Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400072322 | Potato | nucleus | 82.47 | 64.8 |
| CDY05192 | Canola | nucleus | 36.36 | 31.28 |
| GSMUA_Achr7P07860_001 | Banana | nucleus | 39.61 | 30.35 |
| Solyc01g006930.2.1 | Tomato | nucleus | 59.09 | 29.26 |
| KRH68018 | Soybean | nucleus | 49.35 | 23.17 |
| Solyc02g069860.2.1 | Tomato | nucleus | 31.17 | 23.08 |
| CDY18809 | Canola | nucleus | 40.26 | 22.63 |
| Bra040529.1-P | Field mustard | nucleus | 40.26 | 22.06 |
| VIT_08s0032g01190.t01 | Wine grape | nucleus | 46.75 | 21.95 |
| Solyc10g079150.1.1 | Tomato | nucleus | 31.17 | 21.92 |
| KRH72156 | Soybean | nucleus | 46.75 | 21.49 |
| AT5G06510.2 | Thale cress | nucleus | 37.01 | 21.19 |
| KRG96274 | Soybean | endoplasmic reticulum, extracellular, vacuole | 47.4 | 21.1 |
| CDY14662 | Canola | nucleus | 38.31 | 21.0 |
| CDX74133 | Canola | nucleus | 38.31 | 21.0 |
| CDX98930 | Canola | nucleus | 36.36 | 20.97 |
| TraesCS5A01G373500.1 | Wheat | nucleus | 44.16 | 20.86 |
| KRH32866 | Soybean | nucleus | 44.16 | 20.8 |
| TraesCS5B01G375500.1 | Wheat | nucleus | 43.51 | 20.74 |
| Bra001164.1-P | Field mustard | nucleus | 37.66 | 20.64 |
| CDX70098 | Canola | nucleus | 35.71 | 20.6 |
| Bra009200.1-P | Field mustard | nucleus | 35.71 | 20.6 |
| TraesCS5D01G383000.1 | Wheat | nucleus | 42.86 | 20.31 |
| TraesCS5B01G028500.1 | Wheat | nucleus | 44.16 | 20.06 |
| TraesCS5A01G029900.1 | Wheat | nucleus | 44.16 | 19.94 |
| Os12t0618600-01 | Rice | nucleus | 40.26 | 19.94 |
| TraesCS5D01G037800.1 | Wheat | nucleus | 44.16 | 19.88 |
| HORVU5Hr1G007890.1 | Barley | nucleus | 43.51 | 19.65 |
| Zm00001d033215_P001 | Maize | nucleus | 40.91 | 19.57 |
| GSMUA_Achr4P28390_001 | Banana | nucleus | 40.91 | 19.57 |
| KXG37939 | Sorghum | nucleus | 43.51 | 19.42 |
| Zm00001d031092_P001 | Maize | nucleus | 41.56 | 19.39 |
| Solyc03g121940.2.1 | Tomato | nucleus | 29.87 | 19.09 |
| AT3G05690.2 | Thale cress | mitochondrion | 39.61 | 18.37 |
| Zm00001d013676_P002 | Maize | nucleus | 40.26 | 18.18 |
| Solyc12g009050.1.1 | Tomato | nucleus | 29.87 | 18.18 |
| GSMUA_Achr4P31420_001 | Banana | mitochondrion, nucleus | 39.61 | 18.1 |
| Os03t0647600-01 | Rice | nucleus | 40.91 | 17.8 |
| GSMUA_Achr5P02590_001 | Banana | nucleus | 37.01 | 17.59 |
| HORVU5Hr1G092700.5 | Barley | nucleus | 43.51 | 17.18 |
| Zm00001d007882_P001 | Maize | nucleus | 32.47 | 17.01 |
| Solyc01g087240.2.1 | Tomato | nucleus | 30.52 | 15.51 |
| OQU88458 | Sorghum | nucleus | 31.82 | 15.17 |
| OQU79642 | Sorghum | plastid | 40.91 | 15.04 |
| Solyc01g008490.2.1 | Tomato | nucleus | 29.22 | 14.42 |
| Solyc11g065700.1.1 | Tomato | nucleus | 27.27 | 14.0 |
| Solyc08g062210.2.1 | Tomato | nucleus | 29.22 | 13.85 |
| Os07t0158500-00 | Rice | nucleus | 33.77 | 13.72 |
Protein Annotations
| EnsemblPlants:Solyc10g081840.1.1 | EnsemblPlantsGene:Solyc10g081840.1 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001289 | InterPro:NFYA |
| PANTHER:PTHR12632 | PANTHER:PTHR12632:SF7 | PFAM:PF02045 | PFscan:PS51152 | PRINTS:PR00616 | SMART:SM00521 |
| UniParc:UPI0002769A86 | UniProt:K4D370 | MapMan:15.5.51.1 | : | : | : |
Description
No Description!
Coordinates
chr10:+:62805946..62809652
Molecular Weight (calculated)
18024.7 Da
IEP (calculated)
10.927
GRAVY (calculated)
-0.784
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MYINTGIYFR VILSMEQPMS FDSQSYNMDY QGHFDLGLFG QPLGRIMLPL NFTSHDETPI FVNAKQYHGI LRRRKFRTKE IEKNLLKPRK PFLHLSRHLH
101: AKRRPRGGGG RFLNTRKTDG SINNDANGTT KTSNKKCHHT RSQNSEVLQW CIQF
101: AKRRPRGGGG RFLNTRKTDG SINNDANGTT KTSNKKCHHT RSQNSEVLQW CIQF
001: MQMFEGDFIY AVIDLGGEKS SRDVPKPHVA FAMQSACFEF GFAQPMMYTK HPHVEQYYGV VSAYGSQRSS GRVMIPLKME TEEDGTIYVN SKQYHGIIRR
101: RQSRAKAEKL SRCRKPYMHH SRHLHAMRRP RGSGGRFLNT KTADAAKQSK PSNSQSSEVF HPENETINSS REANESNLSD SAVTSMDYFL SSSAYSPGGM
201: VMPIKWNAAA MDIGCCKLNI
101: RQSRAKAEKL SRCRKPYMHH SRHLHAMRRP RGSGGRFLNT KTADAAKQSK PSNSQSSEVF HPENETINSS REANESNLSD SAVTSMDYFL SSSAYSPGGM
201: VMPIKWNAAA MDIGCCKLNI
Arabidopsis Description
NFYA10NF-YA10 [Source:UniProtKB/TrEMBL;Acc:A0A178URE3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.