Factsheet for Os08t0196700-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0003g04650.t01	Wine grape	nucleus	45.08	41.83
Solyc02g069860.2.1	Tomato	nucleus	44.04	40.87
KRH42997	Soybean	nucleus	43.52	40.78
KRH11777	Soybean	nucleus	43.01	40.49
PGSC0003DMT400054416	Potato	nucleus	43.52	40.0
Bra032395.1-P	Field mustard	nucleus	37.82	39.89
CDY02298	Canola	nucleus	37.82	39.89
CDY09571	Canola	nucleus	37.31	39.34
PGSC0003DMT400030813	Potato	nucleus	40.93	39.11
KRH59113	Soybean	nucleus	43.01	38.25
KRH36784	Soybean	nucleus	42.49	37.44
Os12t0613000-01	Rice	nucleus	41.45	36.87
GSMUA_Achr7P01070_001	Banana	nucleus	44.56	36.75
AT1G30500.2	Thale cress	nucleus	35.75	36.32
GSMUA_Achr9P10300_001	Banana	nucleus	43.52	35.9
CDX84285	Canola	nucleus	36.27	35.71
Bra005397.1-P	Field mustard	nucleus	36.27	35.53
CDY31636	Canola	nucleus	36.27	35.53
GSMUA_Achr4P31650_001	Banana	nucleus	41.97	35.53
AT2G34720.1	Thale cress	nucleus	36.27	35.35
Os03t0174900-01	Rice	vacuole	33.16	30.62
Os03t0696300-01	Rice	nucleus	35.75	26.54
Os10t0397900-00	Rice	nucleus	21.24	24.7
Os02t0776400-01	Rice	nucleus	33.68	24.07
Os07t0608200-01	Rice	nucleus	33.68	21.38
Os03t0411100-01	Rice	nucleus	33.68	20.5
Os12t0618600-01	Rice	nucleus	29.53	18.33
Os03t0647600-01	Rice	nucleus	30.57	16.67
Os07t0158500-00	Rice	nucleus	29.53	15.04

Protein Annotations

MapMan:15.5.51.1	EntrezGene:4344874	EMBL:AB288027	EMBL:AK059903	ProteinID:BAD03416.1	ProteinID:BAD03691.1
ProteinID:BAF23101.1	ProteinID:BAT04217.1	ProteinID:EAZ41807.1	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EMBL:HQ731479
InterPro:IPR001289	InterPro:NFYA	EnsemblPlantsGene:Os08g0196700	EnsemblPlants:Os08t0196700-01	PFAM:PF02045	PRINTS:PR00616
PFscan:PS51152	PANTHER:PTHR12632	PANTHER:PTHR12632:SF18	UniProt:Q6Z065	SMART:SM00521	UniParc:UPI00002260EA
RefSeq:XP_015648196.1	SEG:seg	:	:	:	:

Description

HAP2 SUBUNIT OF CCAAT-BOX BINDING COMPLEXHAP2 subunit of HAP complex, Nuclear Factor Y (NF-YA) transcription factor, Drought stress tolerance (Os08t0196700-01)

Coordinates

chr8:+:5597606..5601049

Molecular Weight (calculated)

20753.5 Da

IEP (calculated)

10.052

GRAVY (calculated)

-0.679

Length

193 amino acids

Sequence
(BLAST)

001: MKPDGETQLR PTAAGHPDPG LGTSSAEYVA SLGPATAPVS YPYISTYYGG TYGAYSGQPL VNAALMAMPP HSVPLVTDAV VEPIYVNARQ YHGILRRRQS
101: RAKAESENKA NKIRKPYLHE SRHLHALKRA RGSGGRFLNS KAVEGKQDTK SVDKKDGAVP SEEKRDKKLA NSIIKLENSS PTTQPGADAS DVV

Best Arabidopsis Sequence Match ( AT1G30500.2 )
(BLAST)

001: MTSSIHELSD NIGSHEKQEQ RDSHFQPPIP SARNYESIVT SLVYSDPGTT NSMAPGQYPY PDPYYRSIFA PPPQPYTGVH LQLMGVQQQG VPLPSDAVEE
101: PVFVNAKQYH GILRRRQSRA RLESQNKVIK SRKPYLHESR HLHAIRRPRG CGGRFLNAKK EDEHHEDSSH EEKSNLSAGK SAMAASSGTS

Arabidopsis Description

NFYA7Nuclear transcription factor Y subunit A-7 [Source:UniProtKB/Swiss-Prot;Acc:Q84JP1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.