Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH46473 | Soybean | nucleus | 95.86 | 96.43 |
| KRH73967 | Soybean | nucleus | 65.98 | 72.64 |
| KRH14162 | Soybean | nucleus | 64.5 | 71.01 |
| VIT_06s0004g02270.t01 | Wine grape | nucleus | 54.14 | 59.8 |
| CDX78492 | Canola | nucleus | 34.02 | 56.1 |
| AT5G12840.3 | Thale cress | nucleus | 44.08 | 54.78 |
| CDX70480 | Canola | nucleus | 41.42 | 54.05 |
| PGSC0003DMT400018959 | Potato | nucleus | 47.93 | 54.0 |
| Bra023913.1-P | Field mustard | nucleus | 28.7 | 53.89 |
| CDY37330 | Canola | nucleus | 28.7 | 53.89 |
| Solyc11g065700.1.1 | Tomato | nucleus | 47.63 | 53.67 |
| Bra006165.1-P | Field mustard | nucleus | 39.94 | 53.15 |
| Bra008878.1-P | Field mustard | nucleus | 43.2 | 51.59 |
| CDX97206 | Canola | nucleus | 43.49 | 51.58 |
| CDX85686 | Canola | nucleus | 35.8 | 51.27 |
| CDX82223 | Canola | nucleus | 42.01 | 50.71 |
| CDY53967 | Canola | nucleus | 42.6 | 50.7 |
| AT3G20910.1 | Thale cress | nucleus | 45.27 | 50.49 |
| PGSC0003DMT400027785 | Potato | nucleus | 46.15 | 50.32 |
| Bra023378.1-P | Field mustard | nucleus | 35.5 | 50.0 |
| Solyc01g008490.2.1 | Tomato | nucleus | 45.56 | 49.36 |
| CDY06393 | Canola | nucleus | 42.9 | 48.66 |
| CDX91161 | Canola | nucleus | 31.07 | 47.95 |
| Bra031242.1-P | Field mustard | nucleus | 41.72 | 47.8 |
| CDY32398 | Canola | nucleus | 42.01 | 47.65 |
| CDY19591 | Canola | nucleus | 40.24 | 46.26 |
| Bra001806.1-P | Field mustard | nucleus | 41.72 | 45.78 |
| KRH27472 | Soybean | nucleus | 37.28 | 41.58 |
| KRH20817 | Soybean | nucleus | 35.8 | 39.8 |
| Os03t0696300-01 | Rice | nucleus | 30.47 | 39.62 |
| TraesCS4A01G277300.1 | Wheat | nucleus | 30.47 | 38.72 |
| TraesCS4D01G033700.1 | Wheat | nucleus | 30.18 | 38.35 |
| Zm00001d033602_P002 | Maize | nucleus | 29.88 | 38.26 |
| KXG37797 | Sorghum | nucleus | 30.18 | 38.2 |
| KRH42997 | Soybean | nucleus | 23.08 | 37.86 |
| KRH11777 | Soybean | nucleus | 22.78 | 37.56 |
| KRH59113 | Soybean | nucleus | 22.78 | 35.48 |
| KRH36784 | Soybean | nucleus | 22.78 | 35.16 |
| GSMUA_Achr3P29730_001 | Banana | nucleus | 32.84 | 34.69 |
| GSMUA_Achr4P03600_001 | Banana | nucleus | 30.18 | 34.23 |
| KRH02649 | Soybean | nucleus | 20.41 | 32.39 |
| KRH19255 | Soybean | nucleus | 21.89 | 31.76 |
| KRH37469 | Soybean | nucleus | 21.3 | 31.58 |
| GSMUA_Achr4P11090_001 | Banana | vacuole | 33.73 | 31.15 |
| KRH12475 | Soybean | nucleus | 21.01 | 31.14 |
| KRH10071 | Soybean | nucleus | 23.08 | 26.26 |
