Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX82223 | Canola | nucleus | 74.26 | 80.36 |
| CDY06393 | Canola | nucleus | 77.23 | 78.52 |
| CDY32398 | Canola | nucleus | 75.91 | 77.18 |
| Bra031242.1-P | Field mustard | nucleus | 74.26 | 76.27 |
| CDY19591 | Canola | nucleus | 73.27 | 75.51 |
| CDY37330 | Canola | nucleus | 43.89 | 73.89 |
| Bra023913.1-P | Field mustard | nucleus | 43.89 | 73.89 |
| Bra001806.1-P | Field mustard | nucleus | 73.93 | 72.73 |
| KRG98391 | Soybean | nucleus | 50.49 | 45.27 |
| KRH46473 | Soybean | nucleus | 49.51 | 44.64 |
| KRH14162 | Soybean | nucleus | 45.21 | 44.63 |
| KRH73967 | Soybean | nucleus | 45.21 | 44.63 |
| VIT_06s0004g02270.t01 | Wine grape | nucleus | 42.57 | 42.16 |
| AT5G12840.3 | Thale cress | nucleus | 36.3 | 40.44 |
| PGSC0003DMT400018959 | Potato | nucleus | 39.6 | 40.0 |
| Solyc11g065700.1.1 | Tomato | nucleus | 39.27 | 39.67 |
| PGSC0003DMT400027785 | Potato | nucleus | 38.28 | 37.42 |
| Solyc01g008490.2.1 | Tomato | nucleus | 37.95 | 36.86 |
| AT1G30500.2 | Thale cress | nucleus | 21.78 | 34.74 |
| Os03t0696300-01 | Rice | nucleus | 29.37 | 34.23 |
| TraesCS4A01G277300.1 | Wheat | nucleus | 29.37 | 33.46 |
| Zm00001d033602_P002 | Maize | nucleus | 29.04 | 33.33 |
| TraesCS4D01G033700.1 | Wheat | nucleus | 28.38 | 32.33 |
| AT2G34720.1 | Thale cress | nucleus | 20.79 | 31.82 |
| KXG37797 | Sorghum | nucleus | 27.39 | 31.09 |
| GSMUA_Achr4P03600_001 | Banana | nucleus | 29.04 | 29.53 |
| GSMUA_Achr3P29730_001 | Banana | nucleus | 31.02 | 29.38 |
| GSMUA_Achr4P11090_001 | Banana | vacuole | 32.01 | 26.5 |
| AT1G54160.1 | Thale cress | nucleus | 25.08 | 24.68 |
| AT3G14020.1 | Thale cress | nucleus | 24.75 | 24.35 |
| AT1G17590.3 | Thale cress | nucleus | 25.41 | 23.48 |
| AT1G72830.2 | Thale cress | nucleus | 26.4 | 23.46 |
| AT5G06510.2 | Thale cress | nucleus | 20.79 | 23.42 |
| AT3G05690.2 | Thale cress | mitochondrion | 21.45 | 19.58 |
Protein Annotations
| MapMan:15.5.51.1 | EntrezGene:821640 | ProteinID:AEE76439.1 | EMBL:AF412056 | ArrayExpress:AT3G20910 | EnsemblPlantsGene:AT3G20910 |
| RefSeq:AT3G20910 | TAIR:AT3G20910 | RefSeq:AT3G20910-TAIR-G | EnsemblPlants:AT3G20910.1 | TAIR:AT3G20910.1 | EMBL:AY087696 |
| EMBL:AY093971 | ProteinID:BAB01900.1 | InterPro:CCAAT-binding_factor_CS | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009555 | GO:GO:0009790 | GO:GO:0009791 |
| GO:GO:0009793 | GO:GO:0009987 | GO:GO:0010262 | GO:GO:0016602 | GO:GO:0045892 | GO:GO:0048316 |
| GO:GO:0055046 | InterPro:IPR001289 | Symbol:NF-YA9 | InterPro:NFYA | RefSeq:NP_566670.1 | PFAM:PF02045 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007115 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00616 | ScanProsite:PS00686 | PFscan:PS51152 | PANTHER:PTHR12632 |
| PANTHER:PTHR12632:SF14 | UniProt:Q945M9 | SMART:SM00521 | UniParc:UPI00000A7953 | : | : |
Description
NFYA9Nuclear transcription factor Y subunit A-9 [Source:UniProtKB/Swiss-Prot;Acc:Q945M9]
Coordinates
chr3:+:7326355..7328581
Molecular Weight (calculated)
33153.2 Da
IEP (calculated)
9.797
GRAVY (calculated)
-1.082
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIEDMHSKS DSGGNKVDSE VHGTVSSSIN SLNPWHRAAA ACNANSSVEA GDKSSKSIAL ALESNGSKSP SNRDNTVNKE SQVTTSPQSA GDYSDKNQES
101: LHHGITQPPP HPQLVGHTVG WASSNPYQDP YYAGVMGAYG HHPLGFVPYG GMPHSRMPLP PEMAQEPVFV NAKQYQAILR RRQARAKAEL EKKLIKSRKP
201: YLHESRHQHA MRRPRGTGGR FAKKTNTEAS KRKAEEKSNG HVTQSPSSSN SDQGEAWNGD YRTPQGDEMQ SSAYKRREEG ECSGQQWNSL SSNHPSQARL
301: AIK
101: LHHGITQPPP HPQLVGHTVG WASSNPYQDP YYAGVMGAYG HHPLGFVPYG GMPHSRMPLP PEMAQEPVFV NAKQYQAILR RRQARAKAEL EKKLIKSRKP
201: YLHESRHQHA MRRPRGTGGR FAKKTNTEAS KRKAEEKSNG HVTQSPSSSN SDQGEAWNGD YRTPQGDEMQ SSAYKRREEG ECSGQQWNSL SSNHPSQARL
301: AIK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.