Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU79642 | Sorghum | plastid | 83.33 | 65.63 |
| Os12t0618600-01 | Rice | nucleus | 60.61 | 64.31 |
| TraesCS5D01G037800.1 | Wheat | nucleus | 64.24 | 61.99 |
| TraesCS5B01G028500.1 | Wheat | nucleus | 63.33 | 61.65 |
| TraesCS5A01G029900.1 | Wheat | nucleus | 63.64 | 61.58 |
| HORVU5Hr1G007890.1 | Barley | nucleus | 63.03 | 61.0 |
| Zm00001d033215_P001 | Maize | nucleus | 51.82 | 53.11 |
| Zm00001d013676_P002 | Maize | nucleus | 52.12 | 50.44 |
| Zm00001d029489_P002 | Maize | nucleus | 13.33 | 48.89 |
| Solyc10g081840.1.1 | Tomato | nucleus | 19.39 | 41.56 |
| CDY05192 | Canola | nucleus | 21.52 | 39.66 |
| PGSC0003DMT400072322 | Potato | nucleus | 22.12 | 37.24 |
| VIT_08s0032g01190.t01 | Wine grape | nucleus | 34.85 | 35.06 |
| KRH72156 | Soybean | nucleus | 35.45 | 34.93 |
| KRH68018 | Soybean | nucleus | 33.64 | 33.84 |
| AT5G06510.2 | Thale cress | nucleus | 27.58 | 33.83 |
| CDY18809 | Canola | nucleus | 27.88 | 33.58 |
| PGSC0003DMT400055061 | Potato | nucleus | 31.21 | 33.12 |
| CDX70098 | Canola | nucleus | 26.67 | 32.96 |
| Bra009200.1-P | Field mustard | nucleus | 26.67 | 32.96 |
| Solyc01g006930.2.1 | Tomato | nucleus | 30.91 | 32.8 |
| Bra040529.1-P | Field mustard | nucleus | 27.88 | 32.74 |
| KRH32866 | Soybean | nucleus | 32.12 | 32.42 |
| CDY14662 | Canola | nucleus | 27.58 | 32.38 |
| CDX74133 | Canola | nucleus | 27.58 | 32.38 |
| KRG96274 | Soybean | endoplasmic reticulum, extracellular, vacuole | 33.94 | 32.37 |
| Bra001164.1-P | Field mustard | nucleus | 27.27 | 32.03 |
| CDX98930 | Canola | nucleus | 25.15 | 31.09 |
| Zm00001d007882_P001 | Maize | nucleus | 27.58 | 30.95 |
| AT3G05690.2 | Thale cress | mitochondrion | 29.39 | 29.22 |
| Zm00001d033602_P002 | Maize | nucleus | 22.73 | 28.41 |
| Zm00001d022109_P003 | Maize | nucleus | 21.82 | 23.92 |
| Zm00001d006835_P002 | Maize | nucleus | 20.61 | 22.67 |
| Zm00001d018255_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 20.0 | 22.53 |
| Zm00001d041491_P001 | Maize | nucleus | 19.7 | 22.49 |
| Zm00001d027874_P004 | Maize | nucleus | 15.76 | 19.77 |
| Zm00001d026305_P002 | Maize | nucleus | 13.94 | 10.18 |
Protein Annotations
| MapMan:15.5.51.1 | UniProt:B4F9M3 | EMBL:BT033811 | EMBL:BT067827 | InterPro:CCAAT-binding_factor_CS | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016602 | InterPro:IPR001289 | InterPro:NFYA | ProteinID:ONM02156.1 |
| ProteinID:ONM02157.1 | PFAM:PF02045 | PRINTS:PR00616 | ScanProsite:PS00686 | PFscan:PS51152 | PANTHER:PTHR12632 |
| PANTHER:PTHR12632:SF17 | SMART:SM00521 | UniParc:UPI00017B61CB | EnsemblPlantsGene:Zm00001d031092 | EnsemblPlants:Zm00001d031092_P001 | EnsemblPlants:Zm00001d031092_T001 |
| SEG:seg | : | : | : | : | : |
Description
CCAAT-HAP2-transcription factor 25Nuclear transcription factor Y subunit A-10
Coordinates
chr1:-:176869959..176875644
Molecular Weight (calculated)
35233.8 Da
IEP (calculated)
8.936
GRAVY (calculated)
-0.461
Length
330 amino acids
Sequence
(BLAST)
(BLAST)
001: MMSFRSSSHE GFGFGHAAAA ASGAPLPWWA GPAPMLSGEP LALSPEAHCR DGRIQAPQGP PVPSVKAPVL APQQPPPLPE RGIPELLNLS VDPQGKGKKG
101: SDHSATIALQ SPFAIYNAHF ELGLGQSMIS ADNSYADQHY GLLSPYPVGA TPGGRLLIPL NRPTEAPIYV NAKQYDAIMR RRCARAKAER ENRLVKGRKP
201: YLHESRHQHA LRRPRGSGGR FLNTKKESSG KDAGGGSKAM FSNPLMRQVA SPSSEIQQSD LGNPSSVSSL SGSEVSSMYD HEDAGHCHGL DHPFFTRLPS
301: IMDGGEHGVI VGNPFKWAAA SEVCCDLLKA
101: SDHSATIALQ SPFAIYNAHF ELGLGQSMIS ADNSYADQHY GLLSPYPVGA TPGGRLLIPL NRPTEAPIYV NAKQYDAIMR RRCARAKAER ENRLVKGRKP
201: YLHESRHQHA LRRPRGSGGR FLNTKKESSG KDAGGGSKAM FSNPLMRQVA SPSSEIQQSD LGNPSSVSSL SGSEVSSMYD HEDAGHCHGL DHPFFTRLPS
301: IMDGGEHGVI VGNPFKWAAA SEVCCDLLKA
001: MQTEELLSPP QTPWWNAFGS QPLTTESLSG EASDSFTGVK AVTTEAEQGV VDKQTSTTLF TFSPGGEKSS RDVPKPHVAF AMQSACFEFG FAQPMMYTKH
101: PHVEQYYGVV SAYGSQRSSG RVMIPLKMET EEDGTIYVNS KQYHGIIRRR QSRAKAEKLS RCRKPYMHHS RHLHAMRRPR GSGGRFLNTK TADAAKQSKP
201: SNSQSSEVFH PENETINSSR EANESNLSDS AVTSMDYFLS SSAYSPGGMV MPIKWNAAAM DIGCCKLNI
101: PHVEQYYGVV SAYGSQRSSG RVMIPLKMET EEDGTIYVNS KQYHGIIRRR QSRAKAEKLS RCRKPYMHHS RHLHAMRRPR GSGGRFLNTK TADAAKQSKP
201: SNSQSSEVFH PENETINSSR EANESNLSDS AVTSMDYFLS SSAYSPGGMV MPIKWNAAAM DIGCCKLNI
Arabidopsis Description
NFYA10NF-YA10 [Source:UniProtKB/TrEMBL;Acc:A0A178URE3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.