Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023913.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDX82223 | Canola | nucleus | 76.67 | 49.29 |
| CDY06393 | Canola | nucleus | 78.33 | 47.32 |
| CDY32398 | Canola | nucleus | 76.67 | 46.31 |
| CDY19591 | Canola | nucleus | 75.0 | 45.92 |
| AT3G20910.1 | Thale cress | nucleus | 73.89 | 43.89 |
| KRH14162 | Soybean | nucleus | 58.33 | 34.2 |
| KRH73967 | Soybean | nucleus | 58.33 | 34.2 |
| CDX78492 | Canola | nucleus | 35.0 | 30.73 |
| KRH46473 | Soybean | nucleus | 53.89 | 28.87 |
| KRG98391 | Soybean | nucleus | 53.89 | 28.7 |
| CDX91161 | Canola | nucleus | 33.89 | 27.85 |
| VIT_06s0004g02270.t01 | Wine grape | nucleus | 47.22 | 27.78 |
| CDY09571 | Canola | nucleus | 27.78 | 27.32 |
| CDY02298 | Canola | nucleus | 27.78 | 27.32 |
| CDX85686 | Canola | nucleus | 34.44 | 26.27 |
| CDY05192 | Canola | nucleus | 26.11 | 26.26 |
| CDX84285 | Canola | nucleus | 28.33 | 26.02 |
| CDY31636 | Canola | nucleus | 28.33 | 25.89 |
| CDX70480 | Canola | nucleus | 36.67 | 25.48 |
| Os03t0696300-01 | Rice | nucleus | 36.67 | 25.38 |
| Solyc11g065700.1.1 | Tomato | nucleus | 40.56 | 24.33 |
| PGSC0003DMT400018959 | Potato | nucleus | 40.56 | 24.33 |
| CDY69800 | Canola | nucleus | 31.11 | 24.24 |
| CDY26138 | Canola | nucleus | 31.11 | 23.83 |
| CDX97206 | Canola | nucleus | 37.22 | 23.51 |
| Zm00001d033602_P002 | Maize | nucleus | 34.44 | 23.48 |
| CDX72947 | Canola | nucleus, plasma membrane, plastid | 31.11 | 23.33 |
| PGSC0003DMT400027785 | Potato | nucleus | 40.0 | 23.23 |
| Solyc01g008490.2.1 | Tomato | nucleus | 40.0 | 23.08 |
| TraesCS4D01G033700.1 | Wheat | nucleus | 33.89 | 22.93 |
| TraesCS4A01G277300.1 | Wheat | nucleus | 33.89 | 22.93 |
| CDY53967 | Canola | nucleus | 36.11 | 22.89 |
| KXG37797 | Sorghum | nucleus | 33.89 | 22.85 |
| GSMUA_Achr3P29730_001 | Banana | nucleus | 39.44 | 22.19 |
| CDY02477 | Canola | nucleus | 27.78 | 21.93 |
| GSMUA_Achr4P03600_001 | Banana | nucleus | 36.11 | 21.81 |
| CDY56623 | Canola | nucleus | 27.78 | 21.37 |
| GSMUA_Achr4P11090_001 | Banana | vacuole | 42.22 | 20.77 |
| CDX70098 | Canola | nucleus | 29.44 | 19.85 |
| CDY48025 | Canola | nucleus | 31.67 | 19.59 |
| CDX98930 | Canola | nucleus | 28.89 | 19.48 |
| CDY18809 | Canola | nucleus | 29.44 | 19.34 |
| CDY51397 | Canola | nucleus | 30.56 | 19.3 |
| CDX74133 | Canola | nucleus | 28.89 | 18.51 |
| CDY14662 | Canola | nucleus | 28.89 | 18.51 |
| CDX82133 | Canola | nucleus | 32.78 | 18.5 |
| CDY30854 | Canola | nucleus | 15.0 | 18.49 |
| CDY33084 | Canola | nucleus | 29.44 | 17.73 |
| CDX96435 | Canola | nucleus | 31.11 | 17.39 |
| CDY33253 | Canola | nucleus | 29.44 | 17.21 |
| CDY39091 | Canola | nucleus | 28.89 | 16.88 |
| CDY21741 | Canola | nucleus | 29.44 | 16.46 |
| CDX72950 | Canola | nucleus | 31.11 | 16.33 |
| CDY70458 | Canola | nucleus | 31.11 | 13.83 |
| CDX81837 | Canola | nucleus | 17.22 | 10.4 |
Protein Annotations
| MapMan:15.5.51.1 | GO:A0A078HG42 | UniProt:A0A078HG42 | InterPro:CCAAT-binding_factor_CS | EnsemblPlants:CDY37330 | ProteinID:CDY37330 |
| ProteinID:CDY37330.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016602 | EnsemblPlantsGene:GSBRNA2T00063860001 |
| InterPro:IPR001289 | InterPro:NFYA | PFAM:PF02045 | PRINTS:PR00616 | ScanProsite:PS00686 | PFscan:PS51152 |
| PANTHER:PTHR12632 | PANTHER:PTHR12632:SF14 | SMART:SM00521 | UniParc:UPI000254471D | SEG:seg | : |
Description
BnaA01g25500DBnaA01g25500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HG42]
Coordinates
chrLK032397:-:349520..351734
Molecular Weight (calculated)
20510.4 Da
IEP (calculated)
11.198
GRAVY (calculated)
-1.228
Length
180 amino acids
Sequence
(BLAST)
(BLAST)
001: MATVSRQRIG DNICQGNPMK RLTYVPYGGM PHSRMPLPPE MAQDPVYVNA KQYQAILRRR QARAKAELEK KLIKSRKPYL HESRHQHAIR RPRGNGGRFA
101: KKTNTKAAQQ KAGEKRNACR TQSPTSSSSD QPEAWNDENR TQSKEMQSTA CKRRKEADCS GQQWNIISSN HPSQARLAIK
101: KKTNTKAAQQ KAGEKRNACR TQSPTSSSSD QPEAWNDENR TQSKEMQSTA CKRRKEADCS GQQWNIISSN HPSQARLAIK
001: MGIEDMHSKS DSGGNKVDSE VHGTVSSSIN SLNPWHRAAA ACNANSSVEA GDKSSKSIAL ALESNGSKSP SNRDNTVNKE SQVTTSPQSA GDYSDKNQES
101: LHHGITQPPP HPQLVGHTVG WASSNPYQDP YYAGVMGAYG HHPLGFVPYG GMPHSRMPLP PEMAQEPVFV NAKQYQAILR RRQARAKAEL EKKLIKSRKP
201: YLHESRHQHA MRRPRGTGGR FAKKTNTEAS KRKAEEKSNG HVTQSPSSSN SDQGEAWNGD YRTPQGDEMQ SSAYKRREEG ECSGQQWNSL SSNHPSQARL
301: AIK
101: LHHGITQPPP HPQLVGHTVG WASSNPYQDP YYAGVMGAYG HHPLGFVPYG GMPHSRMPLP PEMAQEPVFV NAKQYQAILR RRQARAKAEL EKKLIKSRKP
201: YLHESRHQHA MRRPRGTGGR FAKKTNTEAS KRKAEEKSNG HVTQSPSSSN SDQGEAWNGD YRTPQGDEMQ SSAYKRREEG ECSGQQWNSL SSNHPSQARL
301: AIK
Arabidopsis Description
NFYA9Nuclear transcription factor Y subunit A-9 [Source:UniProtKB/Swiss-Prot;Acc:Q945M9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.