Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG37797 | Sorghum | nucleus | 76.15 | 74.16 |
| Zm00001d033602_P002 | Maize | nucleus | 74.23 | 73.11 |
| TraesCS4D01G033700.1 | Wheat | nucleus | 73.85 | 72.18 |
| TraesCS4A01G277300.1 | Wheat | nucleus | 71.54 | 69.92 |
| Os03t0174900-01 | Rice | vacuole | 30.38 | 37.8 |
| CDX78492 | Canola | nucleus | 29.23 | 37.07 |
| CDY37330 | Canola | nucleus | 25.38 | 36.67 |
| Bra023913.1-P | Field mustard | nucleus | 25.38 | 36.67 |
| GSMUA_Achr4P03600_001 | Banana | nucleus | 41.54 | 36.24 |
| Os12t0613000-01 | Rice | nucleus | 30.0 | 35.94 |
| Os08t0196700-01 | Rice | nucleus | 26.54 | 35.75 |
| CDX85686 | Canola | nucleus | 31.54 | 34.75 |
| GSMUA_Achr3P29730_001 | Banana | nucleus | 42.69 | 34.69 |
| Bra006165.1-P | Field mustard | nucleus | 33.85 | 34.65 |
| Bra023378.1-P | Field mustard | nucleus | 31.92 | 34.58 |
| KRH27472 | Soybean | nucleus | 39.23 | 33.66 |
| CDX91161 | Canola | nucleus | 28.08 | 33.33 |
| Solyc10g079150.1.1 | Tomato | nucleus | 28.08 | 33.33 |
| CDX70480 | Canola | nucleus | 33.08 | 33.2 |
| AT5G12840.3 | Thale cress | nucleus | 33.85 | 32.35 |
| PGSC0003DMT400021053 | Potato | nucleus | 29.62 | 32.08 |
| VIT_08s0007g08250.t01 | Wine grape | nucleus | 43.08 | 31.64 |
| CDX82223 | Canola | nucleus | 33.85 | 31.43 |
| KRH20817 | Soybean | nucleus | 36.15 | 30.92 |
| CDX97206 | Canola | nucleus | 33.85 | 30.88 |
| Bra008878.1-P | Field mustard | nucleus | 33.46 | 30.74 |
| VIT_06s0004g02270.t01 | Wine grape | nucleus | 36.15 | 30.72 |
| CDY53967 | Canola | nucleus | 33.46 | 30.63 |
| GSMUA_Achr4P11090_001 | Banana | vacuole | 43.08 | 30.6 |
| KRG98391 | Soybean | nucleus | 39.62 | 30.47 |
| CDY06393 | Canola | nucleus | 34.62 | 30.2 |
| Bra031242.1-P | Field mustard | nucleus | 34.23 | 30.17 |
| KRH46473 | Soybean | nucleus | 38.85 | 30.06 |
| Os10t0397900-00 | Rice | nucleus | 18.85 | 29.52 |
| AT3G20910.1 | Thale cress | nucleus | 34.23 | 29.37 |
| CDY32398 | Canola | nucleus | 33.46 | 29.19 |
| KRH73967 | Soybean | nucleus | 34.23 | 28.99 |
| CDY19591 | Canola | nucleus | 32.69 | 28.91 |
| KRH14162 | Soybean | nucleus | 33.46 | 28.34 |
| Bra001806.1-P | Field mustard | nucleus | 33.46 | 28.25 |
| VIT_13s0064g00860.t01 | Wine grape | nucleus | 43.46 | 27.9 |
| Os02t0776400-01 | Rice | nucleus | 27.31 | 26.3 |
| Os07t0608200-01 | Rice | nucleus | 30.38 | 25.99 |
| Os03t0411100-01 | Rice | nucleus | 30.0 | 24.61 |
| Os12t0618600-01 | Rice | nucleus | 28.08 | 23.47 |
| Os03t0647600-01 | Rice | nucleus | 30.38 | 22.32 |
| Os07t0158500-00 | Rice | nucleus | 27.69 | 19.0 |
Protein Annotations
| MapMan:15.5.51.1 | UniProt:A0A0P0W2B5 | ProteinID:BAS85887.1 | InterPro:CCAAT-binding_factor_CS | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016602 | InterPro:IPR001289 | InterPro:NFYA | EnsemblPlantsGene:Os03g0696300 | EnsemblPlants:Os03t0696300-01 |
| PFAM:PF02045 | PRINTS:PR00616 | ScanProsite:PS00686 | PFscan:PS51152 | PANTHER:PTHR12632 | SMART:SM00521 |
| UniParc:UPI000393C4A6 | SEG:seg | : | : | : | : |
Description
HAP2 SUBUNIT OF CCAAT-BOX BINDING COMPLEXSimilar to Nuclear transcription factor Y subunit A-1. (Os03t0696300-01);Similar to nuclear transcription factor Y subunit A-1. (Os03t0696300-02)
Coordinates
chr3:+:27890692..27894467
Molecular Weight (calculated)
28209.9 Da
IEP (calculated)
9.130
GRAVY (calculated)
-0.866
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: ASMESRPGGT NLVEPRGQGA LPSGIPIQQP WWTTSAGVGA VSPAVVAPGS GAGISLSGRD GGGDDAAEES SDDSRRSGET KDGSTDQEKH HATSQMTALA
101: SDYLTPFSQL ELNQPIASAA YQYPDSYYMG MVGPYGPQAM SAQTHFQLPG LTHSRMPLPL EISEEPVYVN AKQYHGILRR RQSRAKAELE KKVVKSRKPY
201: LHESRHQHAM RRARGTGGRF LNTKKNEDGA PSEKAEPNKG EQNSGYRRIP PDLQLLQKET
101: SDYLTPFSQL ELNQPIASAA YQYPDSYYMG MVGPYGPQAM SAQTHFQLPG LTHSRMPLPL EISEEPVYVN AKQYHGILRR RQSRAKAELE KKVVKSRKPY
201: LHESRHQHAM RRARGTGGRF LNTKKNEDGA PSEKAEPNKG EQNSGYRRIP PDLQLLQKET
001: MQSKPGRENE EEVNNHHAVQ QPMMYAEPWW KNNSFGVVPQ ARPSGIPSNS SSLDCPNGSE SNDVHSASED GALNGENDGT WKDSQAATSS RSVDNHGMEG
101: NDPALSIRNM HDQPLVQPPE LVGHYIACVP NPYQDPYYGG LMGAYGHQQL GFRPYLGMPR ERTALPLDMA QEPVYVNAKQ YEGILRRRKA RAKAELERKV
201: IRDRKPYLHE SRHKHAMRRA RASGGRFAKK SEVEAGEDAG GRDRERGSAT NSSGSEQVET DSNETLNSSG AP
101: NDPALSIRNM HDQPLVQPPE LVGHYIACVP NPYQDPYYGG LMGAYGHQQL GFRPYLGMPR ERTALPLDMA QEPVYVNAKQ YEGILRRRKA RAKAELERKV
201: IRDRKPYLHE SRHKHAMRRA RASGGRFAKK SEVEAGEDAG GRDRERGSAT NSSGSEQVET DSNETLNSSG AP
Arabidopsis Description
NFYA1Nuclear transcription factor Y subunit A-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXV5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.