CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27472	Soybean	nucleus	89.47	89.77
KRH11777	Soybean	nucleus	27.63	40.98
KRH42997	Soybean	nucleus	27.63	40.78
KRH59113	Soybean	nucleus	27.96	39.17
KRH36784	Soybean	nucleus	27.63	38.36
TraesCS4A01G277300.1	Wheat	nucleus	32.89	37.59
Solyc01g087240.2.1	Tomato	nucleus	37.17	37.29
PGSC0003DMT400017698	Potato	nucleus	36.84	36.96
TraesCS4D01G033700.1	Wheat	nucleus	31.91	36.47
Os03t0696300-01	Rice	nucleus	30.92	36.15
VIT_13s0064g00860.t01	Wine grape	nucleus	48.03	36.05
KRG98391	Soybean	nucleus	39.8	35.8
KRH46473	Soybean	nucleus	39.14	35.42
KXG37797	Sorghum	nucleus	30.92	35.21
KRH73967	Soybean	nucleus	35.53	35.18
KRH14162	Soybean	nucleus	35.2	34.85
Zm00001d033602_P002	Maize	nucleus	30.26	34.85
GSMUA_Achr3P29730_001	Banana	nucleus	34.54	32.81
GSMUA_Achr4P03600_001	Banana	nucleus	31.58	32.21
KRH02649	Soybean	nucleus	22.37	31.92
KRH37469	Soybean	nucleus	23.36	31.14
KRH12475	Soybean	nucleus	23.03	30.7
KRH19255	Soybean	nucleus	23.03	30.04
GSMUA_Achr4P11090_001	Banana	vacuole	34.21	28.42
KRH72156	Soybean	nucleus	27.3	24.78
KRH10071	Soybean	nucleus	23.68	24.24
KRH06120	Soybean	nucleus	25.33	24.14
KRH68018	Soybean	nucleus	25.66	23.78
KRH47551	Soybean	nucleus	26.97	23.56
KRH32866	Soybean	nucleus	24.67	22.94
KRG96274	Soybean	endoplasmic reticulum, extracellular, vacuole	24.67	21.68

Protein Annotations

MapMan:15.5.51.1	EMBL:ACUP02008311	InterPro:CCAAT-binding_factor_CS	EnsemblPlantsGene:GLYMA_13G202300	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016602	UniProt:I1M0X4	InterPro:IPR001289	ProteinID:KRH20816.1	EnsemblPlants:KRH20817
ProteinID:KRH20817	ProteinID:KRH20817.1	InterPro:NFYA	PFAM:PF02045	PRINTS:PR00616	ScanProsite:PS00686
PFscan:PS51152	PANTHER:PTHR12632	SMART:SM00521	UniParc:UPI000233BD93	SEG:seg	:

Description

hypothetical protein

Coordinates

chr13:-:31596684..31603118

Molecular Weight (calculated)

34016.6 Da

IEP (calculated)

9.341

GRAVY (calculated)

-0.983

Length

304 amino acids

Sequence
(BLAST)

001: MPGKADTDDW RVERGEQIQF QSSIYSHHQP WRCGVGENAS KSSSADQLNG SIVNGITRSE TNDKSGEGVA KEYQNIKHAV LSTPFTMDKH LAPNPQMELV
101: GHSVVLTSPY SDAQHGQILT TYGQQVMINP QLYGMYHARM PLPPEMEEEP VYVNAKQYHG ILRRRQSRAK AELEKKVIKN RKPYLHESRH LHAMRRARGN
201: GGRFLNKKKL ENYNSDATSD IGQNTGANPS TNSPNTQHLF TNNENLGSSN ASQATVQDMH RVESFNIGYH NGNGLAELYH SQANGKKEGN CFGKERDPNN
301: GAFK

Best Arabidopsis Sequence Match ( AT3G20910.1 )
(BLAST)

001: MGIEDMHSKS DSGGNKVDSE VHGTVSSSIN SLNPWHRAAA ACNANSSVEA GDKSSKSIAL ALESNGSKSP SNRDNTVNKE SQVTTSPQSA GDYSDKNQES
101: LHHGITQPPP HPQLVGHTVG WASSNPYQDP YYAGVMGAYG HHPLGFVPYG GMPHSRMPLP PEMAQEPVFV NAKQYQAILR RRQARAKAEL EKKLIKSRKP
201: YLHESRHQHA MRRPRGTGGR FAKKTNTEAS KRKAEEKSNG HVTQSPSSSN SDQGEAWNGD YRTPQGDEMQ SSAYKRREEG ECSGQQWNSL SSNHPSQARL
301: AIK

Arabidopsis Description

NFYA9Nuclear transcription factor Y subunit A-9 [Source:UniProtKB/Swiss-Prot;Acc:Q945M9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.