| KRH72156 | Soybean | nucleus | 25.74 | 25.97 |
| KRH68018 | Soybean | nucleus | 25.15 | 25.91 |
| KRH47551 | Soybean | nucleus | 26.04 | 25.29 |
| KRH32866 | Soybean | nucleus | 23.96 | 24.77 |
| KRH06120 | Soybean | nucleus | 23.37 | 24.76 |
| KRG96274 | Soybean | endoplasmic reticulum, extracellular, vacuole | 24.56 | 23.99 |
Protein Annotations
| EntrezGene:100808378 | MapMan:15.5.51.1 | EMBL:ACUP02010882 | InterPro:CCAAT-binding_factor_CS | EnsemblPlantsGene:GLYMA_18G071000 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016602 | InterPro:IPR001289 | UniProt:K7MQE5 | EnsemblPlants:KRG98391 |
| ProteinID:KRG98391 | ProteinID:KRG98391.1 | ProteinID:KRG98392.1 | ProteinID:KRG98393.1 | InterPro:NFYA | PFAM:PF02045 |
| PRINTS:PR00616 | ScanProsite:PS00686 | PFscan:PS51152 | PANTHER:PTHR12632 | PANTHER:PTHR12632:SF14 | SMART:SM00521 |
| UniParc:UPI000233F259 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr18:+:6661434..6665009
Molecular Weight (calculated)
37080.3 Da
IEP (calculated)
6.923
GRAVY (calculated)
-1.092
Length
338 amino acids
Sequence
(BLAST)
(BLAST)
001: MQSKSETANR LRSDPHSFQP GSVYSEPWWR GIGYNPVAQT MAGANASNSS SLECPNGDSE SNEEGQSLSN SGMNEEDDDA TKDSQPAAPN GTGNYGQEQQ
101: GMQHTASSAP SMREECLTQT PQLELVGHSI ACATNPYQDP YYGGMMAAYG HQQLGYAPFI GMPHARMPLP LEMAQEPVYV NAKQYQGILR RRQARAKAEL
201: ERKLIKSRKP YLHESRHQHA MRRARGTGGR FAKKTDGEGS NHSGKEKDNG TDSVLSSQSI SSSGSEPLHS DSAETWNSPN MQQDARASKV HNRFKAPCYQ
301: NGSGSYHNHN GLQSSVYHSS SGERLEERDC SGQQLNHN
101: GMQHTASSAP SMREECLTQT PQLELVGHSI ACATNPYQDP YYGGMMAAYG HQQLGYAPFI GMPHARMPLP LEMAQEPVYV NAKQYQGILR RRQARAKAEL
201: ERKLIKSRKP YLHESRHQHA MRRARGTGGR FAKKTDGEGS NHSGKEKDNG TDSVLSSQSI SSSGSEPLHS DSAETWNSPN MQQDARASKV HNRFKAPCYQ
301: NGSGSYHNHN GLQSSVYHSS SGERLEERDC SGQQLNHN
001: MQSKPGRENE EEVNNHHAVQ QPMMYAEPWW KNNSFGVVPQ ARPSGIPSNS SSLDCPNGSE SNDVHSASED GALNGENDGT WKDSQAATSS RSDNHGMEGN
101: DPALSIRNMH DQPLVQPPEL VGHYIACVPN PYQDPYYGGL MGAYGHQQLG FRPYLGMPRE RTALPLDMAQ EPVYVNAKQY EGILRRRKAR AKAELERKVI
201: RDRKPYLHES RHKHAMRRAR ASGGRFAKKS EVEAGEDAGG RDRERGSATN SSGSEQVETD SNETLNSSGA P
101: DPALSIRNMH DQPLVQPPEL VGHYIACVPN PYQDPYYGGL MGAYGHQQLG FRPYLGMPRE RTALPLDMAQ EPVYVNAKQY EGILRRRKAR AKAELERKVI
201: RDRKPYLHES RHKHAMRRAR ASGGRFAKKS EVEAGEDAGG RDRERGSATN SSGSEQVETD SNETLNSSGA P
Arabidopsis Description
NFYA1Nuclear transcription factor Y subunit A-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXV5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.