Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX70098 | Canola | nucleus | 90.64 | 90.64 |
| AT5G06510.2 | Thale cress | nucleus | 73.78 | 73.23 |
| CDY05192 | Canola | nucleus | 44.57 | 66.48 |
| CDY18809 | Canola | nucleus | 59.93 | 58.39 |
| CDX74133 | Canola | nucleus | 61.42 | 58.36 |
| CDY14662 | Canola | nucleus | 61.42 | 58.36 |
| KRH68018 | Soybean | nucleus | 49.06 | 39.94 |
| VIT_08s0032g01190.t01 | Wine grape | nucleus | 47.19 | 38.41 |
| KRH72156 | Soybean | nucleus | 46.82 | 37.31 |
| KRH32866 | Soybean | nucleus | 45.69 | 37.31 |
| KRG96274 | Soybean | endoplasmic reticulum, extracellular, vacuole | 48.31 | 37.28 |
| Solyc10g081840.1.1 | Tomato | nucleus | 20.97 | 36.36 |
| GSMUA_Achr7P07860_001 | Banana | nucleus | 27.34 | 36.32 |
| PGSC0003DMT400072322 | Potato | nucleus | 25.09 | 34.18 |
| Solyc01g006930.2.1 | Tomato | nucleus | 38.58 | 33.12 |
| PGSC0003DMT400055061 | Potato | nucleus | 37.45 | 32.15 |
| CDY37330 | Canola | nucleus | 19.48 | 28.89 |
| CDY02298 | Canola | nucleus | 19.48 | 28.42 |
| CDX78492 | Canola | nucleus | 21.72 | 28.29 |
| CDY09571 | Canola | nucleus | 19.1 | 27.87 |
| GSMUA_Achr4P28390_001 | Banana | nucleus | 32.96 | 27.33 |
| GSMUA_Achr5P02590_001 | Banana | nucleus | 32.96 | 27.16 |
| GSMUA_Achr4P31420_001 | Banana | mitochondrion, nucleus | 33.71 | 26.71 |
| CDX84285 | Canola | nucleus | 19.48 | 26.53 |
| CDX91161 | Canola | nucleus | 21.72 | 26.48 |
| CDY31636 | Canola | nucleus | 19.48 | 26.4 |
| TraesCS5A01G373500.1 | Wheat | nucleus | 32.21 | 26.38 |
| CDX85686 | Canola | nucleus | 23.22 | 26.27 |
| Os12t0618600-01 | Rice | nucleus | 30.34 | 26.05 |
| TraesCS5B01G028500.1 | Wheat | nucleus | 32.96 | 25.96 |
| TraesCS5D01G383000.1 | Wheat | nucleus | 31.46 | 25.85 |
| TraesCS5B01G375500.1 | Wheat | nucleus | 31.09 | 25.7 |
| CDY69800 | Canola | nucleus | 22.1 | 25.54 |
| TraesCS5A01G029900.1 | Wheat | nucleus | 32.58 | 25.51 |
| TraesCS5D01G037800.1 | Wheat | nucleus | 32.58 | 25.44 |
| HORVU5Hr1G007890.1 | Barley | nucleus | 32.21 | 25.22 |
| Zm00001d033215_P001 | Maize | nucleus | 30.34 | 25.16 |
| Zm00001d031092_P001 | Maize | nucleus | 31.09 | 25.15 |
| CDY26138 | Canola | nucleus | 22.1 | 25.11 |
| CDY02477 | Canola | nucleus | 21.35 | 25.0 |
| CDY56623 | Canola | nucleus | 21.72 | 24.79 |
| KXG37939 | Sorghum | nucleus | 31.84 | 24.64 |
| Zm00001d013676_P002 | Maize | nucleus | 31.09 | 24.34 |
| CDX70480 | Canola | nucleus | 23.6 | 24.32 |
| CDY53967 | Canola | nucleus | 25.09 | 23.59 |
| CDX97206 | Canola | nucleus | 25.09 | 23.51 |
| Os03t0647600-01 | Rice | nucleus | 30.71 | 23.16 |
| Zm00001d007882_P001 | Maize | nucleus | 25.09 | 22.79 |
| Os07t0158500-00 | Rice | nucleus | 32.21 | 22.69 |
| CDY51397 | Canola | nucleus | 23.6 | 22.11 |
