Factsheet for GSMUA_Achr7P07860_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g081840.1.1	Tomato	nucleus	30.35	39.61
CDY05192	Canola	nucleus	34.83	39.11
GSMUA_Achr4P31420_001	Banana	mitochondrion, nucleus	63.68	37.98
GSMUA_Achr4P28390_001	Banana	nucleus	60.7	37.89
PGSC0003DMT400072322	Potato	nucleus	36.82	37.76
GSMUA_Achr5P02590_001	Banana	nucleus	57.21	35.49
VIT_08s0032g01190.t01	Wine grape	nucleus	49.25	30.18
Solyc01g006930.2.1	Tomato	nucleus	45.27	29.26
PGSC0003DMT400055061	Potato	nucleus	45.27	29.26
GSMUA_Achr7P01070_001	Banana	nucleus	33.83	29.06
AT5G06510.2	Thale cress	nucleus	38.81	29.0
KRH68018	Soybean	nucleus	46.27	28.35
Zm00001d007882_P001	Maize	nucleus	41.29	28.23
GSMUA_Achr4P31650_001	Banana	nucleus	31.84	28.07
CDY18809	Canola	nucleus	37.81	27.74
Os07t0158500-00	Rice	nucleus	52.24	27.7
KRH72156	Soybean	nucleus	45.77	27.46
GSMUA_Achr9P10300_001	Banana	nucleus	31.84	27.35
CDX98930	Canola	nucleus	36.32	27.34
Bra040529.1-P	Field mustard	nucleus	37.81	27.05
KRG96274	Soybean	endoplasmic reticulum, extracellular, vacuole	46.27	26.88
Bra001164.1-P	Field mustard	nucleus	37.31	26.69
CDX70098	Canola	nucleus	35.32	26.59
Bra009200.1-P	Field mustard	nucleus	35.32	26.59
CDY14662	Canola	nucleus	36.82	26.33
CDX74133	Canola	nucleus	36.82	26.33
KRH32866	Soybean	nucleus	40.8	25.08
GSMUA_AchrUn_...	Banana	nucleus	37.81	24.36
GSMUA_Achr4P03600_001	Banana	nucleus	35.82	24.16
GSMUA_Achr8P16700_001	Banana	nucleus	33.83	23.61
OQU88458	Sorghum	nucleus	37.81	23.53
GSMUA_Achr2P21730_001	Banana	nucleus	33.83	23.37
AT3G05690.2	Thale cress	mitochondrion	38.31	23.19
GSMUA_Achr3P29730_001	Banana	nucleus	36.32	22.81
GSMUA_Achr8P30700_001	Banana	nucleus	35.82	22.71
GSMUA_Achr4P11090_001	Banana	vacuole	38.81	21.31

Protein Annotations

MapMan:15.5.51.1	InterPro:CCAAT-binding_factor_CS	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016602
EnsemblPlantsGene:GSMUA_Achr7G07860_001	EnsemblPlants:GSMUA_Achr7P07860_001	EnsemblPlants:GSMUA_Achr7T07860_001	InterPro:IPR001289	UniProt:M0TFM6	InterPro:NFYA
PFAM:PF02045	PRINTS:PR00616	ScanProsite:PS00686	PFscan:PS51152	PANTHER:PTHR12632	PANTHER:PTHR12632:SF17
SMART:SM00521	UniParc:UPI00029555EB	SEG:seg	:	:	:

Description

Putative Nuclear transcription factor Y subunit A-2 [Source:GMGC_GENE;Acc:GSMUA_Achr7G07860_001]

Coordinates

chr7:+:5846824..5851653

Molecular Weight (calculated)

22192.3 Da

IEP (calculated)

9.952

GRAVY (calculated)

-0.724

Length

201 amino acids

Sequence
(BLAST)

001: MPSFPEHSGH VELELGHSMV YPNYSYGDQC YGLYATYGPQ SMHGRMLLPM NMTADGPIYV NAKQFHGILR RRQARAKAER QNKLSKVRKP YLHESRHLHA
101: MRRARGSGGR FLNTKKESSG QVMNYGSKVK DSAPHHPTES PSSDIMKSDS GNLNSSSGGS SHLRSSFFRP LSSMIDGEQG AAGMSNQWVS AADGCCDLLK
201: V

Best Arabidopsis Sequence Match ( AT5G06510.1 )
(BLAST)

001: MQTEELLSPP QTPWWNAFGS QPLTTESLSG EASDSFTGVK AVTTEAEQGV VDKQTSTTLF TFSPGGEKSS RDVPKPHVAF AMQSACFEFG FAQPMMYTKH
101: PHVEQYYGVV SAYGSQRSSG RVMIPLKMET EEDGTIYVNS KQYHGIIRRR QSRAKAEKLS RCRKPYMHHS RHLHAMRRPR GSGGRFLNTK TADAAKQSKP
201: SNSQSSEVFH PENETINSSR EANESNLSDS AVTSMDYFLS SSAYSPGGMV MPIKWNAAAM DIGCCKLNI

Arabidopsis Description

NFYA10NF-YA10 [Source:UniProtKB/TrEMBL;Acc:A0A178URE3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.