Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH32866 | Soybean | nucleus | 84.78 | 86.85 |
| KRH68018 | Soybean | nucleus | 72.24 | 73.78 |
| KRG96274 | Soybean | endoplasmic reticulum, extracellular, vacuole | 72.24 | 69.94 |
| VIT_08s0032g01190.t01 | Wine grape | nucleus | 56.12 | 57.32 |
| CDY05192 | Canola | nucleus | 26.87 | 50.28 |
| PGSC0003DMT400055061 | Potato | nucleus | 45.97 | 49.52 |
| Solyc01g006930.2.1 | Tomato | nucleus | 45.97 | 49.52 |
| AT5G06510.2 | Thale cress | nucleus | 39.1 | 48.7 |
| CDX98930 | Canola | nucleus | 37.31 | 46.82 |
| Solyc10g081840.1.1 | Tomato | nucleus | 21.49 | 46.75 |
| GSMUA_Achr7P07860_001 | Banana | nucleus | 27.46 | 45.77 |
| Bra009200.1-P | Field mustard | nucleus | 36.42 | 45.69 |
| CDX70098 | Canola | nucleus | 36.42 | 45.69 |
| CDY18809 | Canola | nucleus | 37.31 | 45.62 |
| PGSC0003DMT400072322 | Potato | nucleus | 26.57 | 45.41 |
| Bra001164.1-P | Field mustard | nucleus | 37.91 | 45.2 |
| CDY14662 | Canola | nucleus | 37.61 | 44.84 |
| Bra040529.1-P | Field mustard | nucleus | 37.61 | 44.84 |
| CDX74133 | Canola | nucleus | 37.61 | 44.84 |
| AT3G05690.2 | Thale cress | mitochondrion | 41.19 | 41.57 |
| GSMUA_Achr4P31420_001 | Banana | mitochondrion, nucleus | 39.4 | 39.17 |
| Os12t0618600-01 | Rice | nucleus | 36.12 | 38.91 |
| TraesCS5A01G029900.1 | Wheat | nucleus | 39.1 | 38.42 |
| TraesCS5B01G028500.1 | Wheat | nucleus | 38.81 | 38.35 |
| TraesCS5D01G037800.1 | Wheat | nucleus | 39.1 | 38.3 |
| HORVU5Hr1G007890.1 | Barley | nucleus | 38.21 | 37.54 |
| GSMUA_Achr4P28390_001 | Banana | nucleus | 35.82 | 37.27 |
| TraesCS5A01G373500.1 | Wheat | nucleus | 35.52 | 36.5 |
| KRH42997 | Soybean | nucleus | 22.39 | 36.41 |
| TraesCS5D01G383000.1 | Wheat | nucleus | 35.22 | 36.31 |
| TraesCS5B01G375500.1 | Wheat | nucleus | 34.93 | 36.22 |
| GSMUA_Achr5P02590_001 | Banana | nucleus | 34.63 | 35.8 |
| Zm00001d033215_P001 | Maize | nucleus | 34.33 | 35.71 |
| Zm00001d031092_P001 | Maize | nucleus | 34.93 | 35.45 |
| KRH59113 | Soybean | nucleus | 22.09 | 34.1 |
| KRH11777 | Soybean | nucleus | 20.0 | 32.68 |
| KXG37939 | Sorghum | nucleus | 33.43 | 32.46 |
| KRH02649 | Soybean | nucleus | 20.6 | 32.39 |
| Zm00001d013676_P002 | Maize | nucleus | 32.84 | 32.26 |
| Os03t0647600-01 | Rice | nucleus | 33.43 | 31.64 |
| KRH37469 | Soybean | nucleus | 21.49 | 31.58 |
| KRH36784 | Soybean | nucleus | 20.6 | 31.51 |
| KRH19255 | Soybean | nucleus | 21.49 | 30.9 |
| KRH12475 | Soybean | nucleus | 20.9 | 30.7 |
| HORVU5Hr1G092700.5 | Barley | nucleus | 35.22 | 30.26 |
| OQU79642 | Sorghum | plastid | 34.93 | 27.92 |
| KRH27472 | Soybean | nucleus | 25.07 | 27.72 |
| KRH20817 | Soybean | nucleus | 24.78 | 27.3 |
