Factsheet for GSMUA_Achr4P11090_001

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

nucleus 4
extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P03600_001	Banana	nucleus	56.28	69.13
GSMUA_Achr3P29730_001	Banana	nucleus	51.64	59.06
Zm00001d033602_P002	Maize	nucleus	31.15	43.18
Os03t0696300-01	Rice	nucleus	30.6	43.08
KXG37797	Sorghum	nucleus	31.42	43.07
Bra023913.1-P	Field mustard	nucleus	20.77	42.22
CDY37330	Canola	nucleus	20.77	42.22
TraesCS4D01G033700.1	Wheat	nucleus	29.23	40.23
TraesCS4A01G277300.1	Wheat	nucleus	29.23	40.23
GSMUA_Achr7P01070_001	Banana	nucleus	25.68	40.17
GSMUA_Achr4P31650_001	Banana	nucleus	24.86	39.91
CDX78492	Canola	nucleus	22.13	39.51
GSMUA_Achr7P07860_001	Banana	nucleus	21.31	38.81
GSMUA_Achr9P10300_001	Banana	nucleus	24.59	38.46
CDX91161	Canola	nucleus	21.31	35.62
CDX70480	Canola	nucleus	24.86	35.14
PGSC0003DMT400017698	Potato	nucleus	28.96	34.98
Solyc01g087240.2.1	Tomato	nucleus	28.69	34.65
KRH27472	Soybean	nucleus	28.69	34.65
VIT_08s0007g08250.t01	Wine grape	nucleus	33.33	34.46
Bra006165.1-P	Field mustard	nucleus	23.77	34.25
KRH20817	Soybean	nucleus	28.42	34.21
KRG98391	Soybean	nucleus	31.15	33.73
VIT_06s0004g02270.t01	Wine grape	nucleus	28.14	33.66
CDX85686	Canola	nucleus	21.58	33.47
KRH46473	Soybean	nucleus	30.6	33.33
KRH73967	Soybean	nucleus	27.87	33.22
KRH14162	Soybean	nucleus	27.6	32.9
AT5G12840.3	Thale cress	nucleus	24.32	32.72
Bra023378.1-P	Field mustard	nucleus	21.31	32.5
PGSC0003DMT400018959	Potato	nucleus	26.5	32.33
VIT_13s0064g00860.t01	Wine grape	nucleus	35.52	32.1
AT3G20910.1	Thale cress	nucleus	26.5	32.01
Solyc11g065700.1.1	Tomato	nucleus	26.23	32.0
CDX82223	Canola	nucleus	24.32	31.79
CDX97206	Canola	nucleus	24.32	31.23
Bra031242.1-P	Field mustard	nucleus	25.14	31.19
Solyc01g008490.2.1	Tomato	nucleus	26.5	31.09
PGSC0003DMT400027785	Potato	nucleus	26.23	30.97
Bra008878.1-P	Field mustard	nucleus	23.77	30.74
CDY06393	Canola	nucleus	24.86	30.54
CDY53967	Canola	nucleus	23.5	30.28
CDY32398	Canola	nucleus	24.32	29.87
CDY19591	Canola	nucleus	23.22	28.91
Bra001806.1-P	Field mustard	nucleus	24.04	28.57
GSMUA_AchrUn_...	Banana	nucleus	23.77	27.88
GSMUA_Achr8P16700_001	Banana	nucleus	21.86	27.78
GSMUA_Achr2P21730_001	Banana	nucleus	21.86	27.49
GSMUA_Achr8P30700_001	Banana	nucleus	22.4	25.87
GSMUA_Achr4P31420_001	Banana	mitochondrion, nucleus	21.86	23.74
GSMUA_Achr5P02590_001	Banana	nucleus	20.22	22.84
GSMUA_Achr4P28390_001	Banana	nucleus	19.67	22.36

Protein Annotations

MapMan:15.5.51.1	InterPro:CCAAT-binding_factor_CS	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016602
EnsemblPlantsGene:GSMUA_Achr4G11090_001	EnsemblPlants:GSMUA_Achr4P11090_001	EnsemblPlants:GSMUA_Achr4T11090_001	InterPro:IPR001289	UniProt:M0SMX4	InterPro:NFYA
PFAM:PF02045	PRINTS:PR00616	ScanProsite:PS00686	PFscan:PS51152	PANTHER:PTHR12632	PANTHER:PTHR12632:SF14
SMART:SM00521	SignalP:SignalP-noTM	UniParc:UPI000295E8BB	:	:	:

Description

Putative Nuclear transcription factor Y subunit A-9 [Source:GMGC_GENE;Acc:GSMUA_Achr4G11090_001]

Coordinates

chr4:+:7970442..7979418

Molecular Weight (calculated)

39689.4 Da

IEP (calculated)

9.080

GRAVY (calculated)

-0.405

Length

366 amino acids

Sequence
(BLAST)

001: MNRMNSRSLL YMSSVLLDLI GALDVGAAAV QLEHSSIAVS RVVFEGLHRR MESRPGGTNI LDPSVQTAIP ATISAQPWWC GPVFAAVNTS KSPVVGTEAG
101: QLRLSHGLDD TGDVNKEADN FVSLSDGGLG EKNKSLQPTS NAITSMMPEI LSPHTQLELG QSITCATYPF ADPYFAGLVA PYGTQALVHP QIIGMPHPRM
201: PLPLEMTEEP VYVNAKQYHG ILRRRQSRAK AELEKKVIKV RKPYLHESRH LHAMRRARGC GGRFLNTKKT DDGAAKTETH EGLNPSSPPL MPLAISSNSL
301: ISNCSGNADP SRIMQEGKLE SKVSVGRKEG YQEQSGSQFS QNEDYAGKQR AGILVNQPPS RAVATQ

Best Arabidopsis Sequence Match ( AT3G20910.1 )
(BLAST)

001: MGIEDMHSKS DSGGNKVDSE VHGTVSSSIN SLNPWHRAAA ACNANSSVEA GDKSSKSIAL ALESNGSKSP SNRDNTVNKE SQVTTSPQSA GDYSDKNQES
101: LHHGITQPPP HPQLVGHTVG WASSNPYQDP YYAGVMGAYG HHPLGFVPYG GMPHSRMPLP PEMAQEPVFV NAKQYQAILR RRQARAKAEL EKKLIKSRKP
201: YLHESRHQHA MRRPRGTGGR FAKKTNTEAS KRKAEEKSNG HVTQSPSSSN SDQGEAWNGD YRTPQGDEMQ SSAYKRREEG ECSGQQWNSL SSNHPSQARL
301: AIK

Arabidopsis Description

NFYA9Nuclear transcription factor Y subunit A-9 [Source:UniProtKB/Swiss-Prot;Acc:Q945M9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.