Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 3
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d013571_P001 | |
| Zm00001d033419_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G34720.1 | Zm00001d013571_P001 | AT4G19700.1 | 21798944 |
| AT2G34720.1 | Zm00001d033419_P001 | AT4G19700.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES17387 | Sorghum | nucleus | 67.82 | 92.02 |
| HORVU0Hr1G010230.1 | Barley | nucleus | 42.21 | 76.73 |
| Os12t0613000-01 | Rice | nucleus | 55.71 | 74.19 |
| TraesCS5A01G043300.2 | Wheat | nucleus | 50.87 | 70.0 |
| TraesCS5D01G052200.2 | Wheat | nucleus | 50.87 | 69.67 |
| HORVU5Hr1G010600.10 | Barley | nucleus | 50.87 | 68.69 |
| TraesCS5B01G047100.2 | Wheat | nucleus | 48.79 | 68.12 |
| Zm00001d029489_P002 | Maize | nucleus | 17.3 | 55.56 |
| PGSC0003DMT400054416 | Potato | nucleus | 31.14 | 42.86 |
| Solyc02g069860.2.1 | Tomato | nucleus | 30.8 | 42.79 |
| VIT_10s0003g04650.t01 | Wine grape | nucleus | 30.1 | 41.83 |
| PGSC0003DMT400030813 | Potato | nucleus | 29.07 | 41.58 |
| KRH42997 | Soybean | nucleus | 29.07 | 40.78 |
| KRH11777 | Soybean | nucleus | 28.72 | 40.49 |
| CDY02298 | Canola | nucleus | 25.26 | 39.89 |
| Bra032395.1-P | Field mustard | nucleus | 25.26 | 39.89 |
| AT1G30500.2 | Thale cress | nucleus | 25.95 | 39.47 |
| CDY09571 | Canola | nucleus | 24.91 | 39.34 |
| GSMUA_Achr4P31650_001 | Banana | nucleus | 30.8 | 39.04 |
| KRH59113 | Soybean | nucleus | 29.07 | 38.71 |
| GSMUA_Achr7P01070_001 | Banana | nucleus | 30.45 | 37.61 |
| KRH36784 | Soybean | nucleus | 28.37 | 37.44 |
| GSMUA_Achr9P10300_001 | Banana | nucleus | 30.1 | 37.18 |
| AT2G34720.1 | Thale cress | nucleus | 24.91 | 36.36 |
| CDX84285 | Canola | nucleus | 24.57 | 36.22 |
| CDY31636 | Canola | nucleus | 24.57 | 36.04 |
| Bra005397.1-P | Field mustard | nucleus | 24.57 | 36.04 |
| Zm00001d033602_P002 | Maize | nucleus | 28.03 | 30.68 |
| Zm00001d027874_P004 | Maize | nucleus | 23.53 | 25.86 |
| Zm00001d022109_P003 | Maize | nucleus | 22.84 | 21.93 |
| Zm00001d006835_P002 | Maize | nucleus | 22.49 | 21.67 |
| Zm00001d018255_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 21.8 | 21.5 |
| Zm00001d031092_P001 | Maize | nucleus | 22.49 | 19.7 |
| Zm00001d033215_P001 | Maize | nucleus | 21.8 | 19.57 |
| Zm00001d007882_P001 | Maize | nucleus | 18.69 | 18.37 |
| Zm00001d013676_P002 | Maize | nucleus | 20.42 | 17.3 |
| Zm00001d026305_P002 | Maize | nucleus | 17.3 | 11.06 |
Protein Annotations
| EntrezGene:100383246 | MapMan:15.5.51.1 | UniProt:A0A1D6MWG6 | InterPro:CCAAT-binding_factor_CS | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016602 | InterPro:IPR001289 | InterPro:NFYA | ProteinID:ONM33121.1 | PFAM:PF02045 |
| PRINTS:PR00616 | ScanProsite:PS00686 | PFscan:PS51152 | PANTHER:PTHR12632 | PANTHER:PTHR12632:SF18 | SMART:SM00521 |
| UniParc:UPI000844F51C | EnsemblPlantsGene:Zm00001d041491 | EnsemblPlants:Zm00001d041491_P001 | EnsemblPlants:Zm00001d041491_T001 | SEG:seg | : |
Description
CCAAT-HAP2-transcription factor 212Nuclear transcription factor Y subunit A-7
Coordinates
chr3:-:123760201..123767258
Molecular Weight (calculated)
31011.2 Da
IEP (calculated)
9.782
GRAVY (calculated)
-0.844
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MQVTSDRPHR PPPSLFPSTP ALKFETQTIP SSPVATPSAT PRRPTPAPSA AARVLPLRPR AALIPPSAVG SALGPSPLDP PLVGDHRAED QSHQKKQTEP
101: GDQQEAPVTS SDSQPTVGTP STDYVAPYAP HDMSHAMGQY AYPNIDPYYG SLYAAAYGGH PLMHPTLVGM HPAGLPLPTD AIEEPVYVNA KQYNAILRRR
201: QSRAKAESER KLVKGRKPYL HESRHQHALK RARGAGGRFL NSKSDDKEEN SDSSQKEIQN GVAPQKGGQP STPPSPNGAS SAYQAPSRE
101: GDQQEAPVTS SDSQPTVGTP STDYVAPYAP HDMSHAMGQY AYPNIDPYYG SLYAAAYGGH PLMHPTLVGM HPAGLPLPTD AIEEPVYVNA KQYNAILRRR
201: QSRAKAESER KLVKGRKPYL HESRHQHALK RARGAGGRFL NSKSDDKEEN SDSSQKEIQN GVAPQKGGQP STPPSPNGAS SAYQAPSRE
001: MTSSIHELSD NIGSHEKQEQ RDSHFQPPIP SARNYESIVT SLVYSDPGTT NSMAPGQYPY PDPYYRSIFA PPPQPYTGVH LQLMGVQQQG VPLPSDAVEE
101: PVFVNAKQYH GILRRRQSRA RLESQNKVIK SRKPYLHESR HLHAIRRPRG CGGRFLNAKK EDEHHEDSSH EEKSNLSAGK SAMAASSGTS
101: PVFVNAKQYH GILRRRQSRA RLESQNKVIK SRKPYLHESR HLHAIRRPRG CGGRFLNAKK EDEHHEDSSH EEKSNLSAGK SAMAASSGTS
Arabidopsis Description
NFYA7Nuclear transcription factor Y subunit A-7 [Source:UniProtKB/Swiss-Prot;Acc:Q84JP1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.