| Zm00001d007882_P001 | Maize | nucleus | 23.58 | 26.87 |
| Os07t0158500-00 | Rice | nucleus | 30.15 | 26.65 |
| KRG98391 | Soybean | nucleus | 25.97 | 25.74 |
| KRH46473 | Soybean | nucleus | 25.37 | 25.3 |
| KRH10071 | Soybean | nucleus | 21.19 | 23.91 |
| OQU88458 | Sorghum | nucleus | 22.99 | 23.84 |
| KRH14162 | Soybean | nucleus | 21.79 | 23.78 |
| KRH73967 | Soybean | nucleus | 21.79 | 23.78 |
| KRH06120 | Soybean | nucleus | 22.39 | 23.51 |
| KRH47551 | Soybean | nucleus | 23.88 | 22.99 |
Protein Annotations
| EntrezGene:100808195 | MapMan:15.5.51.1 | EMBL:ACUP02001174 | EnsemblPlantsGene:GLYMA_02G195000 | GO:GO:0003674 | GO:GO:0003700 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR001289 | UniProt:K7K9J7 | EnsemblPlants:KRH72156 | ProteinID:KRH72156 | ProteinID:KRH72156.1 | ProteinID:KRH72157.1 |
| ProteinID:KRH72158.1 | ProteinID:KRH72159.1 | ProteinID:KRH72160.1 | InterPro:NFYA | PFAM:PF02045 | PRINTS:PR00616 |
| PFscan:PS51152 | PANTHER:PTHR12632 | PANTHER:PTHR12632:SF7 | SMART:SM00521 | UniParc:UPI00029692D3 | SEG:seg |
Description
hypothetical protein
Coordinates
chr2:+:36851859..36857360
Molecular Weight (calculated)
36825.5 Da
IEP (calculated)
9.383
GRAVY (calculated)
-0.523
Length
335 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMQTVYLKE HEGLVHSSVG QLSSVTSAPW WSALGSQPVY GEYCGQMKSF SLEISNYVDQ FGAGKQAARG VEQLLDKGHT TQFTIFPGIS SSDDCKMSGD
101: AQNPQATLSL QSSLAEPHNR FEIGVNQPMI CAKYPYMDQF YGLFSAYGPQ ISGRIMLPIN LTSDEGPTYV NAKQYHGIIR RRQSRAKAVL ENKMIKRRKP
201: YMHESRHLHA TRRPRGCGGR FLNTKSSTDG NGKNESEVIK TSGRQFQSSA SQSSEVLQSE VGMLNSSKQT NRSSPNISGS EVTSMYSREG FDGFSVNPLG
301: SSVHSLADMI GSEHGIIRPT KWVAAVPGNC YNLKI
101: AQNPQATLSL QSSLAEPHNR FEIGVNQPMI CAKYPYMDQF YGLFSAYGPQ ISGRIMLPIN LTSDEGPTYV NAKQYHGIIR RRQSRAKAVL ENKMIKRRKP
201: YMHESRHLHA TRRPRGCGGR FLNTKSSTDG NGKNESEVIK TSGRQFQSSA SQSSEVLQSE VGMLNSSKQT NRSSPNISGS EVTSMYSREG FDGFSVNPLG
301: SSVHSLADMI GSEHGIIRPT KWVAAVPGNC YNLKI
001: MAMQTVREGL FSAPQTSWWT AFGSQPLAPE SLAGDSDSFA GVKVGSVGET GQRVDKQSNS ATHLAFSLGD VKSPRLVPKP HGATFSMQSP CLELGFSQPP
101: IYTKYPYGEQ QYYGVVSAYG SQSRVMLPLN METEDSTIYV NSKQYHGIIR RRQSRAKAAA VLDQKKLSSR CRKPYMHHSR HLHALRRPRG SGGRFLNTKS
201: QNLENSGTNA KKGDGSMQIQ SQPKPQQSNS QNSEVVHPEN GTMNLSNGLN VSGSEVTSMN YFLSSPVHSL GGMVMPSKWI AAAAAMDNGC CNFKT
101: IYTKYPYGEQ QYYGVVSAYG SQSRVMLPLN METEDSTIYV NSKQYHGIIR RRQSRAKAAA VLDQKKLSSR CRKPYMHHSR HLHALRRPRG SGGRFLNTKS
201: QNLENSGTNA KKGDGSMQIQ SQPKPQQSNS QNSEVVHPEN GTMNLSNGLN VSGSEVTSMN YFLSSPVHSL GGMVMPSKWI AAAAAMDNGC CNFKT
Arabidopsis Description
UNE8Nuclear factor Y, subunit A2 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSX7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.