Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU88458 | Sorghum | nucleus | 67.35 | 61.3 |
| Zm00001d029489_P002 | Maize | nucleus | 13.61 | 44.44 |
| GSMUA_Achr7P07860_001 | Banana | nucleus | 28.23 | 41.29 |
| Os07t0158500-00 | Rice | nucleus | 46.6 | 36.15 |
| Solyc10g081840.1.1 | Tomato | nucleus | 17.01 | 32.47 |
| GSMUA_Achr4P28390_001 | Banana | nucleus | 32.65 | 29.81 |
| CDY05192 | Canola | nucleus | 18.03 | 29.61 |
| Zm00001d033215_P001 | Maize | nucleus | 31.29 | 28.57 |
| Zm00001d031092_P001 | Maize | nucleus | 30.95 | 27.58 |
| Zm00001d013676_P002 | Maize | nucleus | 31.29 | 26.98 |
| GSMUA_Achr4P31420_001 | Banana | mitochondrion, nucleus | 30.61 | 26.71 |
| PGSC0003DMT400072322 | Potato | nucleus | 17.69 | 26.53 |
| GSMUA_Achr5P02590_001 | Banana | nucleus | 28.91 | 26.23 |
| AT5G06510.2 | Thale cress | nucleus | 23.13 | 25.28 |
| CDX98930 | Canola | nucleus | 22.79 | 25.09 |
| Zm00001d033602_P002 | Maize | nucleus | 21.77 | 24.24 |
| Solyc01g006930.2.1 | Tomato | nucleus | 25.51 | 24.12 |
| PGSC0003DMT400055061 | Potato | nucleus | 25.51 | 24.12 |
| CDX70098 | Canola | nucleus | 21.77 | 23.97 |
| Bra009200.1-P | Field mustard | nucleus | 21.77 | 23.97 |
| KRH72156 | Soybean | nucleus | 26.87 | 23.58 |
| CDY18809 | Canola | nucleus | 21.77 | 23.36 |
| Bra040529.1-P | Field mustard | nucleus | 21.77 | 22.78 |
| KRH32866 | Soybean | nucleus | 25.17 | 22.63 |
| Bra001164.1-P | Field mustard | nucleus | 21.43 | 22.42 |
| KRH68018 | Soybean | nucleus | 24.83 | 22.26 |
| CDY14662 | Canola | nucleus | 21.09 | 22.06 |
| CDX74133 | Canola | nucleus | 21.09 | 22.06 |
| VIT_08s0032g01190.t01 | Wine grape | nucleus | 23.47 | 21.04 |
| KRG96274 | Soybean | endoplasmic reticulum, extracellular, vacuole | 24.49 | 20.81 |
| AT3G05690.2 | Thale cress | mitochondrion | 22.79 | 20.18 |
| Zm00001d041491_P001 | Maize | nucleus | 18.37 | 18.69 |
| Zm00001d018255_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 18.37 | 18.43 |
| Zm00001d006835_P002 | Maize | nucleus | 18.03 | 17.67 |
| Zm00001d022109_P003 | Maize | nucleus | 18.03 | 17.61 |
| Zm00001d027874_P004 | Maize | nucleus | 14.63 | 16.35 |
| Zm00001d026305_P002 | Maize | nucleus | 12.24 | 7.96 |
Protein Annotations
| MapMan:15.5.51.1 | UniProt:A0A1D6F9G6 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001289 | InterPro:NFYA |
| ProteinID:ONM27790.1 | PFAM:PF02045 | PRINTS:PR00616 | PFscan:PS51152 | PANTHER:PTHR12632 | PANTHER:PTHR12632:SF8 |
| SMART:SM00521 | UniParc:UPI0002218BA8 | EnsemblPlantsGene:Zm00001d007882 | EnsemblPlants:Zm00001d007882_P001 | EnsemblPlants:Zm00001d007882_T001 | SEG:seg |
Description
CCAAT-HAP2-transcription factor 214Nuclear transcription factor Y subunit A-10
Coordinates
chr2:-:241672970..241675483
Molecular Weight (calculated)
31337.8 Da
IEP (calculated)
10.100
GRAVY (calculated)
-0.443
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MNLQQEHLLF SVSRPASRPS AATTTGFQDH GLGGFQVIAT DGGAGPAAPW WAAAAPQGCA AAKFPIGSPP SGGDPDLRRH ELRFVHDHES SSAPAGGASS
101: AAMAAHPELL LLDRYQYHHH GRFDLTVGQS MVLNNDSAIA GHQIYGATAY YHPFYGAQAL HGRVLLPPAI AADEPVYVNA KQFNGILRRR LARAKRAAAT
201: DRRVSGSRKP YLHESRHLHA LRRARGTGGR FLNTRSRDGD PEAGSAGKAA RLQEEDRQAD AVFLSSLASM AGGDATRWPS APSRGRGCCD LLKA
101: AAMAAHPELL LLDRYQYHHH GRFDLTVGQS MVLNNDSAIA GHQIYGATAY YHPFYGAQAL HGRVLLPPAI AADEPVYVNA KQFNGILRRR LARAKRAAAT
201: DRRVSGSRKP YLHESRHLHA LRRARGTGGR FLNTRSRDGD PEAGSAGKAA RLQEEDRQAD AVFLSSLASM AGGDATRWPS APSRGRGCCD LLKA
001: MYTKHPHVEQ YYGVVSAYGS QRSSGRVMIP LKMETEEDGT IYVNSKQYHG IIRRRQSRAK AEKLSRCRKP YMHHSRHLHA MRRPRGSGGR FLNTKTADAA
101: KQSKPSNSQS SEVFHPENET INSSREANES NLSDSAVTSM DYFLSSSAYS PGGMVMPIKW NAAAMDIGCC KLNI
101: KQSKPSNSQS SEVFHPENET INSSREANES NLSDSAVTSM DYFLSSSAYS PGGMVMPIKW NAAAMDIGCC KLNI
Arabidopsis Description
NFYA10NF-YA10 [Source:UniProtKB/TrEMBL;Acc:A0A178URE3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.