Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400055061 | Potato | nucleus | 92.93 | 92.93 |
| Solyc10g081840.1.1 | Tomato | nucleus | 29.26 | 59.09 |
| KRH68018 | Soybean | nucleus | 50.48 | 47.87 |
| VIT_08s0032g01190.t01 | Wine grape | nucleus | 49.84 | 47.26 |
| KRH72156 | Soybean | nucleus | 49.52 | 45.97 |
| GSMUA_Achr7P07860_001 | Banana | nucleus | 29.26 | 45.27 |
| KRG96274 | Soybean | endoplasmic reticulum, extracellular, vacuole | 48.55 | 43.64 |
| KRH32866 | Soybean | nucleus | 45.66 | 43.43 |
| CDY05192 | Canola | nucleus | 24.44 | 42.46 |
| AT5G06510.2 | Thale cress | nucleus | 34.73 | 40.15 |
| CDY18809 | Canola | nucleus | 34.41 | 39.05 |
| CDX98930 | Canola | nucleus | 33.12 | 38.58 |
| Bra040529.1-P | Field mustard | nucleus | 34.41 | 38.08 |
| Bra009200.1-P | Field mustard | nucleus | 32.48 | 37.83 |
| CDX70098 | Canola | nucleus | 32.48 | 37.83 |
| CDX74133 | Canola | nucleus | 33.12 | 36.65 |
| Bra001164.1-P | Field mustard | nucleus | 33.12 | 36.65 |
| CDY14662 | Canola | nucleus | 33.12 | 36.65 |
| GSMUA_Achr4P31420_001 | Banana | mitochondrion, nucleus | 36.66 | 33.83 |
| GSMUA_Achr4P28390_001 | Banana | nucleus | 34.41 | 33.23 |
| HORVU5Hr1G007890.1 | Barley | nucleus | 36.33 | 33.14 |
| AT3G05690.2 | Thale cress | mitochondrion | 35.37 | 33.13 |
| TraesCS5B01G028500.1 | Wheat | nucleus | 36.01 | 33.04 |
| Os12t0618600-01 | Rice | nucleus | 32.8 | 32.8 |
| TraesCS5A01G029900.1 | Wheat | nucleus | 35.69 | 32.55 |
| TraesCS5A01G373500.1 | Wheat | nucleus | 34.08 | 32.52 |
| TraesCS5B01G375500.1 | Wheat | nucleus | 33.76 | 32.51 |
| TraesCS5D01G037800.1 | Wheat | nucleus | 35.69 | 32.46 |
| Zm00001d033215_P001 | Maize | nucleus | 33.44 | 32.3 |
| TraesCS5D01G383000.1 | Wheat | nucleus | 33.12 | 31.69 |
| KXG37939 | Sorghum | nucleus | 34.41 | 31.01 |
| Zm00001d031092_P001 | Maize | nucleus | 32.8 | 30.91 |
| Zm00001d013676_P002 | Maize | nucleus | 33.76 | 30.79 |
| Solyc02g069860.2.1 | Tomato | nucleus | 20.26 | 30.29 |
| GSMUA_Achr5P02590_001 | Banana | nucleus | 31.51 | 30.25 |
| Os03t0647600-01 | Rice | nucleus | 33.44 | 29.38 |
| HORVU5Hr1G092700.5 | Barley | nucleus | 33.44 | 26.67 |
| Solyc10g079150.1.1 | Tomato | nucleus | 18.65 | 26.48 |
| Zm00001d007882_P001 | Maize | nucleus | 24.12 | 25.51 |
| Os07t0158500-00 | Rice | nucleus | 30.87 | 25.33 |
| Solyc12g009050.1.1 | Tomato | nucleus | 20.58 | 25.3 |
| OQU79642 | Sorghum | plastid | 33.44 | 24.82 |
| Solyc01g087240.2.1 | Tomato | nucleus | 23.79 | 24.42 |
| Solyc03g121940.2.1 | Tomato | nucleus | 18.01 | 23.24 |
| OQU88458 | Sorghum | nucleus | 23.15 | 22.29 |
| Solyc01g008490.2.1 | Tomato | nucleus | 21.86 | 21.79 |
| Solyc11g065700.1.1 | Tomato | nucleus | 20.58 | 21.33 |
| Solyc08g062210.2.1 | Tomato | nucleus | 21.54 | 20.62 |
Protein Annotations
| EnsemblPlants:Solyc01g006930.2.1 | EnsemblPlantsGene:Solyc01g006930.2 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001289 | InterPro:NFYA |
| PANTHER:PTHR12632 | PANTHER:PTHR12632:SF7 | PFAM:PF02045 | PFscan:PS51152 | PRINTS:PR00616 | SEG:seg |
| SMART:SM00521 | UniParc:UPI00027626E1 | UniProt:K4ASQ9 | MapMan:15.5.51.1 | : | : |
Description
No Description!
Coordinates
chr1:+:1506539..1511917
Molecular Weight (calculated)
34244.7 Da
IEP (calculated)
10.055
GRAVY (calculated)
-0.521
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: MNTTIFSKGN ERVVQNQSVG TLCSAPWWSN GFMSQSVAYA EPFGQLKSAS VEQQPKGNAT EFTISSGDCK SSANGQKLPN IQAASSVRAA NMDYRGHFEL
101: GFGQSLIYAK HPYGEQCIGL FSAYAPQLSG RIMLPLNLAS DEGPIFVNAK QYHGILRRRK TRAKEMEKKA LKPRKPYLHL SRHLHALRRP RGCGGRFLNT
201: RNMNGTMKAG KTNNMFKTGD VQNFYPTGSQ NSEVLQSDSS NLSSPKETSG SRFFDSSGVA NMYSSDNLDP FLFQNLRPPV QAIPDMMNTG HGIFVSGKWV
301: CTADSCCNLK V
101: GFGQSLIYAK HPYGEQCIGL FSAYAPQLSG RIMLPLNLAS DEGPIFVNAK QYHGILRRRK TRAKEMEKKA LKPRKPYLHL SRHLHALRRP RGCGGRFLNT
201: RNMNGTMKAG KTNNMFKTGD VQNFYPTGSQ NSEVLQSDSS NLSSPKETSG SRFFDSSGVA NMYSSDNLDP FLFQNLRPPV QAIPDMMNTG HGIFVSGKWV
301: CTADSCCNLK V
001: MQTEELLSPP QTPWWNAFGS QPLTTESLSG EASDSFTGVK AVTTEAEQGV VDKQTSTTLF TFSPGGEKSS RDVPKPHVAF AMQSACFEFG FAQPMMYTKH
101: PHVEQYYGVV SAYGSQRSSG RVMIPLKMET EEDGTIYVNS KQYHGIIRRR QSRAKAEKLS RCRKPYMHHS RHLHAMRRPR GSGGRFLNTK TADAAKQSKP
201: SNSQSSEVFH PENETINSSR EANESNLSDS AVTSMDYFLS SSAYSPGGMV MPIKWNAAAM DIGCCKLNI
101: PHVEQYYGVV SAYGSQRSSG RVMIPLKMET EEDGTIYVNS KQYHGIIRRR QSRAKAEKLS RCRKPYMHHS RHLHAMRRPR GSGGRFLNTK TADAAKQSKP
201: SNSQSSEVFH PENETINSSR EANESNLSDS AVTSMDYFLS SSAYSPGGMV MPIKWNAAAM DIGCCKLNI
Arabidopsis Description
NFYA10NF-YA10 [Source:UniProtKB/TrEMBL;Acc:A0A178URE3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.