Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031242.1-P | Field mustard | nucleus | 94.63 | 95.59 |
| CDY19591 | Canola | nucleus | 94.3 | 95.58 |
| CDX82223 | Canola | nucleus | 81.54 | 86.79 |
| CDY32398 | Canola | nucleus | 83.89 | 83.89 |
| CDY37330 | Canola | nucleus | 47.32 | 78.33 |
| AT3G20910.1 | Thale cress | nucleus | 78.52 | 77.23 |
| CDX78492 | Canola | nucleus | 30.54 | 44.39 |
| KRH14162 | Soybean | nucleus | 45.3 | 43.97 |
| KRH73967 | Soybean | nucleus | 44.63 | 43.32 |
| KRG98391 | Soybean | nucleus | 48.66 | 42.9 |
| KRH46473 | Soybean | nucleus | 47.65 | 42.26 |
| CDX85686 | Canola | nucleus | 33.22 | 41.95 |
| VIT_06s0004g02270.t01 | Wine grape | nucleus | 42.28 | 41.18 |
| CDX91161 | Canola | nucleus | 29.19 | 39.73 |
| CDX97206 | Canola | nucleus | 37.92 | 39.65 |
| CDY53967 | Canola | nucleus | 37.25 | 39.08 |
| CDX70480 | Canola | nucleus | 33.89 | 39.0 |
| PGSC0003DMT400018959 | Potato | nucleus | 36.91 | 36.67 |
| Solyc11g065700.1.1 | Tomato | nucleus | 36.58 | 36.33 |
| PGSC0003DMT400027785 | Potato | nucleus | 37.58 | 36.13 |
| Solyc01g008490.2.1 | Tomato | nucleus | 37.25 | 35.58 |
| Os03t0696300-01 | Rice | nucleus | 30.2 | 34.62 |
| TraesCS4A01G277300.1 | Wheat | nucleus | 30.2 | 33.83 |
| Zm00001d033602_P002 | Maize | nucleus | 29.53 | 33.33 |
| CDY02298 | Canola | nucleus | 20.47 | 33.33 |
| TraesCS4D01G033700.1 | Wheat | nucleus | 29.53 | 33.08 |
| CDY09571 | Canola | nucleus | 19.8 | 32.24 |
| KXG37797 | Sorghum | nucleus | 28.52 | 31.84 |
| CDX84285 | Canola | nucleus | 20.81 | 31.63 |
| CDY31636 | Canola | nucleus | 20.47 | 30.96 |
| CDY56623 | Canola | nucleus | 23.49 | 29.91 |
| CDY02477 | Canola | nucleus | 22.82 | 29.82 |
| CDY26138 | Canola | nucleus | 23.49 | 29.79 |
| CDY69800 | Canola | nucleus | 22.82 | 29.44 |
| CDY05192 | Canola | nucleus | 17.11 | 28.49 |
| GSMUA_Achr3P29730_001 | Banana | nucleus | 30.2 | 28.12 |
| GSMUA_Achr4P03600_001 | Banana | nucleus | 26.85 | 26.85 |
| CDY51397 | Canola | nucleus | 25.5 | 26.67 |
| CDX82133 | Canola | nucleus | 27.52 | 25.71 |
| CDY48025 | Canola | nucleus | 24.5 | 25.09 |
| CDX72947 | Canola | nucleus, plasma membrane, plastid | 20.13 | 25.0 |
| GSMUA_Achr4P11090_001 | Banana | vacuole | 30.54 | 24.86 |
| CDY33084 | Canola | nucleus | 24.83 | 24.75 |
| CDY33253 | Canola | nucleus | 24.5 | 23.7 |
| CDY39091 | Canola | nucleus | 24.5 | 23.7 |
| CDY21741 | Canola | nucleus | 25.5 | 23.6 |
| CDX96435 | Canola | nucleus | 25.5 | 23.6 |
