQQHA TGNMSRFVLY QLQNSNDCDC STTSRSDITS ASDSVNLFGH SEFLISDCPS
301: QTNPTMYVHG QSNDMHGGRN THHFSVHI
Arabidopsis Description
NFYA8Uncharacterized protein At1g17590 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUW0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.