Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030899.1-P | Field mustard | nucleus | 93.86 | 85.26 |
| CDY56623 | Canola | nucleus | 87.28 | 85.04 |
| CDY69800 | Canola | nucleus | 70.61 | 69.7 |
| CDY26138 | Canola | nucleus | 70.18 | 68.09 |
| CDY51397 | Canola | nucleus | 78.95 | 63.16 |
| CDY33084 | Canola | nucleus | 79.39 | 60.54 |
| Zm00001d029489_P002 | Maize | nucleus | 23.68 | 60.0 |
| AT1G54160.1 | Thale cress | nucleus | 77.63 | 57.47 |
| CDY39091 | Canola | nucleus | 53.95 | 39.94 |
| CDY33253 | Canola | nucleus | 52.63 | 38.96 |
| CDY09571 | Canola | nucleus | 27.19 | 33.88 |
| CDY02298 | Canola | nucleus | 26.75 | 33.33 |
| EER92762 | Sorghum | nucleus | 35.96 | 33.06 |
| Os03t0174900-01 | Rice | vacuole | 29.82 | 32.54 |
| KRH06120 | Soybean | nucleus | 44.3 | 31.66 |
| TraesCS4D01G289600.1 | Wheat | nucleus | 33.33 | 31.41 |
| CDY48025 | Canola | nucleus | 39.91 | 31.27 |
| TraesCS4B01G290400.1 | Wheat | nucleus | 33.33 | 31.15 |
| CDX82133 | Canola | nucleus | 42.11 | 30.09 |
| KRH47551 | Soybean | nucleus | 45.61 | 29.89 |
| CDY05192 | Canola | nucleus | 23.25 | 29.61 |
| PGSC0003DMT400006358 | Potato | nucleus | 36.4 | 29.33 |
| CDX84285 | Canola | nucleus | 25.0 | 29.08 |
| CDY31636 | Canola | nucleus | 25.0 | 28.93 |
| GSMUA_Achr2P21730_001 | Banana | nucleus | 36.84 | 28.87 |
| GSMUA_Achr8P16700_001 | Banana | nucleus | 36.4 | 28.82 |
| CDX72947 | Canola | nucleus, plasma membrane, plastid | 30.26 | 28.75 |
| HORVU2Hr1G032130.4 | Barley | nucleus | 37.72 | 28.67 |
| KRH10071 | Soybean | nucleus | 37.28 | 28.62 |
| CDX78492 | Canola | nucleus | 25.44 | 28.29 |
| Os07t0608200-01 | Rice | nucleus | 37.72 | 28.29 |
| CDY21741 | Canola | nucleus | 39.91 | 28.26 |
| CDX96435 | Canola | nucleus | 39.47 | 27.95 |
| CDY37330 | Canola | nucleus | 21.93 | 27.78 |
| TraesCS2A01G172500.1 | Wheat | nucleus | 36.4 | 27.39 |
| TraesCS2B01G198700.1 | Wheat | nucleus | 35.96 | 27.33 |
| EER99688 | Sorghum | nucleus | 35.96 | 27.24 |
| Zm00001d022109_P003 | Maize | nucleus | 35.53 | 26.91 |
| CDX72950 | Canola | nucleus | 40.35 | 26.82 |
| Solyc03g121940.2.1 | Tomato | nucleus | 28.07 | 26.56 |
| Zm00001d006835_P002 | Maize | nucleus | 34.65 | 26.33 |
| HORVU4Hr1G075830.4 | Barley | nucleus | 33.33 | 26.21 |
| GSMUA_AchrUn_... | Banana | nucleus | 35.53 | 25.96 |
| Os03t0411100-01 | Rice | nucleus | 35.96 | 25.87 |
| CDX85686 | Canola | nucleus | 26.75 | 25.85 |
| TraesCS6D01G315300.1 | Wheat | nucleus | 28.51 | 25.59 |
| Os02t0776400-01 | Rice | nucleus | 30.26 | 25.56 |
| TraesCS6B01G366100.2 | Wheat | nucleus | 28.51 | 25.49 |
| TraesCS6A01G335400.1 | Wheat | nucleus | 28.07 | 25.2 |
| GSMUA_Achr8P30700_001 | Banana | nucleus | 34.65 | 24.92 |
| EER94699 | Sorghum | nucleus | 33.77 | 24.92 |
| Zm00001d027874_P004 | Maize | nucleus | 28.51 | 24.71 |
| CDX91161 | Canola | nucleus | 23.68 | 24.66 |
