Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG37797 | Sorghum | nucleus | 90.91 | 89.89 |
| Os03t0696300-01 | Rice | nucleus | 73.11 | 74.23 |
| TraesCS4D01G033700.1 | Wheat | nucleus | 70.83 | 70.3 |
| TraesCS4A01G277300.1 | Wheat | nucleus | 68.18 | 67.67 |
| Zm00001d029489_P002 | Maize | nucleus | 17.8 | 52.22 |
| GSMUA_Achr4P03600_001 | Banana | nucleus | 41.67 | 36.91 |
| CDX78492 | Canola | nucleus | 28.03 | 36.1 |
| GSMUA_Achr3P29730_001 | Banana | nucleus | 43.18 | 35.62 |
| Bra023913.1-P | Field mustard | nucleus | 23.48 | 34.44 |
| CDY37330 | Canola | nucleus | 23.48 | 34.44 |
| Bra006165.1-P | Field mustard | nucleus | 32.58 | 33.86 |
| CDX85686 | Canola | nucleus | 29.92 | 33.47 |
| Bra023378.1-P | Field mustard | nucleus | 30.3 | 33.33 |
| CDX91161 | Canola | nucleus | 27.65 | 33.33 |
| Solyc10g079150.1.1 | Tomato | nucleus | 27.27 | 32.88 |
| CDX70480 | Canola | nucleus | 32.2 | 32.82 |
| AT5G12840.3 | Thale cress | nucleus | 33.71 | 32.72 |
| KRH27472 | Soybean | nucleus | 36.74 | 32.01 |
| VIT_08s0007g08250.t01 | Wine grape | nucleus | 42.8 | 31.92 |
| PGSC0003DMT400021053 | Potato | nucleus | 28.79 | 31.67 |
| VIT_06s0004g02270.t01 | Wine grape | nucleus | 36.36 | 31.37 |
| GSMUA_Achr4P11090_001 | Banana | vacuole | 43.18 | 31.15 |
| KRH20817 | Soybean | nucleus | 34.85 | 30.26 |
| CDX97206 | Canola | nucleus | 32.58 | 30.18 |
| CDY53967 | Canola | nucleus | 32.2 | 29.93 |
| KRG98391 | Soybean | nucleus | 38.26 | 29.88 |
| KRH46473 | Soybean | nucleus | 37.88 | 29.76 |
| Bra008878.1-P | Field mustard | nucleus | 31.82 | 29.68 |
| CDX82223 | Canola | nucleus | 31.44 | 29.64 |
| CDY06393 | Canola | nucleus | 33.33 | 29.53 |
| AT3G20910.1 | Thale cress | nucleus | 33.33 | 29.04 |
| Bra031242.1-P | Field mustard | nucleus | 32.2 | 28.81 |
| Zm00001d027874_P004 | Maize | nucleus | 28.03 | 28.14 |
| Zm00001d041491_P001 | Maize | nucleus | 30.68 | 28.03 |
| VIT_13s0064g00860.t01 | Wine grape | nucleus | 42.8 | 27.9 |
| CDY19591 | Canola | nucleus | 31.06 | 27.89 |
| CDY32398 | Canola | nucleus | 30.68 | 27.18 |
| KRH73967 | Soybean | nucleus | 31.44 | 27.04 |
| KRH14162 | Soybean | nucleus | 31.06 | 26.71 |
| Bra001806.1-P | Field mustard | nucleus | 31.06 | 26.62 |
| Zm00001d022109_P003 | Maize | nucleus | 29.92 | 26.25 |
| Zm00001d006835_P002 | Maize | nucleus | 29.55 | 26.0 |
| Zm00001d018255_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 26.89 | 24.23 |
| Zm00001d033215_P001 | Maize | nucleus | 28.79 | 23.6 |
| Zm00001d031092_P001 | Maize | nucleus | 28.41 | 22.73 |
| Zm00001d007882_P001 | Maize | nucleus | 24.24 | 21.77 |
| Zm00001d013676_P002 | Maize | nucleus | 27.65 | 21.41 |
| Zm00001d026305_P002 | Maize | nucleus | 22.73 | 13.27 |
Protein Annotations
| EntrezGene:100282719 | MapMan:15.5.51.1 | UniProt:B6TAR1 | EMBL:BT063803 | InterPro:CCAAT-binding_factor_CS | EMBL:EU962076 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016602 | InterPro:IPR001289 | EMBL:KJ728293 |
| EMBL:KM655748 | InterPro:NFYA | ProteinID:ONM08011.1 | PFAM:PF02045 | PRINTS:PR00616 | ScanProsite:PS00686 |
| PFscan:PS51152 | PANTHER:PTHR12632 | SMART:SM00521 | UniParc:UPI000152A258 | EnsemblPlantsGene:Zm00001d033602 | EnsemblPlants:Zm00001d033602_P002 |
| EnsemblPlants:Zm00001d033602_T002 | SEG:seg | : | : | : | : |
Description
CCAAT-HAP2-transcription factor 216Nuclear transcription factor Y subunit A-9
Coordinates
chr1:+:268308237..268315814
Molecular Weight (calculated)
27790.4 Da
IEP (calculated)
9.604
GRAVY (calculated)
-0.609
Length
264 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSMESRPGR TNLVEPIGHG AALPSGGQAV QPWWTSSGAV LGAVSPAVVA VAPGSGTGIS LSSSPAGGSG GGGAAKGAAS DESSEDSRRS GEPKDGSASQ
101: EKNHATSQIP ALAPEYLAPY SQLELNQSIA SAAYQYPDPY YAGMVAPYGS HAVAHFQLPG LTQSRMPLPL EVSEEPVYVN AKQYHGILRR RQSRAKAELE
201: KKVVKARKPY LHESRHQHAM RRARGNGGRF LNTKKSDSGA PNGGENAEHL HVPPDLLQLR QNEA
101: EKNHATSQIP ALAPEYLAPY SQLELNQSIA SAAYQYPDPY YAGMVAPYGS HAVAHFQLPG LTQSRMPLPL EVSEEPVYVN AKQYHGILRR RQSRAKAELE
201: KKVVKARKPY LHESRHQHAM RRARGNGGRF LNTKKSDSGA PNGGENAEHL HVPPDLLQLR QNEA
001: MQSKPGRENE EEVNNHHAVQ QPMMYAEPWW KNNSFGVVPQ ARPSGIPSNS SSLDCPNGSE SNDVHSASED GALNGENDGT WKDSQAATSS RSDNHGMEGN
101: DPALSIRNMH DQPLVQPPEL VGHYIACVPN PYQDPYYGGL MGAYGHQQLG FRPYLGMPRE RTALPLDMAQ EPVYVNAKQY EGILRRRKAR AKAELERKVI
201: RDRKPYLHES RHKHAMRRAR ASGGRFAKKS EVEAGEDAGG RDRERGSATN SSGSEQVETD SNETLNSSGA P
101: DPALSIRNMH DQPLVQPPEL VGHYIACVPN PYQDPYYGGL MGAYGHQQLG FRPYLGMPRE RTALPLDMAQ EPVYVNAKQY EGILRRRKAR AKAELERKVI
201: RDRKPYLHES RHKHAMRRAR ASGGRFAKKS EVEAGEDAGG RDRERGSATN SSGSEQVETD SNETLNSSGA P
Arabidopsis Description
NFYA1Nuclear transcription factor Y subunit A-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXV5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.