Factsheet for Bra023913.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37330	Canola	nucleus	100.0	100.0
Bra031242.1-P	Field mustard	nucleus	77.78	47.46
Bra001806.1-P	Field mustard	nucleus	76.11	44.48
AT3G20910.1	Thale cress	nucleus	73.89	43.89
KRH73967	Soybean	nucleus	58.33	34.2
KRH14162	Soybean	nucleus	58.33	34.2
KRH46473	Soybean	nucleus	53.89	28.87
KRG98391	Soybean	nucleus	53.89	28.7
VIT_06s0004g02270.t01	Wine grape	nucleus	47.22	27.78
Bra032395.1-P	Field mustard	nucleus	27.78	27.32
Bra005397.1-P	Field mustard	nucleus	28.33	25.89
Bra023378.1-P	Field mustard	nucleus	34.44	25.83
Os03t0696300-01	Rice	nucleus	36.67	25.38
Bra006165.1-P	Field mustard	nucleus	35.0	24.8
Solyc11g065700.1.1	Tomato	nucleus	40.56	24.33
PGSC0003DMT400018959	Potato	nucleus	40.56	24.33
Bra014368.1-P	Field mustard	nucleus	31.11	24.24
Bra008878.1-P	Field mustard	nucleus	37.22	23.67
Zm00001d033602_P002	Maize	nucleus	34.44	23.48
PGSC0003DMT400027785	Potato	nucleus	40.0	23.23
Solyc01g008490.2.1	Tomato	nucleus	40.0	23.08
TraesCS4A01G277300.1	Wheat	nucleus	33.89	22.93
TraesCS4D01G033700.1	Wheat	nucleus	33.89	22.93
KXG37797	Sorghum	nucleus	33.89	22.85
GSMUA_Achr3P29730_001	Banana	nucleus	39.44	22.19
GSMUA_Achr4P03600_001	Banana	nucleus	36.11	21.81
Bra037968.1-P	Field mustard	nucleus	30.56	21.57
Bra030899.1-P	Field mustard	nucleus	29.44	21.12
Bra030996.1-P	Field mustard	mitochondrion	24.44	20.85
GSMUA_Achr4P11090_001	Banana	vacuole	42.22	20.77
Bra009200.1-P	Field mustard	nucleus	29.44	19.85
Bra008052.1-P	Field mustard	nucleus	31.67	19.59
Bra040529.1-P	Field mustard	nucleus	30.0	19.22
Bra001164.1-P	Field mustard	nucleus	28.33	18.15
Bra016031.1-P	Field mustard	nucleus	31.11	17.39
Bra021527.1-P	Field mustard	nucleus	28.89	16.88

Protein Annotations

MapMan:15.5.51.1	EnsemblPlantsGene:Bra023913	EnsemblPlants:Bra023913.1	EnsemblPlants:Bra023913.1-P	InterPro:CCAAT-binding_factor_CS	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016602	InterPro:IPR001289	UniProt:M4E559	InterPro:NFYA
PFAM:PF02045	PRINTS:PR00616	ScanProsite:PS00686	PFscan:PS51152	PANTHER:PTHR12632	PANTHER:PTHR12632:SF14
SMART:SM00521	UniParc:UPI000254471D	SEG:seg	:	:	:

Description

AT3G20910 (E=2e-058) NF-YA9 | NF-YA9 (NUCLEAR FACTOR Y, SUBUNIT A9); specific transcriptional repressor/ transcription factor

Coordinates

chrA01:-:20990364..20992358

Molecular Weight (calculated)

20510.4 Da

IEP (calculated)

11.198

GRAVY (calculated)

-1.228

Length

180 amino acids

Sequence
(BLAST)

001: MATVSRQRIG DNICQGNPMK RLTYVPYGGM PHSRMPLPPE MAQDPVYVNA KQYQAILRRR QARAKAELEK KLIKSRKPYL HESRHQHAIR RPRGNGGRFA
101: KKTNTKAAQQ KAGEKRNACR TQSPTSSSSD QPEAWNDENR TQSKEMQSTA CKRRKEADCS GQQWNIISSN HPSQARLAIK

Best Arabidopsis Sequence Match ( AT3G20910.1 )
(BLAST)

001: MGIEDMHSKS DSGGNKVDSE VHGTVSSSIN SLNPWHRAAA ACNANSSVEA GDKSSKSIAL ALESNGSKSP SNRDNTVNKE SQVTTSPQSA GDYSDKNQES
101: LHHGITQPPP HPQLVGHTVG WASSNPYQDP YYAGVMGAYG HHPLGFVPYG GMPHSRMPLP PEMAQEPVFV NAKQYQAILR RRQARAKAEL EKKLIKSRKP
201: YLHESRHQHA MRRPRGTGGR FAKKTNTEAS KRKAEEKSNG HVTQSPSSSN SDQGEAWNGD YRTPQGDEMQ SSAYKRREEG ECSGQQWNSL SSNHPSQARL
301: AIK

Arabidopsis Description

NFYA9Nuclear transcription factor Y subunit A-9 [Source:UniProtKB/Swiss-Prot;Acc:Q945M9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.