| CDX72947 | Canola | nucleus, plasma membrane, plastid | 19.85 | 22.08 |
| CDX82223 | Canola | nucleus | 22.85 | 21.79 |
| HORVU5Hr1G092700.5 | Barley | nucleus | 31.46 | 21.54 |
| OQU88458 | Sorghum | nucleus | 25.09 | 20.74 |
| OQU79642 | Sorghum | plastid | 32.21 | 20.53 |
| CDX96435 | Canola | nucleus | 24.72 | 20.5 |
| CDY33084 | Canola | nucleus | 22.85 | 20.4 |
| CDY06393 | Canola | nucleus | 22.47 | 20.13 |
| CDY48025 | Canola | nucleus | 21.72 | 19.93 |
| CDY39091 | Canola | nucleus | 22.85 | 19.81 |
| CDY33253 | Canola | nucleus | 22.47 | 19.48 |
| CDY32398 | Canola | nucleus | 21.72 | 19.46 |
| CDX72950 | Canola | nucleus | 24.72 | 19.24 |
| CDX82133 | Canola | nucleus | 22.85 | 19.12 |
| CDY19591 | Canola | nucleus | 20.97 | 19.05 |
| CDY21741 | Canola | nucleus | 21.35 | 17.7 |
| CDY30854 | Canola | nucleus | 9.36 | 17.12 |
| CDY70458 | Canola | nucleus | 22.85 | 15.06 |
| CDX81837 | Canola | nucleus | 14.98 | 13.42 |
Protein Annotations
| MapMan:15.5.51.1 | ProteinID:AHI94939.1 | EnsemblPlants:CDX98930 | ProteinID:CDX98930 | ProteinID:CDX98930.1 | GO:GO:0003674 |
| GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00107041001 | InterPro:IPR001289 | InterPro:NFYA | PFAM:PF02045 | PRINTS:PR00616 |
| PFscan:PS51152 | PANTHER:PTHR12632 | PANTHER:PTHR12632:SF7 | SMART:SM00521 | UniParc:UPI0003EFD105 | GO:W6D6S0 |
| UniProt:W6D6S0 | : | : | : | : | : |
Description
BnaC09g49050DBnaC09g49050D protein [Source:UniProtKB/TrEMBL;Acc:W6D6S0]
Coordinates
chrLK031907:+:664400..665464
Molecular Weight (calculated)
29626.3 Da
IEP (calculated)
9.764
GRAVY (calculated)
-0.578
Length
267 amino acids
Sequence
(BLAST)
(BLAST)
001: MQTEYCKERG ELFSPPQASC LWNIAFGPPA LTTESLSSVS FAGVKVVTPE TESEQGGGKS SRDHVSKPHV AFSMQSSCFE FGFAQPTIYT KHPDHVEQYY
101: GVVSGYGSQI SPGRVMLPLK METEEDGTIY VNSKQYHGII RRRQSRAKAV LKNKISSCRK QPYMHHSRHL HAMRRPRGSG GRFLNTKKAD ADLQSKPSNP
201: QISEVFHPKN RTMTSSMETY GPNVSSSNVT SMNHFLSSSV HSIGGNMVMP SKWIAEAMDI GCCKLKT
101: GVVSGYGSQI SPGRVMLPLK METEEDGTIY VNSKQYHGII RRRQSRAKAV LKNKISSCRK QPYMHHSRHL HAMRRPRGSG GRFLNTKKAD ADLQSKPSNP
201: QISEVFHPKN RTMTSSMETY GPNVSSSNVT SMNHFLSSSV HSIGGNMVMP SKWIAEAMDI GCCKLKT
001: MQTEELLSPP QTPWWNAFGS QPLTTESLSG EASDSFTGVK AVTTEAEQGV VDKQTSTTLF TFSPGGEKSS RDVPKPHVAF AMQSACFEFG FAQPMMYTKH
101: PHVEQYYGVV SAYGSQRSSG RVMIPLKMET EEDGTIYVNS KQYHGIIRRR QSRAKAEKLS RCRKPYMHHS RHLHAMRRPR GSGGRFLNTK TADAAKQSKP
201: SNSQSSEVFH PENETINSSR EANESNLSDS AVTSMDYFLS SSAYSPGGMV MPIKWNAAAM DIGCCKLNI
101: PHVEQYYGVV SAYGSQRSSG RVMIPLKMET EEDGTIYVNS KQYHGIIRRR QSRAKAEKLS RCRKPYMHHS RHLHAMRRPR GSGGRFLNTK TADAAKQSKP
201: SNSQSSEVFH PENETINSSR EANESNLSDS AVTSMDYFLS SSAYSPGGMV MPIKWNAAAM DIGCCKLNI
Arabidopsis Description
NFYA10NF-YA10 [Source:UniProtKB/TrEMBL;Acc:A0A178URE3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.