| TraesCS2D01G179600.2 | Wheat | nucleus | 35.96 | 24.48 |
| OQU85816 | Sorghum | nucleus | 32.46 | 24.34 |
| CDX70480 | Canola | nucleus | 27.19 | 23.94 |
| Zm00001d018255_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 30.7 | 23.89 |
| HORVU6Hr1G081080.12 | Barley | nucleus | 29.39 | 23.84 |
| CDY14662 | Canola | nucleus | 28.95 | 23.49 |
| CDX74133 | Canola | nucleus | 28.95 | 23.49 |
| CDX82223 | Canola | nucleus | 28.51 | 23.21 |
| CDY18809 | Canola | nucleus | 27.63 | 22.99 |
| CDY53967 | Canola | nucleus | 28.51 | 22.89 |
| CDX81837 | Canola | nucleus | 29.82 | 22.82 |
| CDY06393 | Canola | nucleus | 29.82 | 22.82 |
| CDX97206 | Canola | nucleus | 28.07 | 22.46 |
| CDY70458 | Canola | nucleus | 39.47 | 22.22 |
| CDY32398 | Canola | nucleus | 28.95 | 22.15 |
| CDY19591 | Canola | nucleus | 27.63 | 21.43 |
| CDX98930 | Canola | nucleus | 25.0 | 21.35 |
| CDY30854 | Canola | nucleus | 13.6 | 21.23 |
| CDX70098 | Canola | nucleus | 24.56 | 20.97 |
| Zm00001d026305_P002 | Maize | nucleus | 25.0 | 12.61 |
Protein Annotations
| MapMan:15.5.51.1 | GO:A0A078EMV7 | InterPro:CCAAT-binding_factor_CS | EnsemblPlants:CDY02477 | ProteinID:CDY02477 | ProteinID:CDY02477.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016602 | EnsemblPlantsGene:GSBRNA2T00114112001 | InterPro:IPR001289 |
| InterPro:NFYA | PFAM:PF02045 | PRINTS:PR00616 | ScanProsite:PS00686 | PFscan:PS51152 | PANTHER:PTHR12632 |
| PANTHER:PTHR12632:SF8 | SMART:SM00521 | UniParc:UPI0004EE374A | SEG:seg | : | : |
Description
BnaA08g00840D
Coordinates
chrLK031935:+:332057..333569
Molecular Weight (calculated)
25411.1 Da
IEP (calculated)
9.831
GRAVY (calculated)
-0.613
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MQVFQRKDSM PTNTNIQGSQ SFSLTKDMMM MSTQSSLQLQ DQDSSSTQSS GESGGGCEVA SFVEHNRYGC SSIVNTNLPD SVFPLPTSDL ASWPPPCPET
101: PHFNGFLAPE YASQPTALSH LEMMGLASSR VPLPHNIQEN EPIFVNAKQY HAILRRRKHR AKLEAQNKLI KSRKPYLHES RHLHALKRVR GSGGRFLNTK
201: KVQDSSNTPF RFSGYPSTHY VSALMLGT
101: PHFNGFLAPE YASQPTALSH LEMMGLASSR VPLPHNIQEN EPIFVNAKQY HAILRRRKHR AKLEAQNKLI KSRKPYLHES RHLHALKRVR GSGGRFLNTK
201: KVQDSSNTPF RFSGYPSTHY VSALMLGT
001: MQVFQRKEDS SWGNSMPTTN SNIQGSESFS LTKDMIMSTT QLPAMKHSGL QLQNQDSTSS QSTEEESGGG EVASFGEYKR YGCSIVNNNL SGYIENLGKP
101: IENYTKSITT SSMVSQDSVF PAPTSGQISW SLQCAETSHF NGFLAPEYAS TPTALPHLEM MGLVSSRVPL PHHIQENEPI FVNAKQYHAI LRRRKHRAKL
201: EAQNKLIKCR KPYLHESRHL HALKRARGSG GRFLNTKKLQ ESSNSLCSSQ MANGQNFSMS PHGGGSGIGS SSISPSSNSN CINMFQNPQF RFSGYPSTHH
301: ASALMSGT
101: IENYTKSITT SSMVSQDSVF PAPTSGQISW SLQCAETSHF NGFLAPEYAS TPTALPHLEM MGLVSSRVPL PHHIQENEPI FVNAKQYHAI LRRRKHRAKL
201: EAQNKLIKCR KPYLHESRHL HALKRARGSG GRFLNTKKLQ ESSNSLCSSQ MANGQNFSMS PHGGGSGIGS SSISPSSNSN CINMFQNPQF RFSGYPSTHH
301: ASALMSGT
Arabidopsis Description
NFYA5Nuclear transcription factor Y subunit A-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYH4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.