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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX98930 Canola nucleus 73.23 73.78
Bra009200.1-P Field mustard nucleus 70.26 70.79
CDX70098 Canola nucleus 70.26 70.79
AT3G05690.2 Thale cress mitochondrion 66.91 54.22
VIT_08s0032g01190.t01 Wine grape nucleus 51.67 42.38
KRH68018 Soybean nucleus 49.81 40.85
KRG96274 Soybean endoplasmic reticulum, extracellular, vacuole 50.56 39.31
KRH72156 Soybean nucleus 48.7 39.1
GSMUA_Achr7P07860_001 Banana nucleus 29.0 38.81
KRH32866 Soybean nucleus 46.84 38.53
Solyc10g081840.1.1 Tomato nucleus 21.19 37.01
PGSC0003DMT400072322 Potato nucleus 26.02 35.71
Solyc01g006930.2.1 Tomato nucleus 40.15 34.73
PGSC0003DMT400055061 Potato nucleus 39.03 33.76
Os12t0618600-01 Rice nucleus 36.06 31.19
GSMUA_Achr5P02590_001 Banana nucleus 36.8 30.56
TraesCS5A01G373500.1 Wheat nucleus 36.8 30.37
TraesCS5D01G383000.1 Wheat nucleus 36.06 29.85
TraesCS5B01G028500.1 Wheat nucleus 37.55 29.79
TraesCS5B01G375500.1 Wheat nucleus 35.69 29.72
TraesCS5D01G037800.1 Wheat nucleus 37.17 29.24
GSMUA_Achr4P28390_001 Banana nucleus 34.94 29.19
GSMUA_Achr4P31420_001 Banana mitochondrion, nucleus 36.43 29.08
TraesCS5A01G029900.1 Wheat nucleus 36.8 29.03
HORVU5Hr1G007890.1 Barley nucleus 36.43 28.74
Zm00001d033215_P001 Maize nucleus 33.09 27.64
Zm00001d031092_P001 Maize nucleus 33.83 27.58
KXG37939 Sorghum nucleus 34.94 27.25
Zm00001d013676_P002 Maize nucleus 34.2 26.98
AT1G30500.2 Thale cress nucleus 18.96 26.84
AT2G34720.1 Thale cress nucleus 19.33 26.26
Os03t0647600-01 Rice nucleus 33.83 25.71
HORVU5Hr1G092700.5 Barley nucleus 36.43 25.13
Os07t0158500-00 Rice nucleus 34.94 24.8
AT5G12840.3 Thale cress nucleus 24.16 23.9
Zm00001d007882_P001 Maize nucleus 25.28 23.13
OQU79642 Sorghum plastid 35.32 22.67
OQU88458 Sorghum nucleus 26.02 21.67
AT1G54160.1 Thale cress nucleus 24.54 21.43
AT3G20910.1 Thale cress nucleus 23.42 20.79
AT1G72830.2 Thale cress nucleus 25.65 20.23
AT1G17590.3 Thale cress nucleus 23.79 19.51
AT3G14020.1 Thale cress nucleus 21.93 19.16
Protein Annotations
MapMan:15.5.51.1EntrezGene:830539UniProt:A0A178URE3ProteinID:AED91025.1ProteinID:AED91027.1ProteinID:ANM68856.1
ProteinID:ANM68857.1ArrayExpress:AT5G06510EnsemblPlantsGene:AT5G06510RefSeq:AT5G06510TAIR:AT5G06510RefSeq:AT5G06510-TAIR-G
EnsemblPlants:AT5G06510.2TAIR:AT5G06510.2EMBL:AY084643Unigene:At.32843ProteinID:BAB11400.1InterPro:CCAAT-binding_factor_CS
GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016602InterPro:IPR001289
Symbol:NF-YA10InterPro:NFYARefSeq:NP_001330575.1RefSeq:NP_001330576.1RefSeq:NP_196269.1RefSeq:NP_974741.1
ProteinID:OAO96050.1PFAM:PF02045PO:PO:0000293PO:PO:0001078PO:PO:0001081PO:PO:0004507
PO:PO:0009009PO:PO:0009010PO:PO:0009015PO:PO:0009047PO:PO:0025022ScanProsite:PS00686
PFscan:PS51152PANTHER:PTHR12632PANTHER:PTHR12632:SF7UniProt:Q8LFU0SMART:SM00521UniParc:UPI00000A2D91
Description
NFYA10NF-YA10 [Source:UniProtKB/TrEMBL;Acc:A0A178URE3]
Coordinates
chr5:+:1985102..1987044
Molecular Weight (calculated)
29796.0 Da
IEP (calculated)
8.847
GRAVY (calculated)
-0.641
Length
269 amino acids
Sequence
(BLAST)
001: MQTEELLSPP QTPWWNAFGS QPLTTESLSG EASDSFTGVK AVTTEAEQGV VDKQTSTTLF TFSPGGEKSS RDVPKPHVAF AMQSACFEFG FAQPMMYTKH
101: PHVEQYYGVV SAYGSQRSSG RVMIPLKMET EEDGTIYVNS KQYHGIIRRR QSRAKAEKLS RCRKPYMHHS RHLHAMRRPR GSGGRFLNTK TADAAKQSKP
201: SNSQSSEVFH PENETINSSR EANESNLSDS AVTSMDYFLS SSAYSPGGMV MPIKWNAAAM DIGCCKLNI
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.