Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX98930 | Canola | nucleus | 73.23 | 73.78 |
Bra009200.1-P | Field mustard | nucleus | 70.26 | 70.79 |
CDX70098 | Canola | nucleus | 70.26 | 70.79 |
AT3G05690.2 | Thale cress | mitochondrion | 66.91 | 54.22 |
VIT_08s0032g01190.t01 | Wine grape | nucleus | 51.67 | 42.38 |
KRH68018 | Soybean | nucleus | 49.81 | 40.85 |
KRG96274 | Soybean | endoplasmic reticulum, extracellular, vacuole | 50.56 | 39.31 |
KRH72156 | Soybean | nucleus | 48.7 | 39.1 |
GSMUA_Achr7P07860_001 | Banana | nucleus | 29.0 | 38.81 |
KRH32866 | Soybean | nucleus | 46.84 | 38.53 |
Solyc10g081840.1.1 | Tomato | nucleus | 21.19 | 37.01 |
PGSC0003DMT400072322 | Potato | nucleus | 26.02 | 35.71 |
Solyc01g006930.2.1 | Tomato | nucleus | 40.15 | 34.73 |
PGSC0003DMT400055061 | Potato | nucleus | 39.03 | 33.76 |
Os12t0618600-01 | Rice | nucleus | 36.06 | 31.19 |
GSMUA_Achr5P02590_001 | Banana | nucleus | 36.8 | 30.56 |
TraesCS5A01G373500.1 | Wheat | nucleus | 36.8 | 30.37 |
TraesCS5D01G383000.1 | Wheat | nucleus | 36.06 | 29.85 |
TraesCS5B01G028500.1 | Wheat | nucleus | 37.55 | 29.79 |
TraesCS5B01G375500.1 | Wheat | nucleus | 35.69 | 29.72 |
TraesCS5D01G037800.1 | Wheat | nucleus | 37.17 | 29.24 |
GSMUA_Achr4P28390_001 | Banana | nucleus | 34.94 | 29.19 |
GSMUA_Achr4P31420_001 | Banana | mitochondrion, nucleus | 36.43 | 29.08 |
TraesCS5A01G029900.1 | Wheat | nucleus | 36.8 | 29.03 |
HORVU5Hr1G007890.1 | Barley | nucleus | 36.43 | 28.74 |
Zm00001d033215_P001 | Maize | nucleus | 33.09 | 27.64 |
Zm00001d031092_P001 | Maize | nucleus | 33.83 | 27.58 |
KXG37939 | Sorghum | nucleus | 34.94 | 27.25 |
Zm00001d013676_P002 | Maize | nucleus | 34.2 | 26.98 |
AT1G30500.2 | Thale cress | nucleus | 18.96 | 26.84 |
AT2G34720.1 | Thale cress | nucleus | 19.33 | 26.26 |
Os03t0647600-01 | Rice | nucleus | 33.83 | 25.71 |
HORVU5Hr1G092700.5 | Barley | nucleus | 36.43 | 25.13 |
Os07t0158500-00 | Rice | nucleus | 34.94 | 24.8 |
AT5G12840.3 | Thale cress | nucleus | 24.16 | 23.9 |
Zm00001d007882_P001 | Maize | nucleus | 25.28 | 23.13 |
OQU79642 | Sorghum | plastid | 35.32 | 22.67 |
OQU88458 | Sorghum | nucleus | 26.02 | 21.67 |
AT1G54160.1 | Thale cress | nucleus | 24.54 | 21.43 |
AT3G20910.1 | Thale cress | nucleus | 23.42 | 20.79 |
AT1G72830.2 | Thale cress | nucleus | 25.65 | 20.23 |
AT1G17590.3 | Thale cress | nucleus | 23.79 | 19.51 |
AT3G14020.1 | Thale cress | nucleus | 21.93 | 19.16 |
Protein Annotations
MapMan:15.5.51.1 | EntrezGene:830539 | UniProt:A0A178URE3 | ProteinID:AED91025.1 | ProteinID:AED91027.1 | ProteinID:ANM68856.1 |
ProteinID:ANM68857.1 | ArrayExpress:AT5G06510 | EnsemblPlantsGene:AT5G06510 | RefSeq:AT5G06510 | TAIR:AT5G06510 | RefSeq:AT5G06510-TAIR-G |
EnsemblPlants:AT5G06510.2 | TAIR:AT5G06510.2 | EMBL:AY084643 | Unigene:At.32843 | ProteinID:BAB11400.1 | InterPro:CCAAT-binding_factor_CS |
GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016602 | InterPro:IPR001289 |
Symbol:NF-YA10 | InterPro:NFYA | RefSeq:NP_001330575.1 | RefSeq:NP_001330576.1 | RefSeq:NP_196269.1 | RefSeq:NP_974741.1 |
ProteinID:OAO96050.1 | PFAM:PF02045 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0004507 |
PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009015 | PO:PO:0009047 | PO:PO:0025022 | ScanProsite:PS00686 |
PFscan:PS51152 | PANTHER:PTHR12632 | PANTHER:PTHR12632:SF7 | UniProt:Q8LFU0 | SMART:SM00521 | UniParc:UPI00000A2D91 |
Description
NFYA10NF-YA10 [Source:UniProtKB/TrEMBL;Acc:A0A178URE3]
Coordinates
chr5:+:1985102..1987044
Molecular Weight (calculated)
29796.0 Da
IEP (calculated)
8.847
GRAVY (calculated)
-0.641
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MQTEELLSPP QTPWWNAFGS QPLTTESLSG EASDSFTGVK AVTTEAEQGV VDKQTSTTLF TFSPGGEKSS RDVPKPHVAF AMQSACFEFG FAQPMMYTKH
101: PHVEQYYGVV SAYGSQRSSG RVMIPLKMET EEDGTIYVNS KQYHGIIRRR QSRAKAEKLS RCRKPYMHHS RHLHAMRRPR GSGGRFLNTK TADAAKQSKP
201: SNSQSSEVFH PENETINSSR EANESNLSDS AVTSMDYFLS SSAYSPGGMV MPIKWNAAAM DIGCCKLNI
101: PHVEQYYGVV SAYGSQRSSG RVMIPLKMET EEDGTIYVNS KQYHGIIRRR QSRAKAEKLS RCRKPYMHHS RHLHAMRRPR GSGGRFLNTK TADAAKQSKP
201: SNSQSSEVFH PENETINSSR EANESNLSDS AVTSMDYFLS SSAYSPGGMV MPIKWNAAAM DIGCCKLNI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.