Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032395.1-P | Field mustard | nucleus | 98.36 | 98.36 |
| CDY02298 | Canola | nucleus | 97.81 | 97.81 |
| AT1G30500.2 | Thale cress | nucleus | 77.6 | 74.74 |
| CDX84285 | Canola | nucleus | 63.39 | 59.18 |
| CDY31636 | Canola | nucleus | 63.39 | 58.88 |
| VIT_10s0003g04650.t01 | Wine grape | nucleus | 62.3 | 54.81 |
| KRH42997 | Soybean | nucleus | 56.83 | 50.49 |
| PGSC0003DMT400030813 | Potato | nucleus | 54.1 | 49.01 |
| KRH11777 | Soybean | nucleus | 54.64 | 48.78 |
| Solyc02g069860.2.1 | Tomato | nucleus | 54.1 | 47.6 |
| PGSC0003DMT400054416 | Potato | nucleus | 53.55 | 46.67 |
| KRH36784 | Soybean | nucleus | 55.19 | 46.12 |
| KRH59113 | Soybean | nucleus | 53.01 | 44.7 |
| HORVU0Hr1G010230.1 | Barley | nucleus | 34.97 | 40.25 |
| GSMUA_Achr7P01070_001 | Banana | nucleus | 49.18 | 38.46 |
| GSMUA_Achr4P31650_001 | Banana | nucleus | 47.54 | 38.16 |
| Os08t0196700-01 | Rice | nucleus | 39.34 | 37.31 |
| EES17387 | Sorghum | nucleus | 42.08 | 36.15 |
| TraesCS5A01G043300.2 | Wheat | nucleus | 39.89 | 34.76 |
| TraesCS5D01G052200.2 | Wheat | nucleus | 39.89 | 34.6 |
| HORVU5Hr1G010600.10 | Barley | nucleus | 39.89 | 34.11 |
| TraesCS5B01G047100.2 | Wheat | nucleus | 38.25 | 33.82 |
| GSMUA_Achr9P10300_001 | Banana | nucleus | 43.17 | 33.76 |
| Os12t0613000-01 | Rice | nucleus | 39.89 | 33.64 |
| CDX78492 | Canola | nucleus | 31.69 | 28.29 |
| CDY37330 | Canola | nucleus | 27.32 | 27.78 |
| CDY05192 | Canola | nucleus | 26.78 | 27.37 |
| CDY02477 | Canola | nucleus | 33.88 | 27.19 |
| CDX91161 | Canola | nucleus | 31.15 | 26.03 |
| CDY56623 | Canola | nucleus | 32.79 | 25.64 |
| CDY69800 | Canola | nucleus | 31.69 | 25.11 |
| Zm00001d041491_P001 | Maize | nucleus | 39.34 | 24.91 |
| CDY26138 | Canola | nucleus | 31.69 | 24.68 |
| CDX85686 | Canola | nucleus | 30.6 | 23.73 |
| CDX70480 | Canola | nucleus | 32.79 | 23.17 |
| CDY48025 | Canola | nucleus | 36.61 | 23.02 |
| CDY53967 | Canola | nucleus | 34.43 | 22.18 |
| CDY51397 | Canola | nucleus | 33.88 | 21.75 |
| CDX97206 | Canola | nucleus | 33.88 | 21.75 |
| CDX72947 | Canola | nucleus, plasma membrane, plastid | 28.42 | 21.67 |
| CDY33084 | Canola | nucleus | 33.88 | 20.74 |
| CDX82133 | Canola | nucleus | 36.07 | 20.69 |
| CDX82223 | Canola | nucleus | 31.15 | 20.36 |
| CDX96435 | Canola | nucleus | 35.52 | 20.19 |
| CDY14662 | Canola | nucleus | 30.6 | 19.93 |
| CDX74133 | Canola | nucleus | 30.6 | 19.93 |
| CDY06393 | Canola | nucleus | 32.24 | 19.8 |
| CDY18809 | Canola | nucleus | 28.96 | 19.34 |
| CDX72950 | Canola | nucleus | 36.07 | 19.24 |
| CDY39091 | Canola | nucleus | 32.24 | 19.16 |
| CDX98930 | Canola | nucleus | 27.87 | 19.1 |
| CDY33253 | Canola | nucleus | 31.69 | 18.83 |
| CDY32398 | Canola | nucleus | 30.6 | 18.79 |
| CDX70098 | Canola | nucleus | 27.32 | 18.73 |
| CDY19591 | Canola | nucleus | 28.96 | 18.03 |
| CDY21741 | Canola | nucleus | 31.69 | 18.01 |
| CDY30854 | Canola | nucleus | 14.21 | 17.81 |
| CDY70458 | Canola | nucleus | 36.07 | 16.3 |
| CDX81837 | Canola | nucleus | 20.77 | 12.75 |
Protein Annotations
| MapMan:15.5.51.1 | GO:A0A078F8C3 | UniProt:A0A078F8C3 | InterPro:CCAAT-binding_factor_CS | EnsemblPlants:CDY09571 | ProteinID:CDY09571 |
| ProteinID:CDY09571.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016602 | EnsemblPlantsGene:GSBRNA2T00031185001 |
| InterPro:IPR001289 | InterPro:NFYA | PFAM:PF02045 | PRINTS:PR00616 | ScanProsite:PS00686 | PFscan:PS51152 |
| PANTHER:PTHR12632 | PANTHER:PTHR12632:SF29 | SMART:SM00521 | UniParc:UPI0004EDD20B | SEG:seg | : |
Description
BnaC05g23480DBnaC05g23480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F8C3]
Coordinates
chrLK031997:+:574509..576144
Molecular Weight (calculated)
20803.5 Da
IEP (calculated)
9.306
GRAVY (calculated)
-1.007
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSVHDLSD KIETHDKQEH KDFQFQIQPP IPPGRNSAVY SEQLPHSMAP GHYPYPDPHY RSIFAPNPQA YPPRPYETGV HAHLMGVQQQ CVPLPSDAVE
101: EPVFVNAKQY HGILRRRQSR AKLESQNKVV KSRKPYLHES RHLHAIRRPR GCGGRFLNAK KEEEHHEGNH VEEKSMAASG GTS
101: EPVFVNAKQY HGILRRRQSR AKLESQNKVV KSRKPYLHES RHLHAIRRPR GCGGRFLNAK KEEEHHEGNH VEEKSMAASG GTS
001: MTSSIHELSD NIGSHEKQEQ RDSHFQPPIP SARNYESIVT SLVYSDPGTT NSMAPGQYPY PDPYYRSIFA PPPQPYTGVH LQLMGVQQQG VPLPSDAVEE
101: PVFVNAKQYH GILRRRQSRA RLESQNKVIK SRKPYLHESR HLHAIRRPRG CGGRFLNAKK EDEHHEDSSH EEKSNLSAGK SAMAASSGTS
101: PVFVNAKQYH GILRRRQSRA RLESQNKVIK SRKPYLHESR HLHAIRRPRG CGGRFLNAKK EDEHHEDSSH EEKSNLSAGK SAMAASSGTS
Arabidopsis Description
NFYA7Nuclear transcription factor Y subunit A-7 [Source:UniProtKB/Swiss-Prot;Acc:Q84JP1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.