| CDX70098 | Canola | nucleus | 20.47 | 22.85 |
| CDX72950 | Canola | nucleus | 26.17 | 22.74 |
| CDX98930 | Canola | nucleus | 20.13 | 22.47 |
| CDY18809 | Canola | nucleus | 20.13 | 21.9 |
| CDY14662 | Canola | nucleus | 20.13 | 21.35 |
| CDX74133 | Canola | nucleus | 20.13 | 21.35 |
| CDY70458 | Canola | nucleus | 26.17 | 19.26 |
| CDY30854 | Canola | nucleus | 9.4 | 19.18 |
| CDX81837 | Canola | nucleus | 16.78 | 16.78 |
Protein Annotations
| MapMan:15.5.51.1 | GO:A0A078F3V2 | InterPro:CCAAT-binding_factor_CS | EnsemblPlants:CDY06393 | ProteinID:CDY06393 | ProteinID:CDY06393.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016602 | EnsemblPlantsGene:GSBRNA2T00122364001 | InterPro:IPR001289 |
| InterPro:NFYA | PFAM:PF02045 | PRINTS:PR00616 | ScanProsite:PS00686 | PFscan:PS51152 | PANTHER:PTHR12632 |
| PANTHER:PTHR12632:SF14 | SMART:SM00521 | UniParc:UPI0004EE3492 | SEG:seg | : | : |
Description
BnaC05g31370D
Coordinates
chrLK031969:+:307365..309541
Molecular Weight (calculated)
32913.9 Da
IEP (calculated)
9.006
GRAVY (calculated)
-1.107
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: MHSKKPDGGN QIVSEVVHHH TSSSSINSLN PWQRAAAACN ASSLVEEAGD KSIALENQNN WESTNGSKSP SNRDDNGNKE SPQVTTSPQE SAGDYSEKSQ
101: ELVHVGVTGP PHPQLVSHTV GWASSNPYQD PYYAGMMGAY PMAYVPYGGM PHSRMPLPPE VAQEPVYVNA KQYQAILRRR QARAKAELEM KLIKSRKPYL
201: HESRHQHAMR RPRGTGGRFA KKTNTEASQP KPGEKNNATQ SPTSSHSDQP EAWNDECRKQ SEEMQSSASK RREEADCSGQ QWNSISSNHT SQARLAIK
101: ELVHVGVTGP PHPQLVSHTV GWASSNPYQD PYYAGMMGAY PMAYVPYGGM PHSRMPLPPE VAQEPVYVNA KQYQAILRRR QARAKAELEM KLIKSRKPYL
201: HESRHQHAMR RPRGTGGRFA KKTNTEASQP KPGEKNNATQ SPTSSHSDQP EAWNDECRKQ SEEMQSSASK RREEADCSGQ QWNSISSNHT SQARLAIK
001: MGIEDMHSKS DSGGNKVDSE VHGTVSSSIN SLNPWHRAAA ACNANSSVEA GDKSSKSIAL ALESNGSKSP SNRDNTVNKE SQVTTSPQSA GDYSDKNQES
101: LHHGITQPPP HPQLVGHTVG WASSNPYQDP YYAGVMGAYG HHPLGFVPYG GMPHSRMPLP PEMAQEPVFV NAKQYQAILR RRQARAKAEL EKKLIKSRKP
201: YLHESRHQHA MRRPRGTGGR FAKKTNTEAS KRKAEEKSNG HVTQSPSSSN SDQGEAWNGD YRTPQGDEMQ SSAYKRREEG ECSGQQWNSL SSNHPSQARL
301: AIK
101: LHHGITQPPP HPQLVGHTVG WASSNPYQDP YYAGVMGAYG HHPLGFVPYG GMPHSRMPLP PEMAQEPVFV NAKQYQAILR RRQARAKAEL EKKLIKSRKP
201: YLHESRHQHA MRRPRGTGGR FAKKTNTEAS KRKAEEKSNG HVTQSPSSSN SDQGEAWNGD YRTPQGDEMQ SSAYKRREEG ECSGQQWNSL SSNHPSQARL
301: AIK
Arabidopsis Description
NFYA9Nuclear transcription factor Y subunit A-9 [Source:UniProtKB/Swiss-Prot;Acc:Q945M9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.