Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH59113 | Soybean | nucleus | 92.72 | 88.02 |
| KRH11777 | Soybean | nucleus | 80.1 | 80.49 |
| KRH36784 | Soybean | nucleus | 81.07 | 76.26 |
| VIT_10s0003g04650.t01 | Wine grape | nucleus | 73.3 | 72.6 |
| PGSC0003DMT400030813 | Potato | nucleus | 61.16 | 62.38 |
| Solyc02g069860.2.1 | Tomato | nucleus | 62.14 | 61.54 |
| PGSC0003DMT400054416 | Potato | nucleus | 61.16 | 60.0 |
| AT1G30500.2 | Thale cress | nucleus | 54.37 | 58.95 |
| Bra032395.1-P | Field mustard | nucleus | 51.46 | 57.92 |
| CDY02298 | Canola | nucleus | 50.97 | 57.38 |
| CDY09571 | Canola | nucleus | 50.49 | 56.83 |
| AT2G34720.1 | Thale cress | nucleus | 50.0 | 52.02 |
| HORVU0Hr1G010230.1 | Barley | nucleus | 37.86 | 49.06 |
| CDX84285 | Canola | nucleus | 45.63 | 47.96 |
| Bra005397.1-P | Field mustard | nucleus | 45.63 | 47.72 |
| CDY31636 | Canola | nucleus | 45.63 | 47.72 |
| GSMUA_Achr7P01070_001 | Banana | nucleus | 50.97 | 44.87 |
| Os08t0196700-01 | Rice | nucleus | 40.78 | 43.52 |
| TraesCS5A01G043300.2 | Wheat | nucleus | 44.17 | 43.33 |
| TraesCS5B01G047100.2 | Wheat | nucleus | 43.2 | 43.0 |
| TraesCS5D01G052200.2 | Wheat | nucleus | 43.69 | 42.65 |
| GSMUA_Achr4P31650_001 | Banana | nucleus | 46.6 | 42.11 |
| HORVU5Hr1G010600.10 | Barley | nucleus | 43.69 | 42.06 |
| GSMUA_Achr9P10300_001 | Banana | nucleus | 47.57 | 41.88 |
| EES17387 | Sorghum | nucleus | 42.72 | 41.31 |
| Os12t0613000-01 | Rice | nucleus | 42.23 | 40.09 |
| KRH02649 | Soybean | nucleus | 32.04 | 30.99 |
| Zm00001d041491_P001 | Maize | nucleus | 40.78 | 29.07 |
| KRH37469 | Soybean | nucleus | 32.04 | 28.95 |
| KRH12475 | Soybean | nucleus | 32.04 | 28.95 |
| KRH19255 | Soybean | nucleus | 32.52 | 28.76 |
| KRH20817 | Soybean | nucleus | 40.78 | 27.63 |
| KRH27472 | Soybean | nucleus | 40.29 | 27.39 |
| KRG98391 | Soybean | nucleus | 37.86 | 23.08 |
| KRH72156 | Soybean | nucleus | 36.41 | 22.39 |
| KRH46473 | Soybean | nucleus | 36.41 | 22.32 |
| KRH32866 | Soybean | nucleus | 34.95 | 22.02 |
| KRH14162 | Soybean | nucleus | 31.55 | 21.17 |
| KRH73967 | Soybean | nucleus | 31.07 | 20.85 |
| KRH68018 | Soybean | nucleus | 33.01 | 20.73 |
| KRH10071 | Soybean | nucleus | 29.61 | 20.54 |
| KRH06120 | Soybean | nucleus | 31.07 | 20.06 |
| KRH47551 | Soybean | nucleus | 32.04 | 18.97 |
| KRG96274 | Soybean | endoplasmic reticulum, extracellular, vacuole | 31.55 | 18.79 |
Protein Annotations
| MapMan:15.5.51.1 | EMBL:ACUP02004841 | InterPro:CCAAT-binding_factor_CS | EnsemblPlantsGene:GLYMA_08G124200 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016602 | UniProt:I1KSM7 | InterPro:IPR001289 | EnsemblPlants:KRH42997 | ProteinID:KRH42997 |
| ProteinID:KRH42997.1 | ProteinID:KRH42998.1 | ProteinID:KRH42999.1 | InterPro:NFYA | PFAM:PF02045 | PRINTS:PR00616 |
| ScanProsite:PS00686 | PFscan:PS51152 | PANTHER:PTHR12632 | PANTHER:PTHR12632:SF29 | SMART:SM00521 | UniParc:UPI00023C62A9 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:+:9530445..9534640
Molecular Weight (calculated)
23029.5 Da
IEP (calculated)
7.292
GRAVY (calculated)
-1.081
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSAHDLTDN EDDGQQQSES QIQSPSANGI SDPDISTQNV NVQYATPGQL GTGHAMVPPV YPYPDPYYRS IFAPYDTQPY PPQAYSGQPM VHLQLMGIQQ
101: AGVPLPTDAV EEPVFVNAKQ YHGILRRRQS RAKAESENKV IRNRKPYLHE SRHKHALRRP RGCGGRFLNS KKDENQHDDV TSADKSQSNI NLNSNKNDQT
201: SSDRTS
101: AGVPLPTDAV EEPVFVNAKQ YHGILRRRQS RAKAESENKV IRNRKPYLHE SRHKHALRRP RGCGGRFLNS KKDENQHDDV TSADKSQSNI NLNSNKNDQT
201: SSDRTS
001: MTSSIHELSD NIGSHEKQEQ RDSHFQPPIP SARNYESIVT SLVYSDPGTT NSMAPGQYPY PDPYYRSIFA PPPQPYTGLM GVQQQGVPLP SDAVEEPVFV
101: NAKQYHGILR RRQSRARLES QNKVIKSRKP YLHESRHLHA IRRPRGCGGR FLNAKKEDEH HEDSSHEEKS NLSAGKSAMA ASSGTS
101: NAKQYHGILR RRQSRARLES QNKVIKSRKP YLHESRHLHA IRRPRGCGGR FLNAKKEDEH HEDSSHEEKS NLSAGKSAMA ASSGTS
Arabidopsis Description
NFYA7Nuclear transcription factor Y subunit A-7 [Source:UniProtKB/Swiss-Prot;Acc:Q84